EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037930 (Gene tree)
Gene ID: 446116
Gene Symbol: rnf113a
Alias: wu:fj91a07|zgc:110007|znf183
Full Name: ring finger protein 113A
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5602 bases
Position: chr3:31919042-31924643
Accession: ZDB-GENE-040825-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000110509	zf-CCCH	PF00642.24	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000155170	-	836	-	-	- (aa)	-	-
ENSDART00000122589	-	1117	-	ENSDARP00000110509	321 (aa)	-	Q6DRF0

Gene Model

Click here to download ENSDARG00000037930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037930	rnf113a	100	69.822	ENSG00000125352	RNF113A	99	70.710	Homo_sapiens
ENSDARG00000037930	rnf113a	94	60.458	ENSG00000139797	RNF113B	94	60.458	Homo_sapiens
ENSDARG00000037930	rnf113a	100	86.025	ENSAPOG00000017510	rnf113a	100	86.025	Acanthochromis_polyacanthus
ENSDARG00000037930	rnf113a	98	70.091	ENSAMEG00000019845	-	95	70.695	Ailuropoda_melanoleuca
ENSDARG00000037930	rnf113a	100	75.389	ENSACIG00000007458	rnf113a	100	75.389	Amphilophus_citrinellus
ENSDARG00000037930	rnf113a	100	86.335	ENSAOCG00000003485	rnf113a	100	86.335	Amphiprion_ocellaris
ENSDARG00000037930	rnf113a	100	86.335	ENSAPEG00000001084	rnf113a	100	86.335	Amphiprion_percula
ENSDARG00000037930	rnf113a	100	87.578	ENSATEG00000022950	rnf113a	100	87.578	Anabas_testudineus
ENSDARG00000037930	rnf113a	76	84.082	ENSAPLG00000012510	-	94	81.641	Anas_platyrhynchos
ENSDARG00000037930	rnf113a	95	71.753	ENSACAG00000012485	-	100	71.924	Anolis_carolinensis
ENSDARG00000037930	rnf113a	97	72.274	ENSANAG00000013925	-	94	72.274	Aotus_nancymaae
ENSDARG00000037930	rnf113a	94	61.111	ENSANAG00000020431	RNF113B	94	61.111	Aotus_nancymaae
ENSDARG00000037930	rnf113a	95	72.871	ENSANAG00000024332	-	95	72.871	Aotus_nancymaae
ENSDARG00000037930	rnf113a	100	82.609	ENSACLG00000025256	rnf113a	100	82.609	Astatotilapia_calliptera
ENSDARG00000037930	rnf113a	100	88.509	ENSAMXG00000011273	rnf113a	100	88.509	Astyanax_mexicanus
ENSDARG00000037930	rnf113a	98	65.465	ENSBTAG00000008684	-	95	66.366	Bos_taurus
ENSDARG00000037930	rnf113a	97	69.753	ENSBTAG00000006034	RNF113A	94	71.914	Bos_taurus
ENSDARG00000037930	rnf113a	91	47.492	WBGene00010476	rnf-113	76	47.333	Caenorhabditis_elegans
ENSDARG00000037930	rnf113a	94	62.745	ENSCJAG00000004501	RNF113B	94	62.745	Callithrix_jacchus
ENSDARG00000037930	rnf113a	97	71.517	ENSCJAG00000022327	RNF113A	94	71.517	Callithrix_jacchus
ENSDARG00000037930	rnf113a	98	70.000	ENSCAFG00000018430	-	95	70.303	Canis_familiaris
