EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037109 (Gene tree)
Gene ID: 266990
Gene Symbol: pwp2h
Alias: cb471|titania|tti|zgc:56063
Full Name: PWP2%2C small subunit processome component
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 51422 bases
Position: chr1:28898945-28950366
Accession: ZDB-GENE-021031-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000101591	Utp12	PF04003.12	1.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000143863	-	695	-	-	- (aa)	-	-
ENSDART00000110270	-	3435	-	ENSDARP00000101591	937 (aa)	-	F1RAC4

Gene Model

Click here to download ENSDARG00000037109's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037109	pwp2h	96	67.670	ENSG00000241945	PWP2	98	67.398	Homo_sapiens
ENSDARG00000037109	pwp2h	96	76.529	ENSAPOG00000021522	pwp2h	100	75.591	Acanthochromis_polyacanthus
ENSDARG00000037109	pwp2h	97	66.447	ENSAMEG00000010907	-	98	66.777	Ailuropoda_melanoleuca
ENSDARG00000037109	pwp2h	96	76.556	ENSACIG00000024109	pwp2h	100	75.054	Amphilophus_citrinellus
ENSDARG00000037109	pwp2h	97	76.503	ENSAOCG00000014853	pwp2h	100	76.103	Amphiprion_ocellaris
ENSDARG00000037109	pwp2h	96	77.137	ENSAPEG00000008152	pwp2h	100	75.996	Amphiprion_percula
ENSDARG00000037109	pwp2h	96	75.724	ENSATEG00000015493	pwp2h	100	76.888	Anabas_testudineus
ENSDARG00000037109	pwp2h	95	70.201	ENSAPLG00000010371	-	99	68.947	Anas_platyrhynchos
ENSDARG00000037109	pwp2h	99	66.845	ENSACAG00000017861	-	99	66.845	Anolis_carolinensis
ENSDARG00000037109	pwp2h	96	66.964	ENSANAG00000034845	-	98	66.521	Aotus_nancymaae
ENSDARG00000037109	pwp2h	96	77.171	ENSACLG00000011425	pwp2h	100	75.054	Astatotilapia_calliptera
ENSDARG00000037109	pwp2h	97	81.243	ENSAMXG00000007988	pwp2h	99	80.576	Astyanax_mexicanus
ENSDARG00000037109	pwp2h	97	67.475	ENSBTAG00000007105	-	98	67.424	Bos_taurus
ENSDARG00000037109	pwp2h	95	38.699	WBGene00018891	F55F8.3	98	38.323	Caenorhabditis_elegans
ENSDARG00000037109	pwp2h	96	67.188	ENSCJAG00000005570	-	98	66.667	Callithrix_jacchus
ENSDARG00000037109	pwp2h	97	66.630	ENSCAFG00000010687	-	98	67.179	Canis_familiaris
ENSDARG00000037109	pwp2h	80	66.932	ENSCAFG00020019199	-	88	67.596	Canis_lupus_dingo
ENSDARG00000037109	pwp2h	96	64.595	ENSCHIG00000026362	-	98	64.239	Capra_hircus
ENSDARG00000037109	pwp2h	97	66.411	ENSTSYG00000009022	-	98	67.179	Carlito_syrichta
ENSDARG00000037109	pwp2h	98	66.157	ENSCAPG00000017934	-	98	67.182	Cavia_aperea
ENSDARG00000037109	pwp2h	98	66.161	ENSCPOG00000023616	-	98	66.703	Cavia_porcellus
ENSDARG00000037109	pwp2h	96	66.964	ENSCCAG00000034616	-	98	66.667	Cebus_capucinus
