EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037773 (Gene tree)
Gene ID: 368248
Gene Symbol: rybpa
Alias: cb337|rybp|wu:fi34f03
Full Name: RING1 and YY1 binding protein a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 23717 bases
Position: chr23:10762684-10786400
Accession: ZDB-GENE-030424-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000055037	zf-RanBP	PF00641.18	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000055038	-	2262	-	ENSDARP00000055037	384 (aa)	-	F1R1S9

Gene Model

Click here to download ENSDARG00000037773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000037773	rybpa	50	94.286	ENSDARG00000053459	rybpb	83	73.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037773	rybpa	63	82.418	ENSAPOG00000014342	rybpb	90	75.229	Acanthochromis_polyacanthus
ENSDARG00000037773	rybpa	50	85.714	ENSACIG00000021280	rybpb	89	85.714	Amphilophus_citrinellus
ENSDARG00000037773	rybpa	63	82.418	ENSAOCG00000001679	rybpb	75	82.418	Amphiprion_ocellaris
ENSDARG00000037773	rybpa	63	82.418	ENSAPEG00000021704	rybpb	75	82.418	Amphiprion_percula
ENSDARG00000037773	rybpa	63	69.173	ENSATEG00000008482	rybpb	85	75.455	Anabas_testudineus
ENSDARG00000037773	rybpa	50	94.203	ENSACAG00000014789	RYBP	86	85.714	Anolis_carolinensis
ENSDARG00000037773	rybpa	56	85.714	ENSACLG00000023062	rybpb	90	76.364	Astatotilapia_calliptera
ENSDARG00000037773	rybpa	52	95.652	ENSAMXG00000034604	rybpb	86	89.286	Astyanax_mexicanus
ENSDARG00000037773	rybpa	100	70.984	ENSAMXG00000043350	rybpa	91	69.948	Astyanax_mexicanus
ENSDARG00000037773	rybpa	53	86.301	ENSCSEG00000007805	rybpb	87	80.220	Cynoglossus_semilaevis
ENSDARG00000037773	rybpa	82	60.000	ENSCVAG00000020045	rybpb	84	83.333	Cyprinodon_variegatus
ENSDARG00000037773	rybpa	50	91.379	ENSEEUG00000011620	-	100	75.000	Erinaceus_europaeus
ENSDARG00000037773	rybpa	57	89.412	ENSELUG00000003503	rybpb	93	88.372	Esox_lucius
ENSDARG00000037773	rybpa	50	84.524	ENSFHEG00000017560	rybpb	72	84.524	Fundulus_heteroclitus
ENSDARG00000037773	rybpa	64	75.926	ENSGAFG00000015676	rybpb	90	75.229	Gambusia_affinis
ENSDARG00000037773	rybpa	51	83.516	ENSGACG00000011809	rybpb	62	83.516	Gasterosteus_aculeatus
ENSDARG00000037773	rybpa	56	85.714	ENSHBUG00000010844	rybpb	90	76.364	Haplochromis_burtoni
ENSDARG00000037773	rybpa	51	77.011	ENSHGLG00000009354	-	89	77.011	Heterocephalus_glaber_female
ENSDARG00000037773	rybpa	51	77.011	ENSHGLG00100001264	-	89	77.011	Heterocephalus_glaber_male
ENSDARG00000037773	rybpa	64	69.912	ENSHCOG00000010777	rybpb	80	74.074	Hippocampus_comes
ENSDARG00000037773	rybpa	89	73.203	ENSIPUG00000007091	rybpa	100	90.476	Ictalurus_punctatus
ENSDARG00000037773	rybpa	73	75.962	ENSIPUG00000001221	rybpb	86	88.095	Ictalurus_punctatus
