EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037229 (Gene tree)
Gene ID: 436970
Gene Symbol: denr
Alias: im:6891640|zgc:113309|zgc:92629
Full Name: density-regulated protein
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7635 bases
Position: chr10:44437080-44444714
Accession: ZDB-GENE-040718-450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000054152	SUI1	PF01253.22	6.8e-16	1	1
ENSDARP00000149057	SUI1	PF01253.22	6.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000181517	-	2262	-	ENSDARP00000149057	208 (aa)	-	Q6DH65
ENSDART00000054153	-	2187	-	ENSDARP00000054152	208 (aa)	-	Q6DH65

Gene Model

Click here to download ENSDARG00000037229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037229	denr	96	78.894	ENSG00000139726	DENR	93	77.387	Homo_sapiens
ENSDARG00000037229	denr	100	80.000	ENSAPOG00000021065	denr	100	80.000	Acanthochromis_polyacanthus
ENSDARG00000037229	denr	97	71.981	ENSAMEG00000014851	DENR	96	72.464	Ailuropoda_melanoleuca
ENSDARG00000037229	denr	91	84.293	ENSACIG00000007705	denr	100	81.043	Amphilophus_citrinellus
ENSDARG00000037229	denr	100	80.000	ENSAOCG00000004767	denr	100	80.000	Amphiprion_ocellaris
ENSDARG00000037229	denr	100	79.524	ENSAPEG00000006323	denr	100	79.524	Amphiprion_percula
ENSDARG00000037229	denr	100	79.245	ENSATEG00000004198	denr	100	79.245	Anabas_testudineus
ENSDARG00000037229	denr	91	81.579	ENSAPLG00000003750	DENR	89	79.474	Anas_platyrhynchos
ENSDARG00000037229	denr	98	77.295	ENSACAG00000016012	DENR	99	75.362	Anolis_carolinensis
ENSDARG00000037229	denr	90	64.362	ENSANAG00000011753	-	91	62.766	Aotus_nancymaae
ENSDARG00000037229	denr	96	78.894	ENSANAG00000033479	-	93	77.387	Aotus_nancymaae
ENSDARG00000037229	denr	100	80.952	ENSACLG00000024786	denr	100	80.952	Astatotilapia_calliptera
ENSDARG00000037229	denr	100	88.095	ENSAMXG00000019387	denr	100	90.000	Astyanax_mexicanus
ENSDARG00000037229	denr	90	81.818	ENSBTAG00000049723	DENR	97	75.122	Bos_taurus
ENSDARG00000037229	denr	90	81.818	ENSBTAG00000032433	DENR	97	75.122	Bos_taurus
ENSDARG00000037229	denr	89	41.935	WBGene00012932	Y47D3A.21	89	44.565	Caenorhabditis_elegans
ENSDARG00000037229	denr	78	62.963	ENSCJAG00000042372	-	92	61.111	Callithrix_jacchus
ENSDARG00000037229	denr	96	78.894	ENSCJAG00000020488	DENR	93	77.387	Callithrix_jacchus
ENSDARG00000037229	denr	97	77.073	ENSCAFG00000032380	DENR	70	75.610	Canis_familiaris
ENSDARG00000037229	denr	97	77.073	ENSCAFG00020016334	DENR	97	75.610	Canis_lupus_dingo
ENSDARG00000037229	denr	90	81.818	ENSCHIG00000025489	DENR	97	75.122	Capra_hircus
ENSDARG00000037229	denr	96	77.387	ENSTSYG00000028003	-	93	75.879	Carlito_syrichta
ENSDARG00000037229	denr	96	74.874	ENSTSYG00000035451	-	93	73.367	Carlito_syrichta
ENSDARG00000037229	denr	84	78.161	ENSCAPG00000002873	DENR	100	76.437	Cavia_aperea
ENSDARG00000037229	denr	96	76.884	ENSCPOG00000031356	DENR	93	75.377	Cavia_porcellus
ENSDARG00000037229	denr	99	57.005	ENSCCAG00000033248	-	100	55.556	Cebus_capucinus
