EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037002 (Gene tree)
Gene ID: 564848
Gene Symbol: zgc:152968
Alias: -
Full Name: zgc:152968
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 16962 bases
Position: chr1:35985813-36002774
Accession: ZDB-GENE-061013-448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000144525	RNase_T	PF00929.24	1.8e-05	1	1
ENSDARP00000122980	RNase_T	PF00929.24	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000139636	-	4264	-	ENSDARP00000122980	1251 (aa)	-	B8JII5
ENSDART00000175902	-	2614	-	ENSDARP00000143764	770 (aa)	-	A0A286Y9X6
ENSDART00000137071	-	530	-	-	- (aa)	-	-
ENSDART00000179634	-	8619	-	ENSDARP00000144525	1217 (aa)	-	A0A286YBW3

Gene Model

Click here to download ENSDARG00000037002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037002	zgc:152968	56	60.294	ENSAPOG00000005095	zgc:152968	81	59.856	Acanthochromis_polyacanthus
ENSDARG00000037002	zgc:152968	59	62.836	ENSACIG00000002527	zgc:152968	77	62.836	Amphilophus_citrinellus
ENSDARG00000037002	zgc:152968	58	64.286	ENSAOCG00000018049	-	70	64.286	Amphiprion_ocellaris
ENSDARG00000037002	zgc:152968	64	50.000	ENSAPEG00000012559	zgc:152968	75	50.000	Amphiprion_percula
ENSDARG00000037002	zgc:152968	70	50.852	ENSACLG00000020524	-	71	63.814	Astatotilapia_calliptera
ENSDARG00000037002	zgc:152968	55	66.667	ENSCVAG00000015400	zgc:152968	72	66.667	Cyprinodon_variegatus
ENSDARG00000037002	zgc:152968	94	42.857	ENSELUG00000014272	zgc:152968	100	44.282	Esox_lucius
ENSDARG00000037002	zgc:152968	53	76.923	ENSFHEG00000003641	-	83	58.128	Fundulus_heteroclitus
ENSDARG00000037002	zgc:152968	58	68.182	ENSGAFG00000016810	-	75	68.182	Gambusia_affinis
ENSDARG00000037002	zgc:152968	67	50.000	ENSHBUG00000007524	-	77	50.000	Haplochromis_burtoni
ENSDARG00000037002	zgc:152968	61	75.556	ENSIPUG00000004633	zgc:152968	82	75.556	Ictalurus_punctatus
ENSDARG00000037002	zgc:152968	58	59.574	ENSLBEG00000026485	zgc:152968	76	59.574	Labrus_bergylta
ENSDARG00000037002	zgc:152968	69	45.221	ENSMAMG00000005920	-	76	45.328	Mastacembelus_armatus
ENSDARG00000037002	zgc:152968	70	50.994	ENSMZEG00005013783	-	71	62.774	Maylandia_zebra
ENSDARG00000037002	zgc:152968	70	64.691	ENSMMOG00000018072	zgc:152968	99	58.079	Mola_mola
ENSDARG00000037002	zgc:152968	57	58.167	ENSMALG00000003536	-	71	58.367	Monopterus_albus
ENSDARG00000037002	zgc:152968	70	51.067	ENSONIG00000016897	-	82	50.623	Oreochromis_niloticus
ENSDARG00000037002	zgc:152968	69	50.896	ENSORLG00020012504	-	83	50.966	Oryzias_latipes_hni
ENSDARG00000037002	zgc:152968	71	46.728	ENSOMEG00000008840	-	87	46.728	Oryzias_melastigma
ENSDARG00000037002	zgc:152968	72	49.284	ENSPFOG00000006104	-	83	50.872	Poecilia_formosa
ENSDARG00000037002	zgc:152968	53	63.547	ENSPLAG00000005034	-	72	62.264	Poecilia_latipinna
ENSDARG00000037002	zgc:152968	70	49.062	ENSPMEG00000018012	-	81	50.000	Poecilia_mexicana
ENSDARG00000037002	zgc:152968	72	50.440	ENSPREG00000007481	-	83	50.825	Poecilia_reticulata
ENSDARG00000037002	zgc:152968	53	54.824	ENSSFOG00015023869	zgc:152968	66	65.777	Scleropages_formosus
ENSDARG00000037002	zgc:152968	71	50.877	ENSSMAG00000008149	-	80	50.568	Scophthalmus_maximus
ENSDARG00000037002	zgc:152968	68	55.189	ENSSDUG00000022323	-	76	54.755	Seriola_dumerili
ENSDARG00000037002	zgc:152968	64	52.512	ENSSLDG00000018799	zgc:152968	71	52.133	Seriola_lalandi_dorsalis
ENSDARG00000037002	zgc:152968	66	49.842	ENSSPAG00000007632	-	71	56.031	Stegastes_partitus
ENSDARG00000037002	zgc:152968	73	49.659	ENSTRUG00000025441	zgc:152968	83	49.930	Takifugu_rubripes
ENSDARG00000037002	zgc:152968	71	47.315	ENSXMAG00000026483	-	82	47.688	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function