EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037309 (Gene tree)
Gene ID: 541317
Gene Symbol: gatb
Alias: pet112|pet112l|si:ch211-150a22.1|zgc:103736
Full Name: glutamyl-tRNA(Gln) amidotransferase%2C subunit B
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 38336 bases
Position: chr1:24520503-24558838
Accession: ZDB-GENE-040724-131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000093298	GatB_Yqey	PF02637.18	6.5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000131938	-	539	-	-	- (aa)	-	-
ENSDART00000102522	-	3697	-	ENSDARP00000093298	553 (aa)	-	Q7T010

Gene Model

Click here to download ENSDARG00000037309's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00970	Aminoacyl-tRNA biosynthesis	KEGG
dre01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037309	gatb	90	66.061	ENSG00000059691	GATB	78	79.061	Homo_sapiens
ENSDARG00000037309	gatb	99	69.873	ENSAPOG00000022676	gatb	99	69.873	Acanthochromis_polyacanthus
ENSDARG00000037309	gatb	90	64.056	ENSAMEG00000018434	GATB	89	64.056	Ailuropoda_melanoleuca
ENSDARG00000037309	gatb	78	73.272	ENSACIG00000015827	gatb	99	73.272	Amphilophus_citrinellus
ENSDARG00000037309	gatb	89	75.456	ENSAOCG00000009635	gatb	94	75.456	Amphiprion_ocellaris
ENSDARG00000037309	gatb	89	70.385	ENSAPEG00000023666	gatb	93	70.385	Amphiprion_percula
ENSDARG00000037309	gatb	99	70.054	ENSATEG00000011821	gatb	99	70.054	Anabas_testudineus
ENSDARG00000037309	gatb	89	69.371	ENSAPLG00000003933	GATB	99	69.371	Anas_platyrhynchos
ENSDARG00000037309	gatb	89	68.357	ENSACAG00000002772	GATB	90	68.357	Anolis_carolinensis
ENSDARG00000037309	gatb	90	65.455	ENSANAG00000020953	GATB	89	65.455	Aotus_nancymaae
ENSDARG00000037309	gatb	80	74.049	ENSACLG00000026091	gatb	90	74.049	Astatotilapia_calliptera
ENSDARG00000037309	gatb	90	72.490	ENSAMXG00000021662	gatb	89	72.490	Astyanax_mexicanus
ENSDARG00000037309	gatb	90	65.323	ENSBTAG00000013914	GATB	89	65.323	Bos_taurus
ENSDARG00000037309	gatb	90	65.253	ENSCJAG00000002147	GATB	89	65.253	Callithrix_jacchus
ENSDARG00000037309	gatb	89	65.720	ENSCAFG00000008088	GATB	88	65.720	Canis_familiaris
ENSDARG00000037309	gatb	89	65.720	ENSCAFG00020026686	GATB	84	71.883	Canis_lupus_dingo
ENSDARG00000037309	gatb	90	65.859	ENSCHIG00000020111	GATB	89	65.859	Capra_hircus
ENSDARG00000037309	gatb	90	67.475	ENSTSYG00000009976	GATB	89	67.475	Carlito_syrichta
ENSDARG00000037309	gatb	86	59.368	ENSCAPG00000010977	GATB	89	59.368	Cavia_aperea
ENSDARG00000037309	gatb	89	65.385	ENSCPOG00000005023	GATB	89	65.385	Cavia_porcellus
ENSDARG00000037309	gatb	74	71.394	ENSCCAG00000021445	GATB	82	71.394	Cebus_capucinus
ENSDARG00000037309	gatb	90	65.657	ENSCATG00000034281	GATB	89	65.657	Cercocebus_atys
