EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037503 (Gene tree)
Gene ID: 368417
Gene Symbol: thoc2
Alias: Tho2|fb73e08|fd21d11|si:bz1o18.2|wu:fb73e08|wu:fd21d11
Full Name: THO complex 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 94757 bases
Position: chr14:12391871-12486627
Accession: ZDB-GENE-030616-54
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000054610	Tho2	PF11262.8	4.5e-102	1	1
ENSDARP00000099604	Tho2	PF11262.8	4.6e-102	1	1
ENSDARP00000097404	Tho2	PF11262.8	4.7e-102	1	1
ENSDARP00000054610	Thoc2	PF11732.8	6.8e-36	1	1
ENSDARP00000099604	Thoc2	PF11732.8	6.8e-36	1	1
ENSDARP00000097404	Thoc2	PF11732.8	9.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000106626	-	5492	XM_005157134	ENSDARP00000097404	1560 (aa)	XP_005157191	F1QXF4
ENSDART00000126655	-	1063	-	ENSDARP00000141871	154 (aa)	-	A0A0R4IXB9
ENSDART00000146178	-	574	-	-	- (aa)	-	-
ENSDART00000143316	-	2584	-	-	- (aa)	-	-
ENSDART00000141138	-	352	-	-	- (aa)	-	-
ENSDART00000054611	-	5471	-	ENSDARP00000054610	1504 (aa)	-	F1RCI0
ENSDART00000115408	-	5457	-	ENSDARP00000099604	1535 (aa)	-	F1R5B5

Gene Model

Click here to download ENSDARG00000037503's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037503's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037503	thoc2	99	74.811	ENSG00000125676	THOC2	99	76.216	Homo_sapiens
ENSDARG00000037503	thoc2	100	79.326	ENSAPOG00000003459	thoc2	100	79.453	Acanthochromis_polyacanthus
ENSDARG00000037503	thoc2	99	74.343	ENSAMEG00000014841	THOC2	99	74.452	Ailuropoda_melanoleuca
ENSDARG00000037503	thoc2	92	78.536	ENSACIG00000015022	thoc2	99	78.551	Amphilophus_citrinellus
ENSDARG00000037503	thoc2	98	77.296	ENSAOCG00000013305	thoc2	98	79.574	Amphiprion_ocellaris
ENSDARG00000037503	thoc2	98	77.167	ENSAPEG00000004792	thoc2	98	80.199	Amphiprion_percula
ENSDARG00000037503	thoc2	99	79.361	ENSATEG00000013110	thoc2	99	79.425	Anabas_testudineus
ENSDARG00000037503	thoc2	95	77.581	ENSAPLG00000010614	THOC2	100	76.923	Anas_platyrhynchos
ENSDARG00000037503	thoc2	100	74.021	ENSACAG00000011585	THOC2	100	75.016	Anolis_carolinensis
ENSDARG00000037503	thoc2	99	73.446	ENSANAG00000022505	-	99	75.509	Aotus_nancymaae
ENSDARG00000037503	thoc2	98	72.054	ENSANAG00000034037	-	99	74.053	Aotus_nancymaae
ENSDARG00000037503	thoc2	96	77.556	ENSACLG00000012036	thoc2	100	76.825	Astatotilapia_calliptera
ENSDARG00000037503	thoc2	99	85.866	ENSAMXG00000014184	thoc2	99	86.065	Astyanax_mexicanus
ENSDARG00000037503	thoc2	99	74.671	ENSBTAG00000008388	THOC2	99	74.843	Bos_taurus
ENSDARG00000037503	thoc2	98	73.129	ENSBTAG00000047341	-	98	73.175	Bos_taurus
ENSDARG00000037503	thoc2	91	33.745	WBGene00015813	thoc-2	91	33.502	Caenorhabditis_elegans
