EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000036956 (Gene tree)
Gene ID: 403066
Gene Symbol: asxl1
Alias: si:dkey-202m22.4
Full Name: ASXL transcriptional regulator 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22433 bases
Position: chr23:30730121-30752553
Accession: ZDB-GENE-091116-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000121943	HARE-HTH	PF05066.13	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000042944	-	4806	-	ENSDARP00000042943	1601 (aa)	-	F1RC47
ENSDART00000134141	-	5881	XM_001341206	ENSDARP00000121943	1619 (aa)	XP_001341242	F1Q5H5

Gene Model

Click here to download ENSDARG00000036956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000036956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000036956	asxl1	100	55.736	ENSAOCG00000007413	asxl1	100	55.350	Amphiprion_ocellaris
ENSDARG00000036956	asxl1	100	55.589	ENSACLG00000004333	asxl1	100	56.220	Astatotilapia_calliptera
ENSDARG00000036956	asxl1	52	51.587	ENSCATG00000034343	ASXL1	100	68.333	Cercocebus_atys
ENSDARG00000036956	asxl1	100	61.775	ENSELUG00000007145	asxl1	100	62.447	Esox_lucius
ENSDARG00000036956	asxl1	100	51.775	ENSFHEG00000011274	asxl1	100	51.413	Fundulus_heteroclitus
ENSDARG00000036956	asxl1	100	75.015	ENSIPUG00000022022	asxl1	100	74.774	Ictalurus_punctatus
ENSDARG00000036956	asxl1	92	47.544	ENSLOCG00000005771	asxl1	87	66.923	Lepisosteus_oculatus
ENSDARG00000036956	asxl1	52	51.587	ENSMMUG00000007117	ASXL1	100	68.333	Macaca_mulatta
ENSDARG00000036956	asxl1	53	51.587	ENSMNEG00000031201	ASXL1	100	68.333	Macaca_nemestrina
ENSDARG00000036956	asxl1	53	51.587	ENSMLEG00000024749	ASXL1	100	68.333	Mandrillus_leucophaeus
ENSDARG00000036956	asxl1	100	55.589	ENSMZEG00005018578	asxl1	100	56.220	Maylandia_zebra
ENSDARG00000036956	asxl1	100	55.189	ENSONIG00000011638	asxl1	99	56.313	Oreochromis_niloticus
ENSDARG00000036956	asxl1	52	51.587	ENSPANG00000025544	ASXL1	100	68.333	Papio_anubis
ENSDARG00000036956	asxl1	100	53.597	ENSPKIG00000018277	asxl1	100	53.475	Paramormyrops_kingsleyae
ENSDARG00000036956	asxl1	100	51.847	ENSPFOG00000017052	asxl1	100	50.610	Poecilia_formosa
ENSDARG00000036956	asxl1	100	55.595	ENSPNYG00000024124	asxl1	100	56.433	Pundamilia_nyererei
ENSDARG00000036956	asxl1	100	75.478	ENSPNAG00000021381	asxl1	100	76.077	Pygocentrus_nattereri
ENSDARG00000036956	asxl1	52	52.381	ENSRROG00000000172	ASXL1	100	68.333	Rhinopithecus_roxellana
ENSDARG00000036956	asxl1	57	72.477	ENSSARG00000001587	ASXL1	56	73.737	Sorex_araneus
ENSDARG00000036956	asxl1	92	63.579	ENSSPAG00000009330	asxl1	99	64.407	Stegastes_partitus
ENSDARG00000036956	asxl1	85	70.000	ENSTNIG00000004355	asxl1	93	55.203	Tetraodon_nigroviridis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0009887	animal organ morphogenesis	21873635.	IBA	Process
GO:0035517	PR-DUB complex	21873635.	IBA	Component
GO:0042975	peroxisome proliferator activated receptor binding	21873635.	IBA	Function
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process