ENSDARG00000037109	pwp2h	96	67.559	ENSCATG00000032550	-	98	67.398	Cercocebus_atys
ENSDARG00000037109	pwp2h	96	67.559	ENSCLAG00000009503	-	97	68.040	Chinchilla_lanigera
ENSDARG00000037109	pwp2h	96	67.336	ENSCSAG00000007903	-	98	67.104	Chlorocebus_sabaeus
ENSDARG00000037109	pwp2h	96	69.556	ENSCPBG00000018335	-	99	68.709	Chrysemys_picta_bellii
ENSDARG00000037109	pwp2h	95	56.292	ENSCSAVG00000004186	-	97	56.292	Ciona_savignyi
ENSDARG00000037109	pwp2h	96	67.224	ENSCANG00000028013	-	98	67.213	Colobus_angolensis_palliatus
ENSDARG00000037109	pwp2h	97	66.740	ENSCGRG00001020074	Pwp2	99	66.058	Cricetulus_griseus_chok1gshd
ENSDARG00000037109	pwp2h	97	66.740	ENSCGRG00000003750	Pwp2	99	66.058	Cricetulus_griseus_crigri
ENSDARG00000037109	pwp2h	96	74.833	ENSCSEG00000000861	pwp2h	99	74.058	Cynoglossus_semilaevis
ENSDARG00000037109	pwp2h	98	75.054	ENSCVAG00000000996	pwp2h	99	75.381	Cyprinodon_variegatus
ENSDARG00000037109	pwp2h	83	67.696	ENSDNOG00000012128	-	99	67.044	Dasypus_novemcinctus
ENSDARG00000037109	pwp2h	91	63.146	ENSDORG00000003015	Pwp2	94	62.756	Dipodomys_ordii
ENSDARG00000037109	pwp2h	97	46.146	FBgn0033557	CG12325	97	46.467	Drosophila_melanogaster
ENSDARG00000037109	pwp2h	85	63.363	ENSEBUG00000003140	pwp2h	97	62.500	Eptatretus_burgeri
ENSDARG00000037109	pwp2h	97	68.137	ENSEASG00005001651	-	98	67.970	Equus_asinus_asinus
ENSDARG00000037109	pwp2h	97	68.247	ENSECAG00000006090	-	98	67.570	Equus_caballus
ENSDARG00000037109	pwp2h	99	76.426	ENSELUG00000001878	pwp2h	99	76.857	Esox_lucius
ENSDARG00000037109	pwp2h	96	67.592	ENSFCAG00000004487	-	99	66.919	Felis_catus
ENSDARG00000037109	pwp2h	99	67.279	ENSFALG00000012300	-	100	67.495	Ficedula_albicollis
ENSDARG00000037109	pwp2h	97	66.519	ENSFDAG00000016140	-	100	66.235	Fukomys_damarensis
ENSDARG00000037109	pwp2h	93	76.087	ENSFHEG00000009078	pwp2h	100	76.316	Fundulus_heteroclitus
ENSDARG00000037109	pwp2h	95	75.112	ENSGMOG00000016522	pwp2h	99	73.305	Gadus_morhua
ENSDARG00000037109	pwp2h	99	68.649	ENSGALG00000045726	-	99	68.649	Gallus_gallus
ENSDARG00000037109	pwp2h	99	74.893	ENSGAFG00000011340	pwp2h	100	75.321	Gambusia_affinis
ENSDARG00000037109	pwp2h	96	75.612	ENSGACG00000014928	pwp2h	99	74.703	Gasterosteus_aculeatus
ENSDARG00000037109	pwp2h	97	69.003	ENSGAGG00000005377	-	99	69.003	Gopherus_agassizii
ENSDARG00000037109	pwp2h	96	67.670	ENSGGOG00000041875	-	98	66.850	Gorilla_gorilla
ENSDARG00000037109	pwp2h	96	77.394	ENSHBUG00000005530	pwp2h	100	75.268	Haplochromis_burtoni
ENSDARG00000037109	pwp2h	98	66.376	ENSHGLG00000017401	-	99	66.703	Heterocephalus_glaber_female
