EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000037919 (Gene tree)
Gene ID
445396
Gene Symbol
rbbp6
Alias
im:7158869|my038-like|rbbp6l
Full Name
retinoblastoma binding protein 6
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
14800 bases
Position
chr3:35406395-35421194
Accession
ZDB-GENE-040930-5
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000125662zf-CCHC_2PF13696.66.9e-0911
ENSDARP00000093768zf-CCHC_2PF13696.67.1e-0911
ENSDARP00000125662zf-CCHCPF00098.238.5e-0511
ENSDARP00000093768zf-CCHCPF00098.238.7e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000102994-5301XM_005164017ENSDARP000000937681766 (aa)XP_005164074E7EXE9
ENSDART00000055266-1339-ENSDARP00000055265142 (aa)-Q6DRF1
ENSDART00000150918-6442XM_005164019ENSDARP000001256621741 (aa)XP_005164076I3IS00
Gene Model
Click here to download ENSDARG00000037919's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037919's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000037919rbbp65758.002ENSAMXG00000009049-5757.336Astyanax_mexicanus
ENSDARG00000037919rbbp68859.449ENSIPUG00000001617-7677.739Ictalurus_punctatus
ENSDARG00000037919rbbp65048.469ENSPFOG00000022154-9665.128Poecilia_formosa
ENSDARG00000037919rbbp69345.367ENSXETG00000024429rbbp65335.234Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0004842ubiquitin-protein transferase activity-IEAFunction
GO:0006397mRNA processing-IEAProcess
GO:0008270zinc ion binding-IEAFunction
GO:0016567protein ubiquitination-IEAProcess
GO:0046872metal ion binding-IEAFunction
GO:0061630ubiquitin protein ligase activity-IEAFunction

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