ENSDARG00000037773	rybpa	83	67.227	ENSKMAG00000004423	rybpb	90	75.229	Kryptolebias_marmoratus
ENSDARG00000037773	rybpa	56	86.905	ENSLBEG00000017510	rybpb	68	86.905	Labrus_bergylta
ENSDARG00000037773	rybpa	74	63.846	ENSMAMG00000023430	rybpb	88	75.229	Mastacembelus_armatus
ENSDARG00000037773	rybpa	56	85.714	ENSMZEG00005008698	rybpb	90	76.364	Maylandia_zebra
ENSDARG00000037773	rybpa	53	87.838	ENSMMOG00000010572	rybpb	85	86.905	Mola_mola
ENSDARG00000037773	rybpa	58	85.714	ENSMALG00000008839	rybpb	85	85.714	Monopterus_albus
ENSDARG00000037773	rybpa	56	85.714	ENSNBRG00000023999	rybpb	90	76.364	Neolamprologus_brichardi
ENSDARG00000037773	rybpa	56	85.714	ENSONIG00000020265	rybpb	90	76.364	Oreochromis_niloticus
ENSDARG00000037773	rybpa	81	65.574	ENSORLG00000030260	rybpb	85	75.229	Oryzias_latipes
ENSDARG00000037773	rybpa	81	65.574	ENSORLG00020003724	rybpb	85	75.229	Oryzias_latipes_hni
ENSDARG00000037773	rybpa	81	66.393	ENSORLG00015021068	rybpb	85	75.229	Oryzias_latipes_hsok
ENSDARG00000037773	rybpa	64	68.148	ENSOMEG00000001230	rybpb	85	75.229	Oryzias_melastigma
ENSDARG00000037773	rybpa	52	95.122	ENSPKIG00000021549	rybpb	94	95.122	Paramormyrops_kingsleyae
ENSDARG00000037773	rybpa	58	70.435	ENSPKIG00000024534	rybpa	78	70.435	Paramormyrops_kingsleyae
ENSDARG00000037773	rybpa	64	67.910	ENSPMGG00000008842	rybpb	91	73.394	Periophthalmus_magnuspinnatus
ENSDARG00000037773	rybpa	82	59.286	ENSPFOG00000000577	rybpb	90	75.229	Poecilia_formosa
ENSDARG00000037773	rybpa	76	66.667	ENSPREG00000000603	rybpb	90	75.229	Poecilia_reticulata
ENSDARG00000037773	rybpa	56	85.714	ENSPNYG00000003852	rybpb	90	76.364	Pundamilia_nyererei
ENSDARG00000037773	rybpa	58	91.304	ENSPNAG00000026904	rybpb	85	84.524	Pygocentrus_nattereri
ENSDARG00000037773	rybpa	100	72.727	ENSPNAG00000006083	rybpa	93	72.468	Pygocentrus_nattereri
ENSDARG00000037773	rybpa	73	63.571	ENSSFOG00015020526	rybp	100	63.571	Scleropages_formosus
ENSDARG00000037773	rybpa	71	68.148	ENSSDUG00000012000	rybpb	90	75.229	Seriola_dumerili
ENSDARG00000037773	rybpa	71	68.148	ENSSLDG00000013888	rybpb	90	75.229	Seriola_lalandi_dorsalis
ENSDARG00000037773	rybpa	74	85.714	ENSSPAG00000004173	rybpb	90	75.229	Stegastes_partitus
ENSDARG00000037773	rybpa	50	84.524	ENSTRUG00000009347	rybpb	64	77.083	Takifugu_rubripes
ENSDARG00000037773	rybpa	84	67.227	ENSTNIG00000007355	rybpb	83	75.229	Tetraodon_nigroviridis
ENSDARG00000037773	rybpa	68	94.286	ENSXETG00000015914	rybp	99	47.179	Xenopus_tropicalis
ENSDARG00000037773	rybpa	50	84.524	ENSXCOG00000009651	rybpb	92	84.524	Xiphophorus_couchianus
ENSDARG00000037773	rybpa	67	83.333	ENSXMAG00000027089	rybpb	90	75.229	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006915	apoptotic process	-	IEA	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function