ENSDARG00000037109	pwp2h	98	65.867	ENSHGLG00100013888	-	99	66.196	Heterocephalus_glaber_male
ENSDARG00000037109	pwp2h	97	72.607	ENSHCOG00000018121	pwp2h	97	71.706	Hippocampus_comes
ENSDARG00000037109	pwp2h	99	80.819	ENSIPUG00000014074	pwp2h	100	80.927	Ictalurus_punctatus
ENSDARG00000037109	pwp2h	99	65.702	ENSSTOG00000014194	-	99	65.991	Ictidomys_tridecemlineatus
ENSDARG00000037109	pwp2h	98	66.812	ENSJJAG00000013039	Pwp2	98	66.957	Jaculus_jaculus
ENSDARG00000037109	pwp2h	96	75.390	ENSKMAG00000003143	pwp2h	100	74.246	Kryptolebias_marmoratus
ENSDARG00000037109	pwp2h	96	74.722	ENSLBEG00000006388	pwp2h	99	74.376	Labrus_bergylta
ENSDARG00000037109	pwp2h	93	65.721	ENSLACG00000006084	pwp2h	99	65.721	Latimeria_chalumnae
ENSDARG00000037109	pwp2h	100	70.170	ENSLOCG00000003663	pwp2h	100	70.170	Lepisosteus_oculatus
ENSDARG00000037109	pwp2h	93	68.078	ENSLAFG00000003871	-	100	68.764	Loxodonta_africana
ENSDARG00000037109	pwp2h	96	67.447	ENSMFAG00000044448	-	98	67.289	Macaca_fascicularis
ENSDARG00000037109	pwp2h	96	67.447	ENSMMUG00000005271	PWP2	98	67.289	Macaca_mulatta
ENSDARG00000037109	pwp2h	96	67.559	ENSMNEG00000030782	-	98	67.398	Macaca_nemestrina
ENSDARG00000037109	pwp2h	96	67.559	ENSMLEG00000039860	-	98	67.398	Mandrillus_leucophaeus
ENSDARG00000037109	pwp2h	96	77.283	ENSMAMG00000022327	pwp2h	100	75.591	Mastacembelus_armatus
ENSDARG00000037109	pwp2h	96	77.060	ENSMZEG00005015448	pwp2h	100	74.946	Maylandia_zebra
ENSDARG00000037109	pwp2h	98	62.080	ENSMGAG00000014596	-	98	62.080	Meleagris_gallopavo
ENSDARG00000037109	pwp2h	89	38.444	ENSMAUG00000020265	Pwp2	91	53.991	Mesocricetus_auratus
ENSDARG00000037109	pwp2h	98	67.213	ENSMICG00000001002	-	98	67.538	Microcebus_murinus
ENSDARG00000037109	pwp2h	97	66.228	ENSMOCG00000003844	Pwp2	98	66.740	Microtus_ochrogaster
ENSDARG00000037109	pwp2h	95	72.472	ENSMMOG00000000882	pwp2h	100	72.921	Mola_mola
ENSDARG00000037109	pwp2h	97	66.922	ENSMODG00000021081	-	100	66.990	Monodelphis_domestica
ENSDARG00000037109	pwp2h	99	75.350	ENSMALG00000000821	pwp2h	100	75.996	Monopterus_albus
ENSDARG00000037109	pwp2h	97	66.447	MGP_CAROLIEiJ_G0015505	Pwp2	99	66.523	Mus_caroli
ENSDARG00000037109	pwp2h	97	66.557	ENSMUSG00000032834	Pwp2	99	66.272	Mus_musculus
ENSDARG00000037109	pwp2h	98	65.980	MGP_PahariEiJ_G0030918	Pwp2	98	66.197	Mus_pahari
ENSDARG00000037109	pwp2h	97	66.667	MGP_SPRETEiJ_G0016318	Pwp2	99	66.415	Mus_spretus
ENSDARG00000037109	pwp2h	83	67.692	ENSMPUG00000009936	-	97	67.509	Mustela_putorius_furo
ENSDARG00000037109	pwp2h	98	62.268	ENSMLUG00000004823	-	98	62.555	Myotis_lucifugus
