EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037928 (Gene tree)
Gene ID: 503932
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 42
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 13567 bases
Position: chr3:31879442-31893008
Accession: ZDB-GENE-050706-53
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000108493	ResIII	PF04851.15	5e-06	1	1
ENSDARP00000108493	DEAD	PF00270.29	5.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000151504	-	577	-	-	- (aa)	-	-
ENSDART00000127297	-	3693	-	ENSDARP00000108493	908 (aa)	-	F1QSB8

Gene Model

Click here to download ENSDARG00000037928's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000037928	ddx42	51	36.327	ENSDARG00000020573	ddx3xa	63	37.004
ENSDARG00000037928	ddx42	50	37.578	ENSDARG00000005774	ddx3xb	98	41.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037928	ddx42	99	70.860	ENSG00000198231	DDX42	99	80.808	Homo_sapiens
ENSDARG00000037928	ddx42	93	82.258	ENSAPOG00000017675	ddx42	99	80.464	Acanthochromis_polyacanthus
ENSDARG00000037928	ddx42	99	70.564	ENSAMEG00000003200	DDX42	100	70.335	Ailuropoda_melanoleuca
ENSDARG00000037928	ddx42	84	75.000	ENSACIG00000007376	ddx42	99	78.981	Amphilophus_citrinellus
ENSDARG00000037928	ddx42	100	77.249	ENSAOCG00000003520	ddx42	100	78.753	Amphiprion_ocellaris
ENSDARG00000037928	ddx42	100	78.002	ENSAPEG00000000984	ddx42	100	78.981	Amphiprion_percula
ENSDARG00000037928	ddx42	100	77.743	ENSATEG00000022920	ddx42	100	79.468	Anabas_testudineus
ENSDARG00000037928	ddx42	99	70.137	ENSAPLG00000010544	DDX42	99	69.433	Anas_platyrhynchos
ENSDARG00000037928	ddx42	99	71.067	ENSACAG00000003994	DDX42	99	70.940	Anolis_carolinensis
ENSDARG00000037928	ddx42	99	71.825	ENSANAG00000035693	DDX42	89	82.992	Aotus_nancymaae
ENSDARG00000037928	ddx42	92	81.915	ENSACLG00000025113	ddx42	100	79.679	Astatotilapia_calliptera
ENSDARG00000037928	ddx42	92	84.670	ENSAMXG00000011435	ddx42	100	80.842	Astyanax_mexicanus
ENSDARG00000037928	ddx42	99	69.055	ENSBTAG00000021058	DDX42	88	82.047	Bos_taurus
ENSDARG00000037928	ddx42	66	53.218	WBGene00008119	C46F11.4	79	53.023	Caenorhabditis_elegans
ENSDARG00000037928	ddx42	99	71.932	ENSCJAG00000019649	DDX42	98	80.996	Callithrix_jacchus
ENSDARG00000037928	ddx42	99	70.188	ENSCAFG00000012818	DDX42	100	69.916	Canis_familiaris
ENSDARG00000037928	ddx42	99	70.293	ENSCAFG00020026631	DDX42	100	70.021	Canis_lupus_dingo
ENSDARG00000037928	ddx42	100	71.353	ENSCHIG00000014431	DDX42	100	70.394	Capra_hircus
ENSDARG00000037928	ddx42	100	69.937	ENSTSYG00000001380	DDX42	100	69.570	Carlito_syrichta
ENSDARG00000037928	ddx42	74	59.483	ENSCAPG00000013621	DDX42	83	62.378	Cavia_aperea
ENSDARG00000037928	ddx42	99	70.662	ENSCPOG00000005633	DDX42	100	69.470	Cavia_porcellus