ENSDARG00000037229	denr	92	71.204	ENSCCAG00000026516	-	92	69.634	Cebus_capucinus
ENSDARG00000037229	denr	92	80.208	ENSCATG00000032375	-	91	78.646	Cercocebus_atys
ENSDARG00000037229	denr	91	79.474	ENSCLAG00000014586	DENR	93	76.142	Chinchilla_lanigera
ENSDARG00000037229	denr	79	81.098	ENSCSAG00000002095	DENR	100	79.268	Chlorocebus_sabaeus
ENSDARG00000037229	denr	91	67.016	ENSCHOG00000011505	DENR	90	67.016	Choloepus_hoffmanni
ENSDARG00000037229	denr	99	77.404	ENSCPBG00000026018	DENR	99	75.481	Chrysemys_picta_bellii
ENSDARG00000037229	denr	89	52.128	ENSCING00000022096	-	85	50.777	Ciona_intestinalis
ENSDARG00000037229	denr	89	48.947	ENSCSAVG00000008066	-	85	48.387	Ciona_savignyi
ENSDARG00000037229	denr	100	74.286	ENSCGRG00001022427	Denr	100	72.857	Cricetulus_griseus_chok1gshd
ENSDARG00000037229	denr	100	74.286	ENSCGRG00000014376	Denr	100	72.857	Cricetulus_griseus_crigri
ENSDARG00000037229	denr	100	79.812	ENSCSEG00000012090	denr	100	79.812	Cynoglossus_semilaevis
ENSDARG00000037229	denr	100	84.038	ENSCVAG00000006732	denr	100	83.810	Cyprinodon_variegatus
ENSDARG00000037229	denr	79	80.488	ENSDNOG00000001447	DENR	100	78.659	Dasypus_novemcinctus
ENSDARG00000037229	denr	97	73.659	ENSDNOG00000036413	-	97	72.195	Dasypus_novemcinctus
ENSDARG00000037229	denr	88	45.946	FBgn0030802	DENR	87	47.027	Drosophila_melanogaster
ENSDARG00000037229	denr	94	64.286	ENSETEG00000013029	DENR	52	96.040	Echinops_telfairi
ENSDARG00000037229	denr	97	77.561	ENSEASG00005012513	DENR	97	76.098	Equus_asinus_asinus
ENSDARG00000037229	denr	90	81.818	ENSECAG00000021824	DENR	70	76.098	Equus_caballus
ENSDARG00000037229	denr	100	80.374	ENSELUG00000002656	denr	100	80.374	Esox_lucius
ENSDARG00000037229	denr	90	82.353	ENSFCAG00000006126	DENR	88	80.749	Felis_catus
ENSDARG00000037229	denr	99	75.000	ENSFALG00000009235	DENR	99	75.481	Ficedula_albicollis
ENSDARG00000037229	denr	96	76.884	ENSFDAG00000016899	-	93	75.377	Fukomys_damarensis
ENSDARG00000037229	denr	92	60.733	ENSFDAG00000018403	-	92	59.686	Fukomys_damarensis
ENSDARG00000037229	denr	100	83.886	ENSFHEG00000007729	denr	100	83.886	Fundulus_heteroclitus
ENSDARG00000037229	denr	100	76.526	ENSGMOG00000017892	denr	100	77.934	Gadus_morhua
ENSDARG00000037229	denr	99	76.923	ENSGALG00000003795	DENR	90	79.474	Gallus_gallus
ENSDARG00000037229	denr	100	81.043	ENSGAFG00000004297	denr	100	81.043	Gambusia_affinis
ENSDARG00000037229	denr	100	79.343	ENSGACG00000015614	denr	100	79.343	Gasterosteus_aculeatus
ENSDARG00000037229	denr	99	77.404	ENSGAGG00000023819	DENR	99	75.481	Gopherus_agassizii
ENSDARG00000037229	denr	96	78.894	ENSGGOG00000005562	DENR	93	77.387	Gorilla_gorilla
ENSDARG00000037229	denr	100	82.160	ENSHBUG00000011606	denr	100	82.160	Haplochromis_burtoni
ENSDARG00000037229	denr	96	76.884	ENSHGLG00000009606	DENR	93	75.377	Heterocephalus_glaber_female
ENSDARG00000037229	denr	96	76.884	ENSHGLG00100019201	DENR	93	75.377	Heterocephalus_glaber_male
ENSDARG00000037229	denr	100	81.250	ENSHCOG00000003310	denr	100	75.481	Hippocampus_comes