ENSDARG00000037109	pwp2h	98	66.056	ENSNGAG00000021106	Pwp2	99	66.379	Nannospalax_galili
ENSDARG00000037109	pwp2h	96	75.904	ENSNBRG00000016527	pwp2h	100	74.055	Neolamprologus_brichardi
ENSDARG00000037109	pwp2h	96	66.667	ENSNLEG00000001928	-	99	67.113	Nomascus_leucogenys
ENSDARG00000037109	pwp2h	97	66.777	ENSODEG00000013073	-	98	67.033	Octodon_degus
ENSDARG00000037109	pwp2h	96	77.394	ENSONIG00000007136	pwp2h	100	75.268	Oreochromis_niloticus
ENSDARG00000037109	pwp2h	96	68.556	ENSOANG00000006477	-	97	68.778	Ornithorhynchus_anatinus
ENSDARG00000037109	pwp2h	98	73.536	ENSORLG00000000066	pwp2h	99	74.187	Oryzias_latipes
ENSDARG00000037109	pwp2h	98	73.644	ENSORLG00020000321	pwp2h	99	74.295	Oryzias_latipes_hni
ENSDARG00000037109	pwp2h	98	69.414	ENSORLG00015014731	pwp2h	99	70.065	Oryzias_latipes_hsok
ENSDARG00000037109	pwp2h	95	76.721	ENSOMEG00000020671	pwp2h	75	76.721	Oryzias_melastigma
ENSDARG00000037109	pwp2h	96	67.670	ENSOGAG00000012473	-	99	67.508	Otolemur_garnettii
ENSDARG00000037109	pwp2h	96	65.517	ENSOARG00000011672	-	98	67.380	Ovis_aries
ENSDARG00000037109	pwp2h	96	67.447	ENSPPAG00000037874	-	98	67.179	Pan_paniscus
ENSDARG00000037109	pwp2h	96	68.036	ENSPPRG00000011088	-	99	67.459	Panthera_pardus
ENSDARG00000037109	pwp2h	96	60.442	ENSPTIG00000020872	-	99	59.978	Panthera_tigris_altaica
ENSDARG00000037109	pwp2h	96	67.447	ENSPTRG00000013969	-	98	67.179	Pan_troglodytes
ENSDARG00000037109	pwp2h	96	67.559	ENSPANG00000006267	-	98	67.618	Papio_anubis
ENSDARG00000037109	pwp2h	98	72.240	ENSPKIG00000002693	pwp2h	100	75.412	Paramormyrops_kingsleyae
ENSDARG00000037109	pwp2h	96	69.556	ENSPSIG00000009783	-	99	68.709	Pelodiscus_sinensis
ENSDARG00000037109	pwp2h	96	76.700	ENSPMGG00000022349	pwp2h	100	74.919	Periophthalmus_magnuspinnatus
ENSDARG00000037109	pwp2h	96	67.224	ENSPEMG00000009968	Pwp2	98	67.398	Peromyscus_maniculatus_bairdii
ENSDARG00000037109	pwp2h	98	65.983	ENSPCIG00000014548	-	99	66.667	Phascolarctos_cinereus
ENSDARG00000037109	pwp2h	96	75.637	ENSPFOG00000014764	pwp2h	99	74.620	Poecilia_formosa
ENSDARG00000037109	pwp2h	96	75.969	ENSPLAG00000011559	pwp2h	99	74.946	Poecilia_latipinna
ENSDARG00000037109	pwp2h	96	75.111	ENSPMEG00000021347	pwp2h	99	74.620	Poecilia_mexicana
ENSDARG00000037109	pwp2h	96	76.339	ENSPREG00000015887	pwp2h	99	74.837	Poecilia_reticulata
ENSDARG00000037109	pwp2h	96	67.447	ENSPPYG00000011478	-	98	67.069	Pongo_abelii
ENSDARG00000037109	pwp2h	98	64.629	ENSPCAG00000004676	-	98	64.629	Procavia_capensis
ENSDARG00000037109	pwp2h	96	67.706	ENSPCOG00000012856	-	98	67.432	Propithecus_coquereli
ENSDARG00000037109	pwp2h	98	61.749	ENSPVAG00000002312	-	98	61.749	Pteropus_vampyrus
ENSDARG00000037109	pwp2h	74	76.437	ENSPNYG00000008379	pwp2h	99	73.770	Pundamilia_nyererei
ENSDARG00000037109	pwp2h	96	83.556	ENSPNAG00000017876	pwp2h	99	81.692	Pygocentrus_nattereri
ENSDARG00000037109	pwp2h	97	66.081	ENSRNOG00000001210	Pwp2	98	66.667	Rattus_norvegicus
ENSDARG00000037109	pwp2h	96	67.113	ENSRBIG00000034365	-	98	66.521	Rhinopithecus_bieti
ENSDARG00000037109	pwp2h	96	67.224	ENSRROG00000031946	-	98	66.630	Rhinopithecus_roxellana
ENSDARG00000037109	pwp2h	92	43.414	YCR057C	PWP2	95	41.524	Saccharomyces_cerevisiae
ENSDARG00000037109	pwp2h	95	66.256	ENSSBOG00000034554	-	97	66.484	Saimiri_boliviensis_boliviensis
ENSDARG00000037109	pwp2h	98	76.522	ENSSFOG00015003316	pwp2	99	76.840	Scleropages_formosus
ENSDARG00000037109	pwp2h	96	77.232	ENSSMAG00000011839	pwp2h	99	75.647	Scophthalmus_maximus
ENSDARG00000037109	pwp2h	96	76.633	ENSSDUG00000011462	pwp2h	99	75.536	Seriola_dumerili
ENSDARG00000037109	pwp2h	96	76.503	ENSSLDG00000008651	pwp2h	98	76.279	Seriola_lalandi_dorsalis
ENSDARG00000037109	pwp2h	97	68.057	ENSSPUG00000002980	-	100	68.057	Sphenodon_punctatus
ENSDARG00000037109	pwp2h	96	77.283	ENSSPAG00000023368	pwp2h	100	75.565	Stegastes_partitus
ENSDARG00000037109	pwp2h	98	66.594	ENSSSCG00000029627	-	98	66.812	Sus_scrofa
ENSDARG00000037109	pwp2h	96	68.750	ENSTGUG00000005996	-	100	68.973	Taeniopygia_guttata
ENSDARG00000037109	pwp2h	60	66.726	ENSTGUG00000018216	-	99	66.726	Taeniopygia_guttata
ENSDARG00000037109	pwp2h	98	73.856	ENSTRUG00000013258	pwp2h	99	73.856	Takifugu_rubripes
ENSDARG00000037109	pwp2h	98	72.767	ENSTNIG00000010613	pwp2h	99	72.767	Tetraodon_nigroviridis
ENSDARG00000037109	pwp2h	81	69.373	ENSTBEG00000015597	-	89	70.295	Tupaia_belangeri
ENSDARG00000037109	pwp2h	93	67.735	ENSTTRG00000006728	-	100	67.735	Tursiops_truncatus
ENSDARG00000037109	pwp2h	96	67.220	ENSUAMG00000019031	-	99	67.677	Ursus_americanus
ENSDARG00000037109	pwp2h	96	65.033	ENSUMAG00000025481	-	97	65.088	Ursus_maritimus
ENSDARG00000037109	pwp2h	97	66.630	ENSVVUG00000024125	-	99	66.342	Vulpes_vulpes
ENSDARG00000037109	pwp2h	68	53.297	ENSXETG00000018002	pwp2	89	53.297	Xenopus_tropicalis
ENSDARG00000037109	pwp2h	96	71.987	ENSXCOG00000020474	pwp2h	100	70.721	Xiphophorus_couchianus
ENSDARG00000037109	pwp2h	99	74.381	ENSXMAG00000008124	pwp2h	100	74.812	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0000028	ribosomal small subunit assembly	23408911.	IMP	Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	23408911.	IMP	Process
GO:0055123	digestive system development	23408911.	IMP	Process