ENSDARG00000037928	ddx42	99	66.632	ENSCCAG00000020612	DDX42	88	82.992	Cebus_capucinus
ENSDARG00000037928	ddx42	99	72.454	ENSCATG00000030490	DDX42	100	69.678	Cercocebus_atys
ENSDARG00000037928	ddx42	99	71.234	ENSCLAG00000003497	DDX42	100	69.804	Chinchilla_lanigera
ENSDARG00000037928	ddx42	64	87.273	ENSCHOG00000006241	DDX42	62	85.714	Choloepus_hoffmanni
ENSDARG00000037928	ddx42	99	70.558	ENSCPBG00000026682	DDX42	99	70.934	Chrysemys_picta_bellii
ENSDARG00000037928	ddx42	99	72.222	ENSCANG00000034663	DDX42	91	83.072	Colobus_angolensis_palliatus
ENSDARG00000037928	ddx42	99	70.829	ENSCGRG00001009775	Ddx42	100	69.597	Cricetulus_griseus_chok1gshd
ENSDARG00000037928	ddx42	99	70.829	ENSCGRG00000011718	Ddx42	100	69.597	Cricetulus_griseus_crigri
ENSDARG00000037928	ddx42	92	80.941	ENSCSEG00000021574	ddx42	100	76.582	Cynoglossus_semilaevis
ENSDARG00000037928	ddx42	100	77.336	ENSCVAG00000011404	ddx42	100	77.826	Cyprinodon_variegatus
ENSDARG00000037928	ddx42	99	69.584	ENSDNOG00000007961	DDX42	100	69.584	Dasypus_novemcinctus
ENSDARG00000037928	ddx42	99	65.405	ENSDORG00000004199	Ddx42	100	63.543	Dipodomys_ordii
ENSDARG00000037928	ddx42	67	60.743	FBgn0036104	CG6418	84	58.657	Drosophila_melanogaster
ENSDARG00000037928	ddx42	83	72.200	ENSEBUG00000001155	ddx42	88	73.361	Eptatretus_burgeri
ENSDARG00000037928	ddx42	100	70.947	ENSEASG00005013089	DDX42	90	82.812	Equus_asinus_asinus
ENSDARG00000037928	ddx42	99	70.115	ENSECAG00000022684	DDX42	100	69.552	Equus_caballus
ENSDARG00000037928	ddx42	60	94.286	ENSEEUG00000009144	DDX42	68	83.694	Erinaceus_europaeus
ENSDARG00000037928	ddx42	100	78.413	ENSELUG00000020593	ddx42	100	77.603	Esox_lucius
ENSDARG00000037928	ddx42	99	70.742	ENSFCAG00000003499	DDX42	100	69.381	Felis_catus
ENSDARG00000037928	ddx42	90	76.428	ENSFALG00000004675	DDX42	66	81.333	Ficedula_albicollis
ENSDARG00000037928	ddx42	99	70.366	ENSFDAG00000020516	DDX42	99	70.551	Fukomys_damarensis
ENSDARG00000037928	ddx42	100	77.634	ENSFHEG00000023290	ddx42	100	77.814	Fundulus_heteroclitus
ENSDARG00000037928	ddx42	78	81.039	ENSGMOG00000004595	ddx42	88	81.180	Gadus_morhua
ENSDARG00000037928	ddx42	99	69.278	ENSGALG00000000581	DDX42	99	68.144	Gallus_gallus
ENSDARG00000037928	ddx42	95	78.013	ENSGAFG00000011846	ddx42	97	78.160	Gambusia_affinis
ENSDARG00000037928	ddx42	100	73.889	ENSGACG00000009782	ddx42	100	72.168	Gasterosteus_aculeatus
ENSDARG00000037928	ddx42	99	71.251	ENSGAGG00000024411	DDX42	99	70.890	Gopherus_agassizii
ENSDARG00000037928	ddx42	99	71.718	ENSGGOG00000006779	DDX42	88	82.992	Gorilla_gorilla
ENSDARG00000037928	ddx42	92	81.915	ENSHBUG00000008705	ddx42	100	79.358	Haplochromis_burtoni
ENSDARG00000037928	ddx42	99	67.192	ENSHGLG00000010024	DDX42	99	65.642	Heterocephalus_glaber_female