ENSDARG00000037503	thoc2	99	74.764	ENSCJAG00000016157	THOC2	97	77.273	Callithrix_jacchus
ENSDARG00000037503	thoc2	99	74.796	ENSCAFG00000018574	THOC2	100	76.887	Canis_familiaris
ENSDARG00000037503	thoc2	99	74.224	ENSCAFG00020002284	THOC2	99	75.553	Canis_lupus_dingo
ENSDARG00000037503	thoc2	98	73.782	ENSCHIG00000025851	-	99	73.445	Capra_hircus
ENSDARG00000037503	thoc2	99	73.363	ENSCHIG00000017733	-	99	74.398	Capra_hircus
ENSDARG00000037503	thoc2	99	72.963	ENSTSYG00000012292	THOC2	99	73.135	Carlito_syrichta
ENSDARG00000037503	thoc2	99	72.514	ENSCPOG00000038670	THOC2	99	72.348	Cavia_porcellus
ENSDARG00000037503	thoc2	99	74.748	ENSCCAG00000021906	THOC2	99	74.780	Cebus_capucinus
ENSDARG00000037503	thoc2	99	74.811	ENSCATG00000003183	THOC2	99	74.843	Cercocebus_atys
ENSDARG00000037503	thoc2	99	74.608	ENSCLAG00000002641	THOC2	99	75.823	Chinchilla_lanigera
ENSDARG00000037503	thoc2	99	74.811	ENSCSAG00000018332	THOC2	99	74.843	Chlorocebus_sabaeus
ENSDARG00000037503	thoc2	98	76.005	ENSCPBG00000012863	THOC2	99	81.113	Chrysemys_picta_bellii
ENSDARG00000037503	thoc2	78	56.481	ENSCING00000007364	-	99	56.602	Ciona_intestinalis
ENSDARG00000037503	thoc2	65	58.583	ENSCSAVG00000007923	-	100	74.468	Ciona_savignyi
ENSDARG00000037503	thoc2	99	74.811	ENSCANG00000035077	THOC2	99	74.843	Colobus_angolensis_palliatus
ENSDARG00000037503	thoc2	99	72.030	ENSCGRG00001009811	BC005561	99	71.842	Cricetulus_griseus_chok1gshd
ENSDARG00000037503	thoc2	99	73.908	ENSCGRG00001015509	Thoc2	99	73.891	Cricetulus_griseus_chok1gshd
ENSDARG00000037503	thoc2	98	72.821	ENSCGRG00000001226	Thoc2	99	72.804	Cricetulus_griseus_crigri
ENSDARG00000037503	thoc2	99	72.093	ENSCGRG00000000980	BC005561	99	71.904	Cricetulus_griseus_crigri
ENSDARG00000037503	thoc2	89	78.932	ENSCSEG00000019946	thoc2	99	79.063	Cynoglossus_semilaevis
ENSDARG00000037503	thoc2	100	75.032	ENSCVAG00000021509	thoc2	100	74.968	Cyprinodon_variegatus
ENSDARG00000037503	thoc2	99	72.489	ENSDNOG00000012487	THOC2	99	72.909	Dasypus_novemcinctus
ENSDARG00000037503	thoc2	99	41.976	FBgn0031390	tho2	73	47.545	Drosophila_melanogaster
ENSDARG00000037503	thoc2	90	68.648	ENSETEG00000016183	THOC2	95	82.353	Echinops_telfairi
ENSDARG00000037503	thoc2	95	76.432	ENSEASG00005017399	THOC2	100	76.416	Equus_asinus_asinus
ENSDARG00000037503	thoc2	99	74.859	ENSECAG00000010431	THOC2	99	75.809	Equus_caballus
ENSDARG00000037503	thoc2	72	89.320	ENSEEUG00000015598	THOC2	78	89.320	Erinaceus_europaeus
ENSDARG00000037503	thoc2	92	80.881	ENSELUG00000007778	thoc2	98	80.597	Esox_lucius
ENSDARG00000037503	thoc2	99	74.796	ENSFCAG00000008301	THOC2	99	74.906	Felis_catus