ENSDARG00000037930	rnf113a	98	62.349	ENSCAFG00000018373	-	95	62.349	Canis_familiaris
ENSDARG00000037930	rnf113a	98	70.000	ENSCAFG00020004044	-	95	70.303	Canis_lupus_dingo
ENSDARG00000037930	rnf113a	98	62.651	ENSCAFG00020020280	-	95	62.651	Canis_lupus_dingo
ENSDARG00000037930	rnf113a	98	68.012	ENSCHIG00000015616	-	95	68.323	Capra_hircus
ENSDARG00000037930	rnf113a	97	69.444	ENSCHIG00000018820	-	94	71.605	Capra_hircus
ENSDARG00000037930	rnf113a	94	72.347	ENSTSYG00000001308	RNF113A	90	73.633	Carlito_syrichta
ENSDARG00000037930	rnf113a	99	71.037	ENSCPOG00000038517	-	98	71.037	Cavia_porcellus
ENSDARG00000037930	rnf113a	94	63.399	ENSCCAG00000021327	RNF113B	94	63.399	Cebus_capucinus
ENSDARG00000037930	rnf113a	97	71.692	ENSCCAG00000013617	RNF113A	95	71.692	Cebus_capucinus
ENSDARG00000037930	rnf113a	100	69.912	ENSCATG00000002702	RNF113A	99	70.796	Cercocebus_atys
ENSDARG00000037930	rnf113a	97	72.171	ENSCLAG00000017479	-	95	72.171	Chinchilla_lanigera
ENSDARG00000037930	rnf113a	100	61.976	ENSCSAG00000019472	-	99	61.976	Chlorocebus_sabaeus
ENSDARG00000037930	rnf113a	94	61.111	ENSCSAG00000000222	RNF113B	90	61.111	Chlorocebus_sabaeus
ENSDARG00000037930	rnf113a	80	69.925	ENSCHOG00000008711	-	100	71.053	Choloepus_hoffmanni
ENSDARG00000037930	rnf113a	97	75.316	ENSCPBG00000026980	-	98	75.000	Chrysemys_picta_bellii
ENSDARG00000037930	rnf113a	81	70.833	ENSCING00000009197	-	95	65.161	Ciona_intestinalis
ENSDARG00000037930	rnf113a	81	71.756	ENSCSAVG00000006210	-	90	68.041	Ciona_savignyi
ENSDARG00000037930	rnf113a	95	61.039	ENSCANG00000041552	RNF113B	95	61.039	Colobus_angolensis_palliatus
ENSDARG00000037930	rnf113a	100	70.118	ENSCANG00000037715	RNF113A	99	71.006	Colobus_angolensis_palliatus
ENSDARG00000037930	rnf113a	97	70.625	ENSCGRG00001002251	Rnf113a1	94	71.562	Cricetulus_griseus_chok1gshd
ENSDARG00000037930	rnf113a	97	70.625	ENSCGRG00000016675	Rnf113a2	95	70.625	Cricetulus_griseus_crigri
ENSDARG00000037930	rnf113a	97	70.312	ENSCGRG00000019441	Rnf113a1	94	71.250	Cricetulus_griseus_crigri
ENSDARG00000037930	rnf113a	100	86.957	ENSCSEG00000021570	rnf113a	86	86.957	Cynoglossus_semilaevis
ENSDARG00000037930	rnf113a	100	83.540	ENSCVAG00000011305	rnf113a	100	83.540	Cyprinodon_variegatus
ENSDARG00000037930	rnf113a	97	70.279	ENSDORG00000027624	Rnf113a2	96	69.969	Dipodomys_ordii
ENSDARG00000037930	rnf113a	92	58.333	FBgn0038772	mdlc	93	56.456	Drosophila_melanogaster
ENSDARG00000037930	rnf113a	100	70.783	ENSETEG00000018346	-	97	71.687	Echinops_telfairi
ENSDARG00000037930	rnf113a	96	72.403	ENSEBUG00000016079	rnf113a	94	71.753	Eptatretus_burgeri
ENSDARG00000037930	rnf113a	98	68.308	ENSEASG00005010538	-	95	69.538	Equus_asinus_asinus