ENSDARG00000037928	ddx42	99	70.293	ENSHGLG00100004479	-	100	69.916	Heterocephalus_glaber_male
ENSDARG00000037928	ddx42	94	54.057	ENSHGLG00100007138	-	76	61.166	Heterocephalus_glaber_male
ENSDARG00000037928	ddx42	100	73.846	ENSHCOG00000003357	ddx42	100	74.533	Hippocampus_comes
ENSDARG00000037928	ddx42	100	80.283	ENSIPUG00000013327	ddx42	100	81.699	Ictalurus_punctatus
ENSDARG00000037928	ddx42	99	70.637	ENSSTOG00000008922	DDX42	99	70.657	Ictidomys_tridecemlineatus
ENSDARG00000037928	ddx42	99	71.828	ENSJJAG00000011727	Ddx42	100	69.968	Jaculus_jaculus
ENSDARG00000037928	ddx42	100	76.915	ENSKMAG00000009914	ddx42	100	77.553	Kryptolebias_marmoratus
ENSDARG00000037928	ddx42	92	75.149	ENSLBEG00000004687	ddx42	76	86.519	Labrus_bergylta
ENSDARG00000037928	ddx42	99	71.033	ENSLACG00000013476	DDX42	97	71.905	Latimeria_chalumnae
ENSDARG00000037928	ddx42	100	78.930	ENSLOCG00000011764	ddx42	100	77.696	Lepisosteus_oculatus
ENSDARG00000037928	ddx42	100	71.039	ENSLAFG00000003249	DDX42	100	69.215	Loxodonta_africana
ENSDARG00000037928	ddx42	99	72.329	ENSMFAG00000031356	DDX42	100	69.543	Macaca_fascicularis
ENSDARG00000037928	ddx42	99	72.377	ENSMMUG00000016762	DDX42	87	82.992	Macaca_mulatta
ENSDARG00000037928	ddx42	99	72.329	ENSMNEG00000038250	DDX42	100	69.543	Macaca_nemestrina
ENSDARG00000037928	ddx42	99	70.177	ENSMLEG00000043080	DDX42	82	79.875	Mandrillus_leucophaeus
ENSDARG00000037928	ddx42	94	80.876	ENSMAMG00000021888	ddx42	98	78.211	Mastacembelus_armatus
ENSDARG00000037928	ddx42	92	81.915	ENSMZEG00005023103	ddx42	100	79.679	Maylandia_zebra
ENSDARG00000037928	ddx42	99	69.637	ENSMGAG00000001822	DDX42	99	68.177	Meleagris_gallopavo
ENSDARG00000037928	ddx42	77	76.569	ENSMAUG00000020774	-	87	80.179	Mesocricetus_auratus
ENSDARG00000037928	ddx42	99	70.903	ENSMICG00000009952	DDX42	100	70.276	Microcebus_murinus
ENSDARG00000037928	ddx42	99	71.005	ENSMOCG00000015504	Ddx42	99	69.303	Microtus_ochrogaster
ENSDARG00000037928	ddx42	93	76.663	ENSMMOG00000016963	ddx42	86	76.114	Mola_mola
ENSDARG00000037928	ddx42	52	83.898	ENSMODG00000009917	-	98	83.898	Monodelphis_domestica
ENSDARG00000037928	ddx42	100	79.117	ENSMALG00000007800	ddx42	100	79.162	Monopterus_albus
ENSDARG00000037928	ddx42	99	70.742	MGP_CAROLIEiJ_G0017314	Ddx42	99	69.358	Mus_caroli
ENSDARG00000037928	ddx42	99	70.637	ENSMUSG00000020705	Ddx42	99	69.286	Mus_musculus
ENSDARG00000037928	ddx42	74	84.615	MGP_PahariEiJ_G0018444	-	97	83.599	Mus_pahari
ENSDARG00000037928	ddx42	99	70.742	MGP_SPRETEiJ_G0018158	Ddx42	90	78.788	Mus_spretus
ENSDARG00000037928	ddx42	99	70.093	ENSMPUG00000014921	DDX42	100	69.597	Mustela_putorius_furo
ENSDARG00000037928	ddx42	99	69.247	ENSMLUG00000011645	DDX42	99	68.191	Myotis_lucifugus