ENSDARG00000037503	thoc2	99	74.876	ENSFALG00000001519	THOC2	99	74.411	Ficedula_albicollis
ENSDARG00000037503	thoc2	98	75.064	ENSFDAG00000017237	THOC2	99	75.656	Fukomys_damarensis
ENSDARG00000037503	thoc2	100	74.905	ENSFHEG00000001695	thoc2	100	75.080	Fundulus_heteroclitus
ENSDARG00000037503	thoc2	99	74.406	ENSGMOG00000000069	thoc2	100	75.729	Gadus_morhua
ENSDARG00000037503	thoc2	94	76.828	ENSGALG00000008507	THOC2	99	77.156	Gallus_gallus
ENSDARG00000037503	thoc2	97	76.697	ENSGAFG00000005902	thoc2	100	76.165	Gambusia_affinis
ENSDARG00000037503	thoc2	99	77.712	ENSGACG00000020367	thoc2	100	77.631	Gasterosteus_aculeatus
ENSDARG00000037503	thoc2	98	76.255	ENSGAGG00000024263	THOC2	99	75.853	Gopherus_agassizii
ENSDARG00000037503	thoc2	99	74.811	ENSGGOG00000000486	THOC2	99	74.843	Gorilla_gorilla
ENSDARG00000037503	thoc2	94	78.966	ENSHBUG00000003516	thoc2	99	80.027	Haplochromis_burtoni
ENSDARG00000037503	thoc2	99	74.169	ENSHGLG00000004222	THOC2	99	73.902	Heterocephalus_glaber_female
ENSDARG00000037503	thoc2	94	79.749	ENSHGLG00100011595	THOC2	93	79.447	Heterocephalus_glaber_male
ENSDARG00000037503	thoc2	97	76.756	ENSHCOG00000006276	thoc2	99	76.625	Hippocampus_comes
ENSDARG00000037503	thoc2	100	85.504	ENSIPUG00000015876	thoc2	99	86.671	Ictalurus_punctatus
ENSDARG00000037503	thoc2	99	74.373	ENSSTOG00000009134	THOC2	99	74.483	Ictidomys_tridecemlineatus
ENSDARG00000037503	thoc2	99	70.773	ENSJJAG00000008784	BC005561	99	71.214	Jaculus_jaculus
ENSDARG00000037503	thoc2	99	73.997	ENSJJAG00000017282	Thoc2	99	74.420	Jaculus_jaculus
ENSDARG00000037503	thoc2	98	75.248	ENSKMAG00000012263	thoc2	99	80.684	Kryptolebias_marmoratus
ENSDARG00000037503	thoc2	100	78.200	ENSLBEG00000003049	thoc2	100	78.327	Labrus_bergylta
ENSDARG00000037503	thoc2	97	76.872	ENSLACG00000016494	THOC2	99	76.520	Latimeria_chalumnae
ENSDARG00000037503	thoc2	100	80.982	ENSLOCG00000014546	thoc2	99	81.830	Lepisosteus_oculatus
ENSDARG00000037503	thoc2	99	74.734	ENSLAFG00000003146	THOC2	99	74.843	Loxodonta_africana
ENSDARG00000037503	thoc2	99	74.811	ENSMFAG00000042215	THOC2	99	74.843	Macaca_fascicularis
ENSDARG00000037503	thoc2	99	74.811	ENSMMUG00000003745	THOC2	99	75.764	Macaca_mulatta
ENSDARG00000037503	thoc2	99	74.811	ENSMNEG00000033627	THOC2	99	74.843	Macaca_nemestrina
ENSDARG00000037503	thoc2	99	74.811	ENSMLEG00000034817	THOC2	99	74.843	Mandrillus_leucophaeus
ENSDARG00000037503	thoc2	98	77.320	ENSMAMG00000012993	thoc2	100	77.191	Mastacembelus_armatus
ENSDARG00000037503	thoc2	100	79.008	ENSMZEG00005015842	thoc2	100	79.389	Maylandia_zebra
ENSDARG00000037503	thoc2	98	76.829	ENSMGAG00000007345	THOC2	100	75.444	Meleagris_gallopavo
ENSDARG00000037503	thoc2	99	74.575	ENSMAUG00000002356	Thoc2	99	74.483	Mesocricetus_auratus
ENSDARG00000037503	thoc2	99	74.232	ENSMICG00000011840	THOC2	99	74.843	Microcebus_murinus
ENSDARG00000037503	thoc2	99	74.436	ENSMOCG00000009946	Thoc2	99	74.545	Microtus_ochrogaster
ENSDARG00000037503	thoc2	99	71.160	ENSMOCG00000019406	BC005561	99	71.679	Microtus_ochrogaster
ENSDARG00000037503	thoc2	98	75.732	ENSMMOG00000016313	thoc2	100	75.541	Mola_mola
ENSDARG00000037503	thoc2	99	73.889	ENSMODG00000014984	THOC2	99	73.559	Monodelphis_domestica
ENSDARG00000037503	thoc2	98	75.938	ENSMALG00000019718	thoc2	100	75.809	Monopterus_albus
ENSDARG00000037503	thoc2	99	71.150	MGP_CAROLIEiJ_G0027482	BC005561	99	71.276	Mus_caroli
ENSDARG00000037503	thoc2	99	74.135	MGP_CAROLIEiJ_G0033023	Thoc2	99	74.545	Mus_caroli
ENSDARG00000037503	thoc2	99	74.009	ENSMUSG00000037475	Thoc2	99	74.420	Mus_musculus
ENSDARG00000037503	thoc2	99	71.402	ENSMUSG00000079065	BC005561	99	71.527	Mus_musculus
ENSDARG00000037503	thoc2	99	71.366	MGP_PahariEiJ_G0017260	BC005561	99	71.679	Mus_pahari
ENSDARG00000037503	thoc2	99	74.072	MGP_PahariEiJ_G0031569	Thoc2	99	74.483	Mus_pahari
ENSDARG00000037503	thoc2	99	71.402	MGP_SPRETEiJ_G0028479	BC005561	99	71.527	Mus_spretus
ENSDARG00000037503	thoc2	99	74.009	MGP_SPRETEiJ_G0034181	Thoc2	99	74.420	Mus_spretus
ENSDARG00000037503	thoc2	99	74.423	ENSMPUG00000001357	THOC2	99	74.532	Mustela_putorius_furo
ENSDARG00000037503	thoc2	98	74.379	ENSMLUG00000013656	-	99	74.490	Myotis_lucifugus
ENSDARG00000037503	thoc2	97	66.667	ENSMLUG00000028256	-	99	66.621	Myotis_lucifugus
ENSDARG00000037503	thoc2	97	71.166	ENSMLUG00000026072	-	99	71.351	Myotis_lucifugus
ENSDARG00000037503	thoc2	90	70.403	ENSMLUG00000027559	-	99	69.826	Myotis_lucifugus
ENSDARG00000037503	thoc2	99	71.967	ENSNGAG00000010936	BC005561	99	71.635	Nannospalax_galili
ENSDARG00000037503	thoc2	99	73.618	ENSNGAG00000016184	Thoc2	99	73.476	Nannospalax_galili
ENSDARG00000037503	thoc2	91	79.044	ENSNBRG00000018089	thoc2	99	79.786	Neolamprologus_brichardi
ENSDARG00000037503	thoc2	99	71.166	ENSNLEG00000015055	THOC2	99	71.338	Nomascus_leucogenys
ENSDARG00000037503	thoc2	82	81.897	ENSMEUG00000003533	THOC2	81	81.897	Notamacropus_eugenii
ENSDARG00000037503	thoc2	99	74.559	ENSODEG00000002478	THOC2	99	74.592	Octodon_degus
ENSDARG00000037503	thoc2	100	78.780	ENSONIG00000004348	thoc2	99	79.161	Oreochromis_niloticus
ENSDARG00000037503	thoc2	97	75.818	ENSOANG00000004054	THOC2	99	76.444	Ornithorhynchus_anatinus
ENSDARG00000037503	thoc2	99	73.902	ENSOCUG00000005996	THOC2	99	74.718	Oryctolagus_cuniculus
ENSDARG00000037503	thoc2	100	76.957	ENSORLG00000008692	thoc2	100	76.801	Oryzias_latipes
ENSDARG00000037503	thoc2	100	74.634	ENSORLG00020002321	thoc2	99	77.502	Oryzias_latipes_hni
ENSDARG00000037503	thoc2	100	75.540	ENSORLG00015000665	thoc2	99	79.783	Oryzias_latipes_hsok
ENSDARG00000037503	thoc2	99	76.918	ENSOMEG00000004006	thoc2	99	76.889	Oryzias_melastigma
ENSDARG00000037503	thoc2	99	74.295	ENSOGAG00000000302	THOC2	99	74.718	Otolemur_garnettii
ENSDARG00000037503	thoc2	98	75.208	ENSOARG00000013665	-	99	75.384	Ovis_aries
ENSDARG00000037503	thoc2	77	92.188	ENSOARG00000003614	-	95	92.188	Ovis_aries
ENSDARG00000037503	thoc2	99	73.262	ENSPPAG00000040720	THOC2	99	77.046	Pan_paniscus
ENSDARG00000037503	thoc2	99	74.859	ENSPPRG00000023137	THOC2	99	74.969	Panthera_pardus
ENSDARG00000037503	thoc2	99	73.697	ENSPTIG00000006983	THOC2	99	73.204	Panthera_tigris_altaica
ENSDARG00000037503	thoc2	99	74.734	ENSPTRG00000022246	THOC2	99	74.843	Pan_troglodytes
ENSDARG00000037503	thoc2	98	73.013	ENSPANG00000004038	THOC2	99	73.188	Papio_anubis
ENSDARG00000037503	thoc2	99	79.150	ENSPKIG00000021719	thoc2	94	84.932	Paramormyrops_kingsleyae
ENSDARG00000037503	thoc2	99	75.419	ENSPSIG00000015352	THOC2	98	75.791	Pelodiscus_sinensis
ENSDARG00000037503	thoc2	97	74.897	ENSPMGG00000002688	thoc2	100	73.272	Periophthalmus_magnuspinnatus
ENSDARG00000037503	thoc2	99	72.156	ENSPEMG00000011125	BC005561	99	71.842	Peromyscus_maniculatus_bairdii
ENSDARG00000037503	thoc2	99	74.340	ENSPEMG00000007626	Thoc2	99	74.311	Peromyscus_maniculatus_bairdii
ENSDARG00000037503	thoc2	99	62.776	ENSPMAG00000007219	-	99	72.823	Petromyzon_marinus
ENSDARG00000037503	thoc2	65	81.560	ENSPCIG00000007574	THOC2	99	83.548	Phascolarctos_cinereus
ENSDARG00000037503	thoc2	99	76.972	ENSPFOG00000019556	thoc2	99	76.452	Poecilia_formosa
ENSDARG00000037503	thoc2	100	75.928	ENSPLAG00000005761	thoc2	100	75.160	Poecilia_latipinna
ENSDARG00000037503	thoc2	100	75.625	ENSPMEG00000002951	thoc2	100	75.112	Poecilia_mexicana
ENSDARG00000037503	thoc2	100	77.247	ENSPREG00000021746	thoc2	100	76.811	Poecilia_reticulata
ENSDARG00000037503	thoc2	99	74.811	ENSPPYG00000020695	THOC2	99	74.843	Pongo_abelii
ENSDARG00000037503	thoc2	99	62.926	ENSPCAG00000005402	THOC2	99	63.791	Procavia_capensis
ENSDARG00000037503	thoc2	99	71.826	ENSPCOG00000001806	THOC2	99	72.440	Propithecus_coquereli
ENSDARG00000037503	thoc2	99	73.981	ENSPVAG00000006132	THOC2	100	75.439	Pteropus_vampyrus
ENSDARG00000037503	thoc2	94	79.719	ENSPNYG00000019622	thoc2	100	76.928	Pundamilia_nyererei
ENSDARG00000037503	thoc2	100	83.237	ENSPNAG00000020593	thoc2	100	83.366	Pygocentrus_nattereri
ENSDARG00000037503	thoc2	99	73.872	ENSRNOG00000007315	Thoc2	99	74.295	Rattus_norvegicus
ENSDARG00000037503	thoc2	99	71.213	ENSRNOG00000042340	LOC679894	99	71.805	Rattus_norvegicus
ENSDARG00000037503	thoc2	82	74.980	ENSRBIG00000044129	THOC2	99	75.138	Rhinopithecus_bieti
ENSDARG00000037503	thoc2	99	74.811	ENSRROG00000041515	THOC2	99	74.843	Rhinopithecus_roxellana
ENSDARG00000037503	thoc2	99	74.827	ENSSBOG00000007245	THOC2	99	74.780	Saimiri_boliviensis_boliviensis
ENSDARG00000037503	thoc2	98	75.367	ENSSHAG00000015987	THOC2	99	75.223	Sarcophilus_harrisii
ENSDARG00000037503	thoc2	100	81.083	ENSSFOG00015010127	thoc2	98	84.830	Scleropages_formosus
ENSDARG00000037503	thoc2	100	82.079	ENSSFOG00015004767	THOC2	100	82.451	Scleropages_formosus
ENSDARG00000037503	thoc2	100	78.499	ENSSMAG00000016574	thoc2	100	78.690	Scophthalmus_maximus
ENSDARG00000037503	thoc2	100	79.517	ENSSDUG00000012815	thoc2	100	80.905	Seriola_dumerili
ENSDARG00000037503	thoc2	100	79.389	ENSSLDG00000015816	thoc2	100	79.580	Seriola_lalandi_dorsalis
ENSDARG00000037503	thoc2	89	78.638	ENSSARG00000005799	THOC2	100	71.073	Sorex_araneus
ENSDARG00000037503	thoc2	99	74.658	ENSSPUG00000012889	THOC2	99	74.596	Sphenodon_punctatus
ENSDARG00000037503	thoc2	84	83.177	ENSSPAG00000023593	thoc2	91	82.984	Stegastes_partitus
ENSDARG00000037503	thoc2	99	74.295	ENSSSCG00000012639	THOC2	99	75.882	Sus_scrofa
ENSDARG00000037503	thoc2	92	77.310	ENSTGUG00000003682	THOC2	99	77.242	Taeniopygia_guttata
ENSDARG00000037503	thoc2	99	76.136	ENSTRUG00000015122	thoc2	99	75.944	Takifugu_rubripes
ENSDARG00000037503	thoc2	99	75.414	ENSTNIG00000011794	thoc2	100	75.447	Tetraodon_nigroviridis
ENSDARG00000037503	thoc2	80	72.442	ENSTBEG00000004420	-	100	72.334	Tupaia_belangeri
ENSDARG00000037503	thoc2	55	85.124	ENSTBEG00000005854	-	55	85.124	Tupaia_belangeri
ENSDARG00000037503	thoc2	91	90.123	ENSTTRG00000002762	THOC2	96	76.871	Tursiops_truncatus
ENSDARG00000037503	thoc2	99	74.161	ENSUAMG00000008780	THOC2	99	77.107	Ursus_americanus
ENSDARG00000037503	thoc2	94	73.291	ENSUMAG00000024014	THOC2	99	78.830	Ursus_maritimus
ENSDARG00000037503	thoc2	98	75.208	ENSVPAG00000006247	THOC2	99	76.014	Vicugna_pacos
ENSDARG00000037503	thoc2	99	74.952	ENSVVUG00000028282	THOC2	99	77.584	Vulpes_vulpes
ENSDARG00000037503	thoc2	100	73.154	ENSXETG00000016195	thoc2	99	87.296	Xenopus_tropicalis
ENSDARG00000037503	thoc2	97	76.807	ENSXCOG00000006301	thoc2	100	76.016	Xiphophorus_couchianus
ENSDARG00000037503	thoc2	97	76.807	ENSXMAG00000011604	thoc2	99	78.602	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000347	THO complex	-	IEA	Component
GO:0000445	THO complex part of transcription export complex	21873635.	IBA	Component
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0006397	mRNA processing	-	IEA	Process
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0006406	mRNA export from nucleus	-	IEA	Process