ENSDARG00000037930	rnf113a	96	69.592	ENSECAG00000004638	-	99	69.906	Equus_caballus
ENSDARG00000037930	rnf113a	98	71.779	ENSECAG00000003934	-	95	72.086	Equus_caballus
ENSDARG00000037930	rnf113a	100	85.093	ENSELUG00000020657	rnf113a	100	85.093	Esox_lucius
ENSDARG00000037930	rnf113a	98	69.113	ENSFCAG00000028962	-	95	69.725	Felis_catus
ENSDARG00000037930	rnf113a	97	71.914	ENSFCAG00000025700	-	94	72.222	Felis_catus
ENSDARG00000037930	rnf113a	97	71.605	ENSFCAG00000024392	-	92	71.914	Felis_catus
ENSDARG00000037930	rnf113a	86	78.417	ENSFALG00000004633	-	95	76.471	Ficedula_albicollis
ENSDARG00000037930	rnf113a	100	87.267	ENSFHEG00000023305	rnf113a	100	87.267	Fundulus_heteroclitus
ENSDARG00000037930	rnf113a	98	82.099	ENSGMOG00000004541	rnf113a	98	81.481	Gadus_morhua
ENSDARG00000037930	rnf113a	93	75.329	ENSGALG00000000538	RNF113A	94	74.351	Gallus_gallus
ENSDARG00000037930	rnf113a	100	85.139	ENSGAFG00000011863	rnf113a	99	85.139	Gambusia_affinis
ENSDARG00000037930	rnf113a	99	84.049	ENSGACG00000009738	rnf113a	99	84.049	Gasterosteus_aculeatus
ENSDARG00000037930	rnf113a	97	75.316	ENSGAGG00000020490	-	98	74.367	Gopherus_agassizii
ENSDARG00000037930	rnf113a	100	69.822	ENSGGOG00000002324	RNF113A	99	70.710	Gorilla_gorilla
ENSDARG00000037930	rnf113a	94	60.784	ENSGGOG00000023052	RNF113B	94	60.784	Gorilla_gorilla
ENSDARG00000037930	rnf113a	100	82.919	ENSHBUG00000008626	rnf113a	100	82.919	Haplochromis_burtoni
ENSDARG00000037930	rnf113a	97	71.963	ENSHGLG00000019571	-	94	71.963	Heterocephalus_glaber_female
ENSDARG00000037930	rnf113a	97	70.031	ENSHGLG00100019582	-	94	70.642	Heterocephalus_glaber_male
ENSDARG00000037930	rnf113a	100	83.540	ENSHCOG00000003421	rnf113a	99	83.540	Hippocampus_comes
ENSDARG00000037930	rnf113a	100	88.820	ENSIPUG00000013431	RNF113A	100	88.820	Ictalurus_punctatus
ENSDARG00000037930	rnf113a	97	71.914	ENSSTOG00000019866	-	94	71.914	Ictidomys_tridecemlineatus
ENSDARG00000037930	rnf113a	73	57.021	ENSJJAG00000019849	Rnf113a1	71	63.235	Jaculus_jaculus
ENSDARG00000037930	rnf113a	100	86.335	ENSKMAG00000009830	rnf113a	100	86.646	Kryptolebias_marmoratus
ENSDARG00000037930	rnf113a	100	88.820	ENSLBEG00000004627	rnf113a	100	88.820	Labrus_bergylta
ENSDARG00000037930	rnf113a	100	78.638	ENSLACG00000013178	rnf113a	99	78.019	Latimeria_chalumnae
ENSDARG00000037930	rnf113a	97	83.601	ENSLOCG00000011785	rnf113a	96	83.601	Lepisosteus_oculatus
ENSDARG00000037930	rnf113a	97	70.807	ENSLAFG00000013906	-	94	70.186	Loxodonta_africana
ENSDARG00000037930	rnf113a	100	69.912	ENSMFAG00000018472	RNF113A	99	70.796	Macaca_fascicularis