ENSDARG00000037928	ddx42	99	71.564	ENSNGAG00000021897	Ddx42	99	70.428	Nannospalax_galili
ENSDARG00000037928	ddx42	92	80.401	ENSNBRG00000004466	ddx42	100	78.182	Neolamprologus_brichardi
ENSDARG00000037928	ddx42	99	71.795	ENSNLEG00000004248	DDX42	90	82.992	Nomascus_leucogenys
ENSDARG00000037928	ddx42	75	71.404	ENSMEUG00000013227	-	71	71.404	Notamacropus_eugenii
ENSDARG00000037928	ddx42	99	70.332	ENSOPRG00000014960	DDX42	100	69.719	Ochotona_princeps
ENSDARG00000037928	ddx42	99	68.520	ENSODEG00000007810	DDX42	100	66.598	Octodon_degus
ENSDARG00000037928	ddx42	92	81.915	ENSONIG00000000734	ddx42	100	79.893	Oreochromis_niloticus
ENSDARG00000037928	ddx42	59	82.778	ENSOANG00000000265	DDX42	97	82.476	Ornithorhynchus_anatinus
ENSDARG00000037928	ddx42	99	72.470	ENSOCUG00000004304	DDX42	88	71.632	Oryctolagus_cuniculus
ENSDARG00000037928	ddx42	100	78.664	ENSORLG00000002395	ddx42	98	78.219	Oryzias_latipes
ENSDARG00000037928	ddx42	100	77.503	ENSORLG00020011621	ddx42	100	78.349	Oryzias_latipes_hni
ENSDARG00000037928	ddx42	100	77.527	ENSORLG00015004487	ddx42	100	78.028	Oryzias_latipes_hsok
ENSDARG00000037928	ddx42	100	79.032	ENSOMEG00000020093	ddx42	100	78.863	Oryzias_melastigma
ENSDARG00000037928	ddx42	99	70.417	ENSOGAG00000006872	DDX42	100	69.529	Otolemur_garnettii
ENSDARG00000037928	ddx42	100	70.166	ENSOARG00000013540	DDX42	100	70.188	Ovis_aries
ENSDARG00000037928	ddx42	99	71.718	ENSPPAG00000007496	DDX42	100	69.729	Pan_paniscus
ENSDARG00000037928	ddx42	99	70.742	ENSPPRG00000002740	DDX42	100	69.207	Panthera_pardus
ENSDARG00000037928	ddx42	99	70.533	ENSPTIG00000009932	DDX42	100	69.516	Panthera_tigris_altaica
ENSDARG00000037928	ddx42	99	71.718	ENSPTRG00000009523	DDX42	100	69.729	Pan_troglodytes
ENSDARG00000037928	ddx42	99	72.454	ENSPANG00000020990	DDX42	83	82.732	Papio_anubis
ENSDARG00000037928	ddx42	100	78.493	ENSPKIG00000002901	ddx42	100	78.384	Paramormyrops_kingsleyae
ENSDARG00000037928	ddx42	87	77.903	ENSPSIG00000010289	DDX42	95	78.195	Pelodiscus_sinensis
ENSDARG00000037928	ddx42	92	75.701	ENSPMGG00000009323	ddx42	100	73.751	Periophthalmus_magnuspinnatus
ENSDARG00000037928	ddx42	99	70.324	ENSPEMG00000006755	Ddx42	100	69.556	Peromyscus_maniculatus_bairdii
ENSDARG00000037928	ddx42	82	70.428	ENSPMAG00000005580	ddx42	94	72.765	Petromyzon_marinus
ENSDARG00000037928	ddx42	99	70.704	ENSPCIG00000009093	DDX42	100	69.255	Phascolarctos_cinereus
ENSDARG00000037928	ddx42	100	76.390	ENSPFOG00000014104	ddx42	100	76.101	Poecilia_formosa
ENSDARG00000037928	ddx42	100	76.285	ENSPLAG00000010522	ddx42	100	75.996	Poecilia_latipinna
ENSDARG00000037928	ddx42	100	76.379	ENSPMEG00000010744	ddx42	100	75.780	Poecilia_mexicana