ENSDARG00000037229	denr	100	89.423	ENSIPUG00000016199	denr	100	89.423	Ictalurus_punctatus
ENSDARG00000037229	denr	100	75.117	ENSSTOG00000014128	DENR	99	74.519	Ictidomys_tridecemlineatus
ENSDARG00000037229	denr	90	78.075	ENSJJAG00000008721	-	93	78.075	Jaculus_jaculus
ENSDARG00000037229	denr	79	65.680	ENSJJAG00000013822	-	92	63.905	Jaculus_jaculus
ENSDARG00000037229	denr	100	74.286	ENSJJAG00000012558	-	100	72.857	Jaculus_jaculus
ENSDARG00000037229	denr	100	84.211	ENSKMAG00000008452	denr	100	84.211	Kryptolebias_marmoratus
ENSDARG00000037229	denr	91	83.420	ENSLBEG00000021674	denr	100	80.751	Labrus_bergylta
ENSDARG00000037229	denr	61	84.252	ENSLACG00000022178	DENR	77	94.059	Latimeria_chalumnae
ENSDARG00000037229	denr	100	84.286	ENSLOCG00000005501	denr	100	85.714	Lepisosteus_oculatus
ENSDARG00000037229	denr	98	72.947	ENSLAFG00000031728	DENR	99	71.981	Loxodonta_africana
ENSDARG00000037229	denr	92	80.208	ENSMFAG00000038312	DENR	91	78.646	Macaca_fascicularis
ENSDARG00000037229	denr	92	80.208	ENSMMUG00000046801	DENR	91	78.646	Macaca_mulatta
ENSDARG00000037229	denr	62	67.188	ENSMNEG00000030944	-	79	61.905	Macaca_nemestrina
ENSDARG00000037229	denr	92	80.208	ENSMNEG00000034844	-	91	78.646	Macaca_nemestrina
ENSDARG00000037229	denr	92	80.208	ENSMLEG00000032214	DENR	91	78.646	Mandrillus_leucophaeus
ENSDARG00000037229	denr	91	83.684	ENSMAMG00000011386	denr	100	80.476	Mastacembelus_armatus
ENSDARG00000037229	denr	100	80.952	ENSMZEG00005007982	denr	100	80.952	Maylandia_zebra
ENSDARG00000037229	denr	99	76.923	ENSMGAG00000003720	DENR	89	79.474	Meleagris_gallopavo
ENSDARG00000037229	denr	100	65.714	ENSMAUG00000020940	Denr	100	58.879	Mesocricetus_auratus
ENSDARG00000037229	denr	96	78.894	ENSMICG00000046263	DENR	98	74.641	Microcebus_murinus
ENSDARG00000037229	denr	100	74.762	ENSMOCG00000019231	Denr	100	73.333	Microtus_ochrogaster
ENSDARG00000037229	denr	100	76.667	ENSMMOG00000009357	denr	100	76.667	Mola_mola
ENSDARG00000037229	denr	99	76.442	ENSMODG00000012302	DENR	99	74.519	Monodelphis_domestica
ENSDARG00000037229	denr	91	86.316	ENSMALG00000018416	denr	100	82.857	Monopterus_albus
ENSDARG00000037229	denr	100	75.714	MGP_CAROLIEiJ_G0027737	Denr	100	74.286	Mus_caroli
ENSDARG00000037229	denr	100	75.714	ENSMUSG00000023106	Denr	100	74.286	Mus_musculus
ENSDARG00000037229	denr	92	80.208	MGP_PahariEiJ_G0024317	Denr	91	78.646	Mus_pahari
ENSDARG00000037229	denr	100	75.714	MGP_SPRETEiJ_G0028735	Denr	100	74.286	Mus_spretus
ENSDARG00000037229	denr	97	73.171	ENSMPUG00000001826	DENR	71	72.683	Mustela_putorius_furo
ENSDARG00000037229	denr	97	77.295	ENSMLUG00000002088	DENR	98	72.683	Myotis_lucifugus
ENSDARG00000037229	denr	100	75.238	ENSNGAG00000013775	Denr	100	73.810	Nannospalax_galili
ENSDARG00000037229	denr	100	82.857	ENSNBRG00000018898	denr	100	82.857	Neolamprologus_brichardi
ENSDARG00000037229	denr	96	78.894	ENSNLEG00000029880	DENR	93	77.387	Nomascus_leucogenys
ENSDARG00000037229	denr	95	73.367	ENSODEG00000009408	-	91	71.859	Octodon_degus
ENSDARG00000037229	denr	96	56.784	ENSODEG00000006563	-	91	56.784	Octodon_degus
ENSDARG00000037229	denr	83	73.410	ENSODEG00000005378	-	87	72.254	Octodon_degus
ENSDARG00000037229	denr	100	81.690	ENSONIG00000015319	denr	100	81.690	Oreochromis_niloticus
ENSDARG00000037229	denr	90	81.481	ENSOANG00000011417	-	89	75.401	Ornithorhynchus_anatinus
ENSDARG00000037229	denr	96	67.337	ENSOCUG00000027291	-	97	66.834	Oryctolagus_cuniculus
ENSDARG00000037229	denr	96	78.894	ENSOCUG00000008150	-	93	77.387	Oryctolagus_cuniculus
ENSDARG00000037229	denr	100	80.769	ENSORLG00000001495	denr	100	79.808	Oryzias_latipes
ENSDARG00000037229	denr	100	80.769	ENSORLG00020015485	denr	100	79.808	Oryzias_latipes_hni
ENSDARG00000037229	denr	100	80.383	ENSORLG00015002890	denr	100	79.426	Oryzias_latipes_hsok
ENSDARG00000037229	denr	100	81.731	ENSOMEG00000021836	denr	100	81.731	Oryzias_melastigma
ENSDARG00000037229	denr	91	81.053	ENSOGAG00000012426	DENR	90	79.474	Otolemur_garnettii
ENSDARG00000037229	denr	90	76.190	ENSOARG00000008511	DENR	97	71.498	Ovis_aries
ENSDARG00000037229	denr	96	74.372	ENSPPAG00000031425	DENR	93	74.372	Pan_paniscus
ENSDARG00000037229	denr	90	82.353	ENSPPRG00000009664	-	88	80.749	Panthera_pardus
ENSDARG00000037229	denr	90	55.615	ENSPPRG00000020005	-	93	52.941	Panthera_pardus
ENSDARG00000037229	denr	90	81.818	ENSPTIG00000014761	-	88	80.214	Panthera_tigris_altaica
ENSDARG00000037229	denr	98	63.415	ENSPTIG00000021643	-	98	59.512	Panthera_tigris_altaica
ENSDARG00000037229	denr	96	78.894	ENSPTRG00000005584	DENR	93	77.387	Pan_troglodytes
ENSDARG00000037229	denr	84	81.714	ENSPANG00000035364	-	100	80.000	Papio_anubis
ENSDARG00000037229	denr	92	80.208	ENSPANG00000030074	-	91	78.646	Papio_anubis
ENSDARG00000037229	denr	100	80.000	ENSPKIG00000001107	denr	100	77.725	Paramormyrops_kingsleyae
ENSDARG00000037229	denr	98	77.295	ENSPSIG00000008249	DENR	94	75.362	Pelodiscus_sinensis
ENSDARG00000037229	denr	94	71.066	ENSPMGG00000017214	denr	72	63.235	Periophthalmus_magnuspinnatus
ENSDARG00000037229	denr	92	78.646	ENSPEMG00000006521	-	91	77.083	Peromyscus_maniculatus_bairdii
ENSDARG00000037229	denr	85	71.751	ENSPMAG00000008589	denr	88	71.751	Petromyzon_marinus
ENSDARG00000037229	denr	99	76.077	ENSPCIG00000022523	DENR	99	74.519	Phascolarctos_cinereus
ENSDARG00000037229	denr	100	84.286	ENSPFOG00000023419	denr	100	84.286	Poecilia_formosa
ENSDARG00000037229	denr	100	84.286	ENSPLAG00000014807	denr	100	84.286	Poecilia_latipinna
ENSDARG00000037229	denr	100	79.630	ENSPMEG00000020699	denr	100	79.630	Poecilia_mexicana
ENSDARG00000037229	denr	100	84.286	ENSPREG00000016795	denr	100	84.286	Poecilia_reticulata
ENSDARG00000037229	denr	97	73.786	ENSPCAG00000012039	DENR	97	72.330	Procavia_capensis
ENSDARG00000037229	denr	96	78.894	ENSPCOG00000015933	DENR	98	74.641	Propithecus_coquereli
ENSDARG00000037229	denr	97	75.243	ENSPVAG00000001291	DENR	97	73.786	Pteropus_vampyrus
ENSDARG00000037229	denr	100	82.857	ENSPNYG00000003833	denr	100	82.857	Pundamilia_nyererei
ENSDARG00000037229	denr	100	88.038	ENSPNAG00000021662	denr	100	88.038	Pygocentrus_nattereri
ENSDARG00000037229	denr	100	74.038	ENSRNOG00000001106	Denr	100	72.596	Rattus_norvegicus
ENSDARG00000037229	denr	92	50.521	ENSRBIG00000041357	DENR	89	54.688	Rhinopithecus_bieti
ENSDARG00000037229	denr	92	80.208	ENSRROG00000044446	DENR	91	78.646	Rhinopithecus_roxellana
ENSDARG00000037229	denr	80	31.765	YJR014W	TMA22	82	32.121	Saccharomyces_cerevisiae
ENSDARG00000037229	denr	92	51.309	ENSSBOG00000024171	-	92	46.269	Saimiri_boliviensis_boliviensis
ENSDARG00000037229	denr	75	72.903	ENSSBOG00000030149	-	79	70.968	Saimiri_boliviensis_boliviensis
ENSDARG00000037229	denr	98	71.359	ENSSHAG00000012064	DENR	98	69.903	Sarcophilus_harrisii
ENSDARG00000037229	denr	100	83.333	ENSSFOG00015018494	denr	100	83.333	Scleropages_formosus
ENSDARG00000037229	denr	91	82.011	ENSSMAG00000010563	denr	99	76.555	Scophthalmus_maximus
ENSDARG00000037229	denr	100	81.221	ENSSDUG00000023551	denr	100	81.221	Seriola_dumerili
ENSDARG00000037229	denr	100	81.690	ENSSLDG00000011430	denr	100	81.690	Seriola_lalandi_dorsalis
ENSDARG00000037229	denr	81	80.952	ENSSARG00000004446	DENR	100	79.167	Sorex_araneus
ENSDARG00000037229	denr	97	77.073	ENSSPUG00000012205	DENR	97	75.610	Sphenodon_punctatus
ENSDARG00000037229	denr	100	82.629	ENSSPAG00000019529	denr	100	82.629	Stegastes_partitus
ENSDARG00000037229	denr	97	77.073	ENSSSCG00000009788	-	97	75.610	Sus_scrofa
ENSDARG00000037229	denr	99	74.038	ENSTGUG00000005674	DENR	99	73.077	Taeniopygia_guttata
ENSDARG00000037229	denr	100	78.095	ENSTRUG00000020621	denr	100	78.095	Takifugu_rubripes
ENSDARG00000037229	denr	100	81.429	ENSTNIG00000013510	denr	99	81.429	Tetraodon_nigroviridis
ENSDARG00000037229	denr	92	65.152	ENSTTRG00000015856	DENR	93	63.636	Tursiops_truncatus
ENSDARG00000037229	denr	97	77.073	ENSUAMG00000003667	-	97	76.098	Ursus_americanus
ENSDARG00000037229	denr	84	51.705	ENSUAMG00000011200	-	85	50.000	Ursus_americanus
ENSDARG00000037229	denr	84	51.705	ENSUMAG00000023866	-	85	50.000	Ursus_maritimus
ENSDARG00000037229	denr	97	77.073	ENSUMAG00000005166	-	97	76.098	Ursus_maritimus
ENSDARG00000037229	denr	67	81.295	ENSVPAG00000011472	DENR	52	96.040	Vicugna_pacos
ENSDARG00000037229	denr	97	77.073	ENSVVUG00000028097	DENR	70	75.610	Vulpes_vulpes
ENSDARG00000037229	denr	98	77.184	ENSXETG00000005791	denr	88	80.214	Xenopus_tropicalis
ENSDARG00000037229	denr	100	79.048	ENSXCOG00000017611	denr	100	79.048	Xiphophorus_couchianus
ENSDARG00000037229	denr	100	84.286	ENSXMAG00000019247	denr	100	84.286	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001731	formation of translation preinitiation complex	21873635.	IBA	Process
GO:0002188	translation reinitiation	21873635.	IBA	Process
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	IEA	Function
GO:0006412	translation	-	IEA	Process
GO:0006413	translational initiation	-	IEA	Process