ENSDARG00000037930	rnf113a	100	69.912	ENSMMUG00000020223	RNF113A	99	70.796	Macaca_mulatta
ENSDARG00000037930	rnf113a	100	69.912	ENSMNEG00000019778	RNF113A	99	70.796	Macaca_nemestrina
ENSDARG00000037930	rnf113a	100	69.912	ENSMLEG00000020750	RNF113A	99	70.796	Mandrillus_leucophaeus
ENSDARG00000037930	rnf113a	74	69.068	ENSMLEG00000038757	RNF113B	77	69.869	Mandrillus_leucophaeus
ENSDARG00000037930	rnf113a	100	86.646	ENSMAMG00000021895	rnf113a	100	86.646	Mastacembelus_armatus
ENSDARG00000037930	rnf113a	100	82.609	ENSMZEG00005023086	rnf113a	100	82.609	Maylandia_zebra
ENSDARG00000037930	rnf113a	85	80.435	ENSMGAG00000001753	-	95	79.286	Meleagris_gallopavo
ENSDARG00000037930	rnf113a	97	72.000	ENSMICG00000001750	-	94	72.000	Microcebus_murinus
ENSDARG00000037930	rnf113a	99	67.868	ENSMICG00000038084	-	97	68.468	Microcebus_murinus
ENSDARG00000037930	rnf113a	97	70.000	ENSMOCG00000005370	-	91	70.625	Microtus_ochrogaster
ENSDARG00000037930	rnf113a	99	84.424	ENSMMOG00000016954	rnf113a	100	84.424	Mola_mola
ENSDARG00000037930	rnf113a	100	79.814	ENSMALG00000007938	rnf113a	100	79.814	Monopterus_albus
ENSDARG00000037930	rnf113a	97	72.188	MGP_CAROLIEiJ_G0017943	Rnf113a2	95	72.188	Mus_caroli
ENSDARG00000037930	rnf113a	97	72.188	ENSMUSG00000098134	Rnf113a2	95	72.188	Mus_musculus
ENSDARG00000037930	rnf113a	97	70.312	ENSMUSG00000036537	Rnf113a1	94	71.562	Mus_musculus
ENSDARG00000037930	rnf113a	97	71.875	MGP_PahariEiJ_G0029702	Rnf113a2	95	71.875	Mus_pahari
ENSDARG00000037930	rnf113a	97	71.250	MGP_PahariEiJ_G0031547	Rnf113a1	94	71.562	Mus_pahari
ENSDARG00000037930	rnf113a	97	70.312	MGP_SPRETEiJ_G0034156	Rnf113a1	94	71.562	Mus_spretus
ENSDARG00000037930	rnf113a	97	72.188	MGP_SPRETEiJ_G0018788	Rnf113a2	95	72.188	Mus_spretus
ENSDARG00000037930	rnf113a	98	71.125	ENSMPUG00000019358	-	95	70.517	Mustela_putorius_furo
ENSDARG00000037930	rnf113a	98	68.902	ENSMLUG00000010856	-	95	68.293	Myotis_lucifugus
ENSDARG00000037930	rnf113a	98	69.091	ENSMLUG00000016812	-	95	69.697	Myotis_lucifugus
ENSDARG00000037930	rnf113a	100	83.540	ENSNBRG00000004314	rnf113a	100	83.540	Neolamprologus_brichardi
ENSDARG00000037930	rnf113a	100	69.822	ENSNLEG00000018333	RNF113A	99	70.710	Nomascus_leucogenys
ENSDARG00000037930	rnf113a	94	60.784	ENSNLEG00000007844	RNF113B	94	61.438	Nomascus_leucogenys
ENSDARG00000037930	rnf113a	96	70.497	ENSMEUG00000001855	-	96	70.807	Notamacropus_eugenii
ENSDARG00000037930	rnf113a	100	82.919	ENSONIG00000000741	rnf113a	100	82.919	Oreochromis_niloticus
ENSDARG00000037930	rnf113a	97	71.019	ENSOANG00000002592	-	93	71.019	Ornithorhynchus_anatinus
ENSDARG00000037930	rnf113a	98	69.725	ENSOCUG00000016207	-	95	71.560	Oryctolagus_cuniculus
ENSDARG00000037930	rnf113a	99	84.424	ENSORLG00000002442	rnf113a	100	84.424	Oryzias_latipes
ENSDARG00000037930	rnf113a	99	84.112	ENSORLG00020011512	rnf113a	100	84.112	Oryzias_latipes_hni
ENSDARG00000037930	rnf113a	99	84.424	ENSORLG00015004382	rnf113a	100	84.424	Oryzias_latipes_hsok
ENSDARG00000037930	rnf113a	99	85.093	ENSOMEG00000020197	rnf113a	100	85.093	Oryzias_melastigma
ENSDARG00000037930	rnf113a	94	72.403	ENSOGAG00000011638	RNF113B	90	72.403	Otolemur_garnettii
ENSDARG00000037930	rnf113a	97	71.605	ENSOGAG00000031602	RNF113A	94	71.605	Otolemur_garnettii
ENSDARG00000037930	rnf113a	97	69.444	ENSOARG00000009771	-	94	71.605	Ovis_aries
ENSDARG00000037930	rnf113a	98	65.653	ENSOARG00000015294	-	95	66.565	Ovis_aries
ENSDARG00000037930	rnf113a	97	71.517	ENSPPAG00000009537	RNF113A	94	72.446	Pan_paniscus
ENSDARG00000037930	rnf113a	94	61.111	ENSPPAG00000040641	RNF113B	94	61.111	Pan_paniscus
ENSDARG00000037930	rnf113a	97	69.846	ENSPPRG00000020640	-	94	70.462	Panthera_pardus
ENSDARG00000037930	rnf113a	97	71.914	ENSPPRG00000011512	-	94	72.222	Panthera_pardus
ENSDARG00000037930	rnf113a	97	71.914	ENSPTIG00000007986	-	94	72.222	Panthera_tigris_altaica
ENSDARG00000037930	rnf113a	94	61.111	ENSPTRG00000005987	RNF113B	94	61.111	Pan_troglodytes
ENSDARG00000037930	rnf113a	97	71.517	ENSPTRG00000022231	RNF113A	94	72.446	Pan_troglodytes
ENSDARG00000037930	rnf113a	100	69.912	ENSPANG00000011522	RNF113A	99	70.796	Papio_anubis
ENSDARG00000037930	rnf113a	100	87.578	ENSPKIG00000016796	rnf113a	100	87.578	Paramormyrops_kingsleyae
ENSDARG00000037930	rnf113a	88	80.139	ENSPSIG00000012676	-	98	79.791	Pelodiscus_sinensis
ENSDARG00000037930	rnf113a	100	83.951	ENSPMGG00000009668	rnf113a	100	83.951	Periophthalmus_magnuspinnatus
ENSDARG00000037930	rnf113a	97	70.093	ENSPEMG00000002490	Rnf113a1	94	71.651	Peromyscus_maniculatus_bairdii
ENSDARG00000037930	rnf113a	84	79.336	ENSPMAG00000005184	rnf113a	92	78.598	Petromyzon_marinus
ENSDARG00000037930	rnf113a	95	71.605	ENSPCIG00000028916	-	92	71.914	Phascolarctos_cinereus
ENSDARG00000037930	rnf113a	100	83.591	ENSPFOG00000014248	rnf113a	100	84.830	Poecilia_formosa
ENSDARG00000037930	rnf113a	100	83.282	ENSPLAG00000010435	rnf113a	100	84.520	Poecilia_latipinna
ENSDARG00000037930	rnf113a	100	85.449	ENSPMEG00000010641	rnf113a	100	85.449	Poecilia_mexicana
ENSDARG00000037930	rnf113a	100	85.759	ENSPREG00000009900	rnf113a	99	85.759	Poecilia_reticulata
ENSDARG00000037930	rnf113a	94	62.418	ENSPPYG00000005460	RNF113B	95	62.418	Pongo_abelii
ENSDARG00000037930	rnf113a	100	69.822	ENSPPYG00000020676	RNF113A	99	70.710	Pongo_abelii
ENSDARG00000037930	rnf113a	97	70.405	ENSPCAG00000014633	-	94	70.405	Procavia_capensis
ENSDARG00000037930	rnf113a	97	68.923	ENSPCOG00000005671	-	93	68.923	Propithecus_coquereli
ENSDARG00000037930	rnf113a	100	82.609	ENSPNYG00000013863	rnf113a	100	82.609	Pundamilia_nyererei
ENSDARG00000037930	rnf113a	100	89.130	ENSPNAG00000017428	rnf113a	100	89.130	Pygocentrus_nattereri
ENSDARG00000037930	rnf113a	97	71.250	ENSRNOG00000034040	LOC108348079	94	71.562	Rattus_norvegicus
ENSDARG00000037930	rnf113a	97	71.250	ENSRNOG00000059412	Rnf113a1	94	71.562	Rattus_norvegicus
ENSDARG00000037930	rnf113a	95	61.039	ENSRBIG00000036094	RNF113B	94	61.364	Rhinopithecus_bieti
ENSDARG00000037930	rnf113a	100	70.118	ENSRBIG00000017389	RNF113A	99	71.006	Rhinopithecus_bieti
ENSDARG00000037930	rnf113a	95	60.714	ENSRROG00000045661	RNF113B	94	61.039	Rhinopithecus_roxellana
ENSDARG00000037930	rnf113a	100	70.118	ENSRROG00000012149	RNF113A	99	71.006	Rhinopithecus_roxellana
ENSDARG00000037930	rnf113a	100	70.118	ENSSBOG00000017704	RNF113A	99	70.118	Saimiri_boliviensis_boliviensis
ENSDARG00000037930	rnf113a	94	61.184	ENSSBOG00000029719	RNF113B	94	61.889	Saimiri_boliviensis_boliviensis
ENSDARG00000037930	rnf113a	96	70.769	ENSSHAG00000008839	-	92	70.462	Sarcophilus_harrisii
ENSDARG00000037930	rnf113a	99	85.000	ENSSFOG00015016567	rnf113a	98	85.000	Scleropages_formosus
ENSDARG00000037930	rnf113a	100	83.851	ENSSMAG00000009235	rnf113a	100	83.851	Scophthalmus_maximus
ENSDARG00000037930	rnf113a	100	87.888	ENSSDUG00000022244	rnf113a	100	87.888	Seriola_dumerili
ENSDARG00000037930	rnf113a	100	87.888	ENSSLDG00000018582	rnf113a	100	87.888	Seriola_lalandi_dorsalis
ENSDARG00000037930	rnf113a	98	72.590	ENSSARG00000010436	-	97	72.590	Sorex_araneus
ENSDARG00000037930	rnf113a	95	76.129	ENSSPUG00000018786	-	86	75.806	Sphenodon_punctatus
ENSDARG00000037930	rnf113a	100	87.267	ENSSPAG00000013187	rnf113a	100	87.267	Stegastes_partitus
ENSDARG00000037930	rnf113a	98	67.485	ENSSSCG00000032973	-	95	69.939	Sus_scrofa
ENSDARG00000037930	rnf113a	93	76.393	ENSTGUG00000001947	-	98	74.528	Taeniopygia_guttata
ENSDARG00000037930	rnf113a	100	81.677	ENSTRUG00000011142	rnf113a	100	81.988	Takifugu_rubripes
ENSDARG00000037930	rnf113a	100	81.734	ENSTNIG00000014938	rnf113a	100	81.734	Tetraodon_nigroviridis
ENSDARG00000037930	rnf113a	94	72.026	ENSTBEG00000012687	-	91	72.990	Tupaia_belangeri
ENSDARG00000037930	rnf113a	98	69.512	ENSUAMG00000024564	-	96	70.122	Ursus_americanus
ENSDARG00000037930	rnf113a	94	71.154	ENSUMAG00000002167	-	94	71.795	Ursus_maritimus
ENