EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037570 (Gene tree)
Gene ID: 445412
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8036 bases
Position: chr14:9077314-9085349
Accession: ZDB-GENE-040930-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000054709	RNA_pol_L_2	PF13656.6	2.7e-28	1	1
ENSDARP00000054709	RNA_pol_L	PF01193.24	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000054710	-	667	XM_005157141	ENSDARP00000054709	112 (aa)	XP_005157198	Q6DRI4

Gene Model

Click here to download ENSDARG00000037570's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG
dre04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000037570	polr1d	77	34.884	ENSDARG00000035146	polr2j	73	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037570	polr1d	98	66.364	ENSG00000186184	POLR1D	95	66.364	Homo_sapiens
ENSDARG00000037570	polr1d	92	72.115	ENSAPOG00000021882	polr1d	96	73.529	Acanthochromis_polyacanthus
ENSDARG00000037570	polr1d	98	67.273	ENSAMEG00000019095	POLR1D	88	67.273	Ailuropoda_melanoleuca
ENSDARG00000037570	polr1d	93	74.286	ENSACIG00000013328	polr1d	91	74.286	Amphilophus_citrinellus
ENSDARG00000037570	polr1d	94	74.286	ENSAOCG00000018500	polr1d	92	74.286	Amphiprion_ocellaris
ENSDARG00000037570	polr1d	95	74.766	ENSAPEG00000009489	polr1d	94	74.766	Amphiprion_percula
ENSDARG00000037570	polr1d	93	75.000	ENSATEG00000019322	polr1d	91	75.000	Anabas_testudineus
ENSDARG00000037570	polr1d	91	67.647	ENSACAG00000015753	POLR1D	88	67.647	Anolis_carolinensis
ENSDARG00000037570	polr1d	98	66.364	ENSANAG00000024486	POLR1D	83	66.364	Aotus_nancymaae
ENSDARG00000037570	polr1d	97	77.273	ENSACLG00000023805	polr1d	96	77.273	Astatotilapia_calliptera
ENSDARG00000037570	polr1d	98	75.676	ENSAMXG00000036118	polr1d	97	75.676	Astyanax_mexicanus
ENSDARG00000037570	polr1d	98	66.364	ENSBTAG00000033252	-	83	66.364	Bos_taurus
ENSDARG00000037570	polr1d	98	66.364	ENSBTAG00000008642	POLR1D	83	66.364	Bos_taurus
ENSDARG00000037570	polr1d	82	38.043	WBGene00010230	rpac-19	61	38.043	Caenorhabditis_elegans
ENSDARG00000037570	polr1d	98	67.273	ENSCJAG00000044669	POLR1D	83	67.273	Callithrix_jacchus
ENSDARG00000037570	polr1d	98	67.273	ENSCAFG00000006755	POLR1D	83	67.273	Canis_familiaris
ENSDARG00000037570	polr1d	98	66.364	ENSCHIG00000021910	POLR1D	83	66.364	Capra_hircus
ENSDARG00000037570	polr1d	98	65.455	ENSTSYG00000026817	-	83	65.455	Carlito_syrichta
ENSDARG00000037570	polr1d	92	57.143	ENSTSYG00000034852	-	87	57.143	Carlito_syrichta
ENSDARG00000037570	polr1d	58	55.385	ENSCAPG00000006058	-	66	55.385	Cavia_aperea
ENSDARG00000037570	polr1d	59	54.545	ENSCPOG00000030450	-	67	54.545	Cavia_porcellus
ENSDARG00000037570	polr1d	98	50.000	ENSCCAG00000020191	-	81	50.000	Cebus_capucinus
ENSDARG00000037570	polr1d	98	67.273	ENSCCAG00000021349	-	83	67.273	Cebus_capucinus