ENSDARG00000037309	gatb	89	66.397	ENSCLAG00000005772	GATB	87	72.439	Chinchilla_lanigera
ENSDARG00000037309	gatb	90	66.061	ENSCSAG00000003318	GATB	89	66.061	Chlorocebus_sabaeus
ENSDARG00000037309	gatb	90	65.253	ENSCHOG00000008476	GATB	89	65.253	Choloepus_hoffmanni
ENSDARG00000037309	gatb	89	69.371	ENSCPBG00000025824	GATB	89	69.371	Chrysemys_picta_bellii
ENSDARG00000037309	gatb	90	66.061	ENSCANG00000029227	GATB	89	66.061	Colobus_angolensis_palliatus
ENSDARG00000037309	gatb	93	65.251	ENSCGRG00001024051	GATB	92	69.954	Cricetulus_griseus_chok1gshd
ENSDARG00000037309	gatb	93	65.251	ENSCGRG00000012974	GATB	92	69.954	Cricetulus_griseus_crigri
ENSDARG00000037309	gatb	99	69.439	ENSCSEG00000004009	gatb	99	71.659	Cynoglossus_semilaevis
ENSDARG00000037309	gatb	89	74.239	ENSCVAG00000017180	gatb	98	74.239	Cyprinodon_variegatus
ENSDARG00000037309	gatb	90	66.197	ENSDNOG00000012683	GATB	89	66.197	Dasypus_novemcinctus
ENSDARG00000037309	gatb	89	64.372	ENSDORG00000010241	Gatb	89	64.372	Dipodomys_ordii
ENSDARG00000037309	gatb	89	46.761	FBgn0039153	GatB	94	46.761	Drosophila_melanogaster
ENSDARG00000037309	gatb	89	46.545	ENSETEG00000002356	GATB	88	46.545	Echinops_telfairi
ENSDARG00000037309	gatb	90	67.879	ENSEASG00005015868	GATB	89	67.879	Equus_asinus_asinus
ENSDARG00000037309	gatb	90	65.859	ENSECAG00000003539	GATB	88	65.859	Equus_caballus
ENSDARG00000037309	gatb	75	65.758	ENSEEUG00000002311	GATB	74	65.758	Erinaceus_europaeus
ENSDARG00000037309	gatb	99	67.148	ENSELUG00000013584	gatb	96	72.211	Esox_lucius
ENSDARG00000037309	gatb	90	65.657	ENSFCAG00000003207	GATB	89	65.657	Felis_catus
ENSDARG00000037309	gatb	81	66.890	ENSFALG00000002209	GATB	99	66.890	Ficedula_albicollis
ENSDARG00000037309	gatb	90	65.657	ENSFDAG00000006426	GATB	87	70.976	Fukomys_damarensis
ENSDARG00000037309	gatb	94	70.633	ENSFHEG00000008643	GATB	95	70.633	Fundulus_heteroclitus
ENSDARG00000037309	gatb	88	70.552	ENSGMOG00000001575	gatb	99	70.552	Gadus_morhua
ENSDARG00000037309	gatb	90	69.014	ENSGALG00000010097	GATB	91	69.014	Gallus_gallus
ENSDARG00000037309	gatb	89	72.414	ENSGAFG00000014422	gatb	90	72.414	Gambusia_affinis
ENSDARG00000037309	gatb	88	73.006	ENSGACG00000017143	gatb	99	73.006	Gasterosteus_aculeatus
ENSDARG00000037309	gatb	90	68.675	ENSGAGG00000007826	GATB	90	68.675	Gopherus_agassizii
ENSDARG00000037309	gatb	90	65.859	ENSGGOG00000011099	GATB	89	65.859	Gorilla_gorilla
ENSDARG00000037309	gatb	93	72.904	ENSHBUG00000009656	gatb	93	72.904	Haplochromis_burtoni
ENSDARG00000037309	gatb	89	65.789	ENSHGLG00000001316	GATB	87	71.602	Heterocephalus_glaber_female
ENSDARG00000037309	gatb	89	65.789	ENSHGLG00100004289	GATB	87	71.707	Heterocephalus_glaber_male
ENSDARG00000037309	gatb	97	67.844	ENSHCOG00000006270	gatb	97	67.844	Hippocampus_comes
ENSDARG00000037309	gatb	99	72.826	ENSIPUG00000013560	gatb	99	72.826	Ictalurus_punctatus
ENSDARG00000037309	gatb	98	62.292	ENSSTOG00000005689	GATB	96	62.292	Ictidomys_tridecemlineatus
ENSDARG00000037309	gatb	89	66.395	ENSJJAG00000016979	Gatb	86	72.414	Jaculus_jaculus
ENSDARG00000037309	gatb	94	71.977	ENSKMAG00000004727	gatb	95	71.977	Kryptolebias_marmoratus
ENSDARG00000037309	gatb	93	71.954	ENSLBEG00000019511	gatb	94	71.954	Labrus_bergylta
ENSDARG00000037309	gatb	90	62.626	ENSLACG00000004352	GATB	97	63.030	Latimeria_chalumnae
ENSDARG00000037309	gatb	99	61.802	ENSLOCG00000008564	gatb	99	61.802	Lepisosteus_oculatus
ENSDARG00000037309	gatb	90	67.879	ENSLAFG00000022607	GATB	89	67.879	Loxodonta_africana
ENSDARG00000037309	gatb	97	61.765	ENSMMUG00000011048	GATB	97	61.765	Macaca_mulatta
ENSDARG00000037309	gatb	97	61.765	ENSMNEG00000040147	GATB	97	61.765	Macaca_nemestrina
ENSDARG00000037309	gatb	90	66.263	ENSMLEG00000042135	GATB	89	66.263	Mandrillus_leucophaeus
ENSDARG00000037309	gatb	99	68.603	ENSMAMG00000013256	gatb	99	68.603	Mastacembelus_armatus
ENSDARG00000037309	gatb	94	72.553	ENSMZEG00005008495	gatb	95	72.553	Maylandia_zebra
ENSDARG00000037309	gatb	92	68.775	ENSMGAG00000004276	GATB	99	69.048	Meleagris_gallopavo
ENSDARG00000037309	gatb	93	65.643	ENSMAUG00000019099	Gatb	92	70.413	Mesocricetus_auratus
ENSDARG00000037309	gatb	90	66.263	ENSMICG00000004311	GATB	88	66.263	Microcebus_murinus
ENSDARG00000037309	gatb	90	66.263	ENSMOCG00000017566	Gatb	87	71.951	Microtus_ochrogaster
ENSDARG00000037309	gatb	89	61.492	ENSMMOG00000005376	gatb	86	61.492	Mola_mola
ENSDARG00000037309	gatb	90	66.869	ENSMODG00000001031	GATB	90	66.869	Monodelphis_domestica
ENSDARG00000037309	gatb	98	68.566	ENSMALG00000003418	gatb	99	68.738	Monopterus_albus
ENSDARG00000037309	gatb	99	61.314	MGP_CAROLIEiJ_G0025120	Gatb	98	65.517	Mus_caroli
ENSDARG00000037309	gatb	90	66.465	ENSMUSG00000028085	Gatb	87	72.195	Mus_musculus
ENSDARG00000037309	gatb	90	66.263	MGP_PahariEiJ_G0026563	Gatb	87	71.951	Mus_pahari
ENSDARG00000037309	gatb	90	66.465	MGP_SPRETEiJ_G0026062	Gatb	89	66.465	Mus_spretus
ENSDARG00000037309	gatb	89	66.057	ENSMPUG00000007394	GATB	88	66.057	Mustela_putorius_furo
ENSDARG00000037309	gatb	90	67.677	ENSMLUG00000008194	GATB	89	67.677	Myotis_lucifugus
ENSDARG00000037309	gatb	90	66.869	ENSNGAG00000002152	Gatb	87	72.683	Nannospalax_galili
ENSDARG00000037309	gatb	78	73.394	ENSNBRG00000005947	gatb	99	73.394	Neolamprologus_brichardi
ENSDARG00000037309	gatb	90	65.859	ENSNLEG00000005836	GATB	89	65.859	Nomascus_leucogenys
ENSDARG00000037309	gatb	90	66.667	ENSMEUG00000001479	GATB	99	66.667	Notamacropus_eugenii
ENSDARG00000037309	gatb	89	66.734	ENSOPRG00000011496	GATB	88	66.734	Ochotona_princeps
ENSDARG00000037309	gatb	89	65.992	ENSODEG00000005429	GATB	87	71.951	Octodon_degus
ENSDARG00000037309	gatb	99	69.691	ENSONIG00000010059	gatb	99	69.691	Oreochromis_niloticus
ENSDARG00000037309	gatb	79	65.446	ENSOANG00000005282	GATB	100	65.446	Ornithorhynchus_anatinus
ENSDARG00000037309	gatb	90	66.263	ENSOCUG00000016875	GATB	89	66.263	Oryctolagus_cuniculus
ENSDARG00000037309	gatb	89	70.732	ENSORLG00000007740	gatb	99	70.732	Oryzias_latipes
ENSDARG00000037309	gatb	99	66.365	ENSORLG00020016385	gatb	99	66.365	Oryzias_latipes_hni
ENSDARG00000037309	gatb	94	69.808	ENSOMEG00000003089	gatb	95	69.808	Oryzias_melastigma
ENSDARG00000037309	gatb	90	65.121	ENSOGAG00000014181	GATB	89	65.121	Otolemur_garnettii
ENSDARG00000037309	gatb	90	65.261	ENSOARG00000004355	GATB	89	65.261	Ovis_aries
ENSDARG00000037309	gatb	90	66.061	ENSPPAG00000041690	GATB	89	66.061	Pan_paniscus
ENSDARG00000037309	gatb	90	65.657	ENSPPRG00000004993	GATB	89	65.657	Panthera_pardus
ENSDARG00000037309	gatb	90	65.657	ENSPTIG00000021433	GATB	89	65.657	Panthera_tigris_altaica
ENSDARG00000037309	gatb	90	63.030	ENSPTRG00000016513	GATB	88	63.030	Pan_troglodytes
ENSDARG00000037309	gatb	90	63.030	ENSPANG00000024036	GATB	89	63.030	Papio_anubis
ENSDARG00000037309	gatb	99	68.592	ENSPKIG00000017076	gatb	95	73.225	Paramormyrops_kingsleyae
ENSDARG00000037309	gatb	89	68.560	ENSPSIG00000017832	GATB	90	68.560	Pelodiscus_sinensis
ENSDARG00000037309	gatb	89	62.677	ENSPMGG00000016497	gatb	88	62.677	Periophthalmus_magnuspinnatus
ENSDARG00000037309	gatb	93	64.683	ENSPEMG00000011096	Gatb	92	69.495	Peromyscus_maniculatus_bairdii
ENSDARG00000037309	gatb	90	67.677	ENSPCIG00000015213	GATB	90	67.677	Phascolarctos_cinereus
ENSDARG00000037309	gatb	99	67.690	ENSPFOG00000009933	gatb	99	67.690	Poecilia_formosa
ENSDARG00000037309	gatb	99	68.058	ENSPLAG00000015569	gatb	99	68.058	Poecilia_latipinna
ENSDARG00000037309	gatb	99	67.877	ENSPMEG00000006100	gatb	99	67.877	Poecilia_mexicana
ENSDARG00000037309	gatb	90	72.984	ENSPREG00000000128	gatb	91	72.984	Poecilia_reticulata
ENSDARG00000037309	gatb	89	67.006	ENSPPYG00000015121	GATB	88	67.006	Pongo_abelii
ENSDARG00000037309	gatb	90	53.535	ENSPCAG00000005950	GATB	89	53.535	Procavia_capensis
ENSDARG00000037309	gatb	90	66.263	ENSPCOG00000021777	GATB	90	66.263	Propithecus_coquereli
ENSDARG00000037309	gatb	93	64.054	ENSPVAG00000006891	GATB	94	64.054	Pteropus_vampyrus
ENSDARG00000037309	gatb	94	72.553	ENSPNYG00000013884	gatb	95	72.553	Pundamilia_nyererei
ENSDARG00000037309	gatb	99	72.101	ENSPNAG00000020150	gatb	99	72.101	Pygocentrus_nattereri
ENSDARG00000037309	gatb	90	65.657	ENSRNOG00000037655	Gatb	89	65.657	Rattus_norvegicus
ENSDARG00000037309	gatb	90	66.061	ENSRBIG00000006453	GATB	89	66.061	Rhinopithecus_bieti
ENSDARG00000037309	gatb	90	66.061	ENSRROG00000041575	GATB	89	66.061	Rhinopithecus_roxellana
ENSDARG00000037309	gatb	90	65.253	ENSSBOG00000022495	GATB	89	65.253	Saimiri_boliviensis_boliviensis
ENSDARG00000037309	gatb	90	66.869	ENSSHAG00000011763	GATB	90	66.869	Sarcophilus_harrisii
ENSDARG00000037309	gatb	99	68.909	ENSSFOG00015015565	gatb	98	68.909	Scleropages_formosus
ENSDARG00000037309	gatb	99	69.636	ENSSMAG00000003609	gatb	76	69.636	Scophthalmus_maximus
ENSDARG00000037309	gatb	99	70.054	ENSSDUG00000019847	gatb	99	70.054	Seriola_dumerili
ENSDARG00000037309	gatb	89	73.834	ENSSLDG00000010253	gatb	95	73.834	Seriola_lalandi_dorsalis
ENSDARG00000037309	gatb	65	65.455	ENSSARG00000003212	GATB	65	65.455	Sorex_araneus
ENSDARG00000037309	gatb	89	68.421	ENSSPUG00000014453	GATB	96	68.421	Sphenodon_punctatus
ENSDARG00000037309	gatb	89	75.456	ENSSPAG00000014465	gatb	98	75.456	Stegastes_partitus
ENSDARG00000037309	gatb	90	65.859	ENSSSCG00000009015	GATB	99	63.761	Sus_scrofa
ENSDARG00000037309	gatb	89	69.371	ENSTGUG00000004986	GATB	99	69.371	Taeniopygia_guttata
ENSDARG00000037309	gatb	95	63.586	ENSTRUG00000015238	gatb	98	63.586	Takifugu_rubripes
ENSDARG00000037309	gatb	74	70.732	ENSTNIG00000003378	gatb	99	70.732	Tetraodon_nigroviridis
ENSDARG00000037309	gatb	77	50.704	ENSTBEG00000009804	GATB	87	50.704	Tupaia_belangeri
ENSDARG00000037309	gatb	90	64.848	ENSTTRG00000010679	GATB	89	64.848	Tursiops_truncatus
ENSDARG00000037309	gatb	90	65.051	ENSUAMG00000021441	GATB	89	65.051	Ursus_americanus
ENSDARG00000037309	gatb	90	65.051	ENSUMAG00000016157	GATB	89	65.051	Ursus_maritimus
ENSDARG00000037309	gatb	70	77.737	ENSVPAG00000010844	GATB	69	77.737	Vicugna_pacos
ENSDARG00000037309	gatb	89	65.720	ENSVVUG00000025083	GATB	88	65.720	Vulpes_vulpes
ENSDARG00000037309	gatb	88	69.734	ENSXETG00000034167	GATB	100	69.109	Xenopus_tropicalis
ENSDARG00000037309	gatb	89	72.211	ENSXMAG00000008071	gatb	89	80.921	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0016874	ligase activity	-	IEA	Function
GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	-	IEA	Function
GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex	21873635.	IBA	Component
GO:0032543	mitochondrial translation	21873635.	IBA	Process
GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	21873635.	IBA	Function
GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation	21873635.	IBA	Process