EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037177 (Gene tree)
Gene ID: 560041
Gene Symbol: zc3h13
Alias: zgc:66359
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 31183 bases
Position: chr1:29766725-29797907
Accession: ZDB-GENE-040426-1619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000054063	zf-CCCH	PF00642.24	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000054064	-	5966	-	ENSDARP00000054063	1759 (aa)	-	B0S5D8

Gene Model

Click here to download ENSDARG00000037177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037177	zc3h13	50	56.522	ENSATEG00000003937	zc3h13	51	56.486	Anabas_testudineus
ENSDARG00000037177	zc3h13	91	55.629	ENSAPLG00000002707	ZC3H13	62	72.683	Anas_platyrhynchos
ENSDARG00000037177	zc3h13	50	55.579	ENSACLG00000027909	zc3h13	51	56.373	Astatotilapia_calliptera
ENSDARG00000037177	zc3h13	51	44.245	ENSCPOG00000000646	ZC3H13	51	42.492	Cavia_porcellus
ENSDARG00000037177	zc3h13	51	43.201	ENSCLAG00000000610	ZC3H13	51	41.372	Chinchilla_lanigera
ENSDARG00000037177	zc3h13	80	64.179	ENSGACG00000015166	zc3h13	73	76.549	Gasterosteus_aculeatus
ENSDARG00000037177	zc3h13	50	56.128	ENSHBUG00000007100	zc3h13	51	56.198	Haplochromis_burtoni
ENSDARG00000037177	zc3h13	71	68.873	ENSKMAG00000010701	zc3h13	98	55.617	Kryptolebias_marmoratus
ENSDARG00000037177	zc3h13	50	56.153	ENSMZEG00005007473	zc3h13	51	56.328	Maylandia_zebra
ENSDARG00000037177	zc3h13	71	70.936	ENSPMEG00000006928	zc3h13	51	54.316	Poecilia_mexicana
ENSDARG00000037177	zc3h13	63	69.099	ENSPCAG00000001146	ZC3H13	72	72.464	Procavia_capensis
ENSDARG00000037177	zc3h13	56	63.362	ENSSPUG00000013358	ZC3H13	60	63.362	Sphenodon_punctatus
ENSDARG00000037177	zc3h13	66	69.501	ENSTNIG00000014523	zc3h13	90	56.075	Tetraodon_nigroviridis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function