ENSDARG00000037570	polr1d	96	58.333	ENSCATG00000022900	-	80	58.333	Cercocebus_atys
ENSDARG00000037570	polr1d	98	66.364	ENSCATG00000030710	-	83	66.364	Cercocebus_atys
ENSDARG00000037570	polr1d	98	65.455	ENSCLAG00000017623	POLR1D	89	65.455	Chinchilla_lanigera
ENSDARG00000037570	polr1d	88	70.408	ENSCPBG00000004719	POLR1D	97	70.408	Chrysemys_picta_bellii
ENSDARG00000037570	polr1d	98	66.364	ENSCANG00000028632	-	83	66.364	Colobus_angolensis_palliatus
ENSDARG00000037570	polr1d	98	62.727	ENSCANG00000037694	-	83	62.727	Colobus_angolensis_palliatus
ENSDARG00000037570	polr1d	98	66.364	ENSCGRG00001021251	Polr1d	83	66.364	Cricetulus_griseus_chok1gshd
ENSDARG00000037570	polr1d	98	66.364	ENSCGRG00000011639	Polr1d	83	66.364	Cricetulus_griseus_crigri
ENSDARG00000037570	polr1d	93	75.000	ENSCSEG00000018268	polr1d	92	75.000	Cynoglossus_semilaevis
ENSDARG00000037570	polr1d	96	73.148	ENSCVAG00000018527	polr1d	95	73.148	Cyprinodon_variegatus
ENSDARG00000037570	polr1d	96	65.741	ENSDNOG00000043676	-	81	65.741	Dasypus_novemcinctus
ENSDARG00000037570	polr1d	96	63.889	ENSDNOG00000046247	-	81	63.889	Dasypus_novemcinctus
ENSDARG00000037570	polr1d	98	66.364	ENSDORG00000029155	Polr1d	83	66.364	Dipodomys_ordii
ENSDARG00000037570	polr1d	76	48.235	FBgn0086447	l(2)37Cg	80	48.235	Drosophila_melanogaster
ENSDARG00000037570	polr1d	100	65.179	ENSETEG00000012797	POLR1D	90	65.179	Echinops_telfairi
ENSDARG00000037570	polr1d	86	63.542	ENSEBUG00000011748	polr1d	67	63.542	Eptatretus_burgeri
ENSDARG00000037570	polr1d	96	67.593	ENSEASG00005022487	POLR1D	84	67.593	Equus_asinus_asinus
ENSDARG00000037570	polr1d	98	67.273	ENSEEUG00000013144	POLR1D	89	67.273	Erinaceus_europaeus
ENSDARG00000037570	polr1d	93	75.962	ENSELUG00000005105	rpac2	91	75.962	Esox_lucius
ENSDARG00000037570	polr1d	98	67.273	ENSFCAG00000030162	POLR1D	83	67.273	Felis_catus
ENSDARG00000037570	polr1d	87	71.134	ENSFALG00000011463	POLR1D	96	71.134	Ficedula_albicollis
ENSDARG00000037570	polr1d	98	65.455	ENSFDAG00000004463	POLR1D	83	65.455	Fukomys_damarensis
ENSDARG00000037570	polr1d	97	74.545	ENSFHEG00000015410	polr1d	96	74.545	Fundulus_heteroclitus
ENSDARG00000037570	polr1d	58	67.692	ENSGALG00000007470	POLR1D	64	67.692	Gallus_gallus
ENSDARG00000037570	polr1d	95	74.766	ENSGAFG00000001693	polr1d	94	74.766	Gambusia_affinis
ENSDARG00000037570	polr1d	96	74.766	ENSGACG00000018585	polr1d	91	74.766	Gasterosteus_aculeatus
ENSDARG00000037570	polr1d	96	69.444	ENSGAGG00000008503	POLR1D	95	69.444	Gopherus_agassizii
ENSDARG00000037570	polr1d	98	66.364	ENSGGOG00000004235	POLR1D	83	66.364	Gorilla_gorilla
ENSDARG00000037570	polr1d	97	77.273	ENSHBUG00000002111	polr1d	96	77.273	Haplochromis_burtoni
ENSDARG00000037570	polr1d	98	64.545	ENSHGLG00000003202	POLR1D	83	64.545	Heterocephalus_glaber_female
ENSDARG00000037570	polr1d	98	64.545	ENSHGLG00100009393	POLR1D	83	64.545	Heterocephalus_glaber_male