ENSDARG00000037928	ddx42	100	75.129	ENSPREG00000009926	ddx42	100	74.742	Poecilia_reticulata
ENSDARG00000037928	ddx42	99	68.789	ENSPPYG00000008531	DDX42	99	67.009	Pongo_abelii
ENSDARG00000037928	ddx42	92	65.763	ENSPCAG00000002474	DDX42	100	63.920	Procavia_capensis
ENSDARG00000037928	ddx42	99	62.004	ENSPCOG00000001559	DDX42	87	75.570	Propithecus_coquereli
ENSDARG00000037928	ddx42	76	79.799	ENSPNYG00000013954	ddx42	97	77.099	Pundamilia_nyererei
ENSDARG00000037928	ddx42	97	83.243	ENSPNAG00000017352	ddx42	100	83.546	Pygocentrus_nattereri
ENSDARG00000037928	ddx42	99	70.903	ENSRNOG00000009474	Ddx42	99	69.358	Rattus_norvegicus
ENSDARG00000037928	ddx42	99	70.886	ENSRBIG00000004781	DDX42	91	83.072	Rhinopithecus_bieti
ENSDARG00000037928	ddx42	99	72.009	ENSSBOG00000029624	DDX42	90	79.552	Saimiri_boliviensis_boliviensis
ENSDARG00000037928	ddx42	99	70.393	ENSSHAG00000012896	-	100	69.853	Sarcophilus_harrisii
ENSDARG00000037928	ddx42	70	47.025	ENSSHAG00000007919	-	99	46.936	Sarcophilus_harrisii
ENSDARG00000037928	ddx42	86	85.260	ENSSFOG00015014064	ddx42	80	87.135	Scleropages_formosus
ENSDARG00000037928	ddx42	100	76.000	ENSSMAG00000009077	ddx42	100	77.662	Scophthalmus_maximus
ENSDARG00000037928	ddx42	100	79.127	ENSSDUG00000022221	ddx42	100	79.402	Seriola_dumerili
ENSDARG00000037928	ddx42	100	78.671	ENSSLDG00000018483	ddx42	100	78.840	Seriola_lalandi_dorsalis
ENSDARG00000037928	ddx42	99	69.561	ENSSARG00000009847	DDX42	100	70.179	Sorex_araneus
ENSDARG00000037928	ddx42	99	72.269	ENSSPUG00000018806	DDX42	99	71.579	Sphenodon_punctatus
ENSDARG00000037928	ddx42	92	82.415	ENSSPAG00000013055	ddx42	100	79.616	Stegastes_partitus
ENSDARG00000037928	ddx42	85	69.613	ENSSSCG00000017289	DDX42	97	67.835	Sus_scrofa
ENSDARG00000037928	ddx42	99	70.137	ENSTGUG00000001931	DDX42	100	68.835	Taeniopygia_guttata
ENSDARG00000037928	ddx42	100	75.649	ENSTRUG00000010711	ddx42	99	84.292	Takifugu_rubripes
ENSDARG00000037928	ddx42	83	76.115	ENSTBEG00000010159	DDX42	99	76.115	Tupaia_belangeri
ENSDARG00000037928	ddx42	100	69.948	ENSTTRG00000006962	DDX42	100	69.516	Tursiops_truncatus
ENSDARG00000037928	ddx42	99	70.459	ENSUAMG00000007321	DDX42	100	70.335	Ursus_americanus
ENSDARG00000037928	ddx42	100	70.471	ENSUMAG00000017438	DDX42	100	70.421	Ursus_maritimus
ENSDARG00000037928	ddx42	99	61.900	ENSVPAG00000009633	DDX42	94	72.258	Vicugna_pacos
ENSDARG00000037928	ddx42	99	70.293	ENSVVUG00000006095	DDX42	100	70.021	Vulpes_vulpes
ENSDARG00000037928	ddx42	100	71.813	ENSXETG00000003245	ddx42	100	70.984	Xenopus_tropicalis
ENSDARG00000037928	ddx42	84	77.905	ENSXCOG00000017560	ddx42	97	77.877	Xiphophorus_couchianus
ENSDARG00000037928	ddx42	100	78.172	ENSXMAG00000008138	ddx42	100	77.957	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function