ENSDARG00000037570	polr1d	96	72.222	ENSHCOG00000003258	polr1d	95	72.222	Hippocampus_comes
ENSDARG00000037570	polr1d	92	79.612	ENSIPUG00000014810	polr1d	90	79.612	Ictalurus_punctatus
ENSDARG00000037570	polr1d	98	66.364	ENSSTOG00000013877	POLR1D	83	66.364	Ictidomys_tridecemlineatus
ENSDARG00000037570	polr1d	98	50.909	ENSJJAG00000021667	-	65	50.909	Jaculus_jaculus
ENSDARG00000037570	polr1d	98	64.545	ENSJJAG00000022671	-	92	64.545	Jaculus_jaculus
ENSDARG00000037570	polr1d	96	72.897	ENSKMAG00000015256	polr1d	94	72.897	Kryptolebias_marmoratus
ENSDARG00000037570	polr1d	90	77.228	ENSLBEG00000015919	polr1d	89	77.228	Labrus_bergylta
ENSDARG00000037570	polr1d	96	64.486	ENSLACG00000006810	POLR1D	89	64.486	Latimeria_chalumnae
ENSDARG00000037570	polr1d	58	73.846	ENSLOCG00000014976	polr1d	88	73.846	Lepisosteus_oculatus
ENSDARG00000037570	polr1d	96	65.741	ENSLAFG00000032290	POLR1D	81	65.741	Loxodonta_africana
ENSDARG00000037570	polr1d	98	66.364	ENSMFAG00000045264	POLR1D	85	66.364	Macaca_fascicularis
ENSDARG00000037570	polr1d	72	65.432	ENSMMUG00000041570	-	73	65.432	Macaca_mulatta
ENSDARG00000037570	polr1d	98	66.364	ENSMMUG00000020386	POLR1D	95	66.364	Macaca_mulatta
ENSDARG00000037570	polr1d	84	58.511	ENSMNEG00000038120	-	73	58.511	Macaca_nemestrina
ENSDARG00000037570	polr1d	98	66.364	ENSMNEG00000008630	-	83	66.364	Macaca_nemestrina
ENSDARG00000037570	polr1d	98	56.364	ENSMLEG00000032251	-	82	56.364	Mandrillus_leucophaeus
ENSDARG00000037570	polr1d	98	66.364	ENSMLEG00000041048	-	83	66.364	Mandrillus_leucophaeus
ENSDARG00000037570	polr1d	90	74.257	ENSMAMG00000014834	polr1d	94	74.257	Mastacembelus_armatus
ENSDARG00000037570	polr1d	90	77.451	ENSMZEG00005006638	polr1d	90	77.451	Maylandia_zebra
ENSDARG00000037570	polr1d	82	71.739	ENSMGAG00000005322	POLR1D	84	71.739	Meleagris_gallopavo
ENSDARG00000037570	polr1d	98	66.364	ENSMAUG00000001946	Polr1d	83	66.364	Mesocricetus_auratus
ENSDARG00000037570	polr1d	98	65.455	ENSMICG00000016883	-	83	65.455	Microcebus_murinus
ENSDARG00000037570	polr1d	98	55.455	ENSMICG00000007349	-	82	55.455	Microcebus_murinus
ENSDARG00000037570	polr1d	98	66.364	ENSMOCG00000021288	Polr1d	83	66.364	Microtus_ochrogaster
ENSDARG00000037570	polr1d	93	76.923	ENSMMOG00000009605	polr1d	91	76.923	Mola_mola
ENSDARG00000037570	polr1d	97	69.091	ENSMODG00000023881	POLR1D	96	69.091	Monodelphis_domestica
ENSDARG00000037570	polr1d	97	70.909	ENSMALG00000010652	polr1d	96	70.909	Monopterus_albus
ENSDARG00000037570	polr1d	94	65.714	MGP_CAROLIEiJ_G0028034	Polr1d	79	65.714	Mus_caroli
ENSDARG00000037570	polr1d	98	63.636	ENSMUSG00000029642	Polr1d	83	63.636	Mus_musculus
ENSDARG00000037570	polr1d	98	63.636	MGP_PahariEiJ_G0024600	Polr1d	83	63.636	Mus_pahari
ENSDARG00000037570	polr1d	98	63.636	MGP_SPRETEiJ_G0029032	Polr1d	83	63.636	Mus_spretus
ENSDARG00000037570	polr1d	98	66.364	ENSMLUG00000027169	-	83	66.364	Myotis_lucifugus
ENSDARG00000037570	polr1d	93	61.538	ENSMLUG00000004118	-	78	61.538	Myotis_lucifugus
ENSDARG00000037570	polr1d	98	67.273	ENSNGAG00000006014	Polr1d	95	67.273	Nannospalax_galili
ENSDARG00000037570	polr1d	97	77.273	ENSNBRG00000020327	polr1d	96	77.273	Neolamprologus_brichardi
ENSDARG00000037570	polr1d	98	66.364	ENSNLEG00000000358	POLR1D	83	66.364	Nomascus_leucogenys
ENSDARG00000037570	polr1d	96	56.075	ENSODEG00000014801	-	78	56.075	Octodon_degus
ENSDARG00000037570	polr1d	96	67.290	ENSODEG00000005294	-	80	67.290	Octodon_degus
ENSDARG00000037570	polr1d	91	72.549	ENSOANG00000008708	-	94	72.549	Ornithorhynchus_anatinus
ENSDARG00000037570	polr1d	98	66.364	ENSOCUG00000015706	POLR1D	67	66.364	Oryctolagus_cuniculus
ENSDARG00000037570	polr1d	93	71.154	ENSORLG00000010257	polr1d	91	71.154	Oryzias_latipes
ENSDARG00000037570	polr1d	97	70.000	ENSORLG00020000533	polr1d	74	70.000	Oryzias_latipes_hni
ENSDARG00000037570	polr1d	93	72.115	ENSORLG00015013267	polr1d	69	72.115	Oryzias_latipes_hsok
ENSDARG00000037570	polr1d	98	69.369	ENSOMEG00000014912	polr1d	74	69.369	Oryzias_melastigma
ENSDARG00000037570	polr1d	98	65.455	ENSOGAG00000014601	POLR1D	83	65.455	Otolemur_garnettii
ENSDARG00000037570	polr1d	98	66.364	ENSOARG00000017005	POLR1D	85	66.364	Ovis_aries
ENSDARG00000037570	polr1d	96	66.667	ENSPPAG00000028138	POLR1D	81	66.667	Pan_paniscus
ENSDARG00000037570	polr1d	98	67.273	ENSPPRG00000003381	POLR1D	83	67.273	Panthera_pardus
ENSDARG00000037570	polr1d	98	67.273	ENSPTIG00000018137	POLR1D	83	67.273	Panthera_tigris_altaica
ENSDARG00000037570	polr1d	98	66.364	ENSPTRG00000005734	POLR1D	83	66.364	Pan_troglodytes
ENSDARG00000037570	polr1d	98	55.455	ENSPANG00000035051	-	82	55.455	Papio_anubis
ENSDARG00000037570	polr1d	98	66.364	ENSPANG00000020259	-	83	66.364	Papio_anubis
ENSDARG00000037570	polr1d	99	70.270	ENSPKIG00000021891	polr1d	97	57.377	Paramormyrops_kingsleyae
ENSDARG00000037570	polr1d	98	72.072	ENSPSIG00000011822	POLR1D	86	72.072	Pelodiscus_sinensis
ENSDARG00000037570	polr1d	96	59.813	ENSPMGG00000012998	POLR1D	78	59.813	Periophthalmus_magnuspinnatus
ENSDARG00000037570	polr1d	96	67.290	ENSPMGG00000010359	polr1d	93	67.290	Periophthalmus_magnuspinnatus
ENSDARG00000037570	polr1d	98	64.545	ENSPEMG00000006336	-	85	64.545	Peromyscus_maniculatus_bairdii
ENSDARG00000037570	polr1d	92	59.223	ENSPMAG00000004228	polr1d	86	59.223	Petromyzon_marinus
ENSDARG00000037570	polr1d	97	68.182	ENSPCIG00000001673	POLR1D	96	68.182	Phascolarctos_cinereus
ENSDARG00000037570	polr1d	95	75.701	ENSPFOG00000023343	polr1d	99	76.744	Poecilia_formosa
ENSDARG00000037570	polr1d	95	75.701	ENSPLAG00000009675	polr1d	94	75.701	Poecilia_latipinna
ENSDARG00000037570	polr1d	95	75.701	ENSPMEG00000004628	polr1d	94	75.701	Poecilia_mexicana
ENSDARG00000037570	polr1d	95	75.701	ENSPREG00000022032	polr1d	94	75.701	Poecilia_reticulata
ENSDARG00000037570	polr1d	98	64.545	ENSPCOG00000028175	POLR1D	83	64.545	Propithecus_coquereli
ENSDARG00000037570	polr1d	97	77.273	ENSPNYG00000000107	polr1d	96	77.273	Pundamilia_nyererei
ENSDARG00000037570	polr1d	95	72.897	ENSPNAG00000001512	polr1d	90	72.897	Pygocentrus_nattereri
ENSDARG00000037570	polr1d	98	66.364	ENSRBIG00000036378	-	83	66.364	Rhinopithecus_bieti
ENSDARG00000037570	polr1d	98	62.727	ENSRBIG00000000336	-	83	62.727	Rhinopithecus_bieti
ENSDARG00000037570	polr1d	98	66.364	ENSRROG00000042232	-	83	66.364	Rhinopithecus_roxellana
ENSDARG00000037570	polr1d	98	63.636	ENSRROG00000026751	-	83	63.636	Rhinopithecus_roxellana
ENSDARG00000037570	polr1d	81	48.352	YNL113W	RPC19	64	48.352	Saccharomyces_cerevisiae
ENSDARG00000037570	polr1d	98	60.909	ENSSBOG00000030146	-	79	60.909	Saimiri_boliviensis_boliviensis
ENSDARG00000037570	polr1d	98	66.364	ENSSBOG00000028482	-	83	66.364	Saimiri_boliviensis_boliviensis
ENSDARG00000037570	polr1d	96	68.224	ENSSHAG00000001190	POLR1D	83	68.224	Sarcophilus_harrisii
ENSDARG00000037570	polr1d	98	72.727	ENSSFOG00015011375	polr1d	96	72.727	Scleropages_formosus
ENSDARG00000037570	polr1d	93	75.962	ENSSMAG00000011861	polr1d	91	75.962	Scophthalmus_maximus
ENSDARG00000037570	polr1d	93	75.962	ENSSDUG00000011930	polr1d	91	75.962	Seriola_dumerili
ENSDARG00000037570	polr1d	86	75.000	ENSSLDG00000023871	polr1d	81	75.000	Seriola_lalandi_dorsalis
ENSDARG00000037570	polr1d	98	67.273	ENSSARG00000007840	POLR1D	83	67.273	Sorex_araneus
ENSDARG00000037570	polr1d	91	69.608	ENSSPUG00000005786	POLR1D	92	67.593	Sphenodon_punctatus
ENSDARG00000037570	polr1d	97	76.364	ENSSPAG00000011764	polr1d	96	76.364	Stegastes_partitus
ENSDARG00000037570	polr1d	96	64.815	ENSSSCG00000009310	POLR1D	81	64.815	Sus_scrofa
ENSDARG00000037570	polr1d	86	70.833	ENSTGUG00000005450	POLR1D	100	70.833	Taeniopygia_guttata
ENSDARG00000037570	polr1d	97	70.909	ENSTRUG00000019741	polr1d	96	70.909	Takifugu_rubripes
ENSDARG00000037570	polr1d	98	65.455	ENSTBEG00000007006	POLR1D	89	65.455	Tupaia_belangeri
ENSDARG00000037570	polr1d	98	67.273	ENSUAMG00000011413	POLR1D	83	67.273	Ursus_americanus
ENSDARG00000037570	polr1d	98	67.273	ENSUMAG00000016968	POLR1D	86	67.273	Ursus_maritimus
ENSDARG00000037570	polr1d	98	67.273	ENSVVUG00000009216	POLR1D	83	67.273	Vulpes_vulpes
ENSDARG00000037570	polr1d	85	75.789	ENSXCOG00000011731	polr1d	73	75.789	Xiphophorus_couchianus
ENSDARG00000037570	polr1d	85	74.737	ENSXMAG00000017538	polr1d	73	74.737	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0042254	ribosome biogenesis	27448281.	IMP	Process
GO:0046983	protein dimerization activity	-	IEA	Function
GO:0048703	embryonic viscerocranium morphogenesis	27448281.	IMP	Process
GO:0051216	cartilage development	27448281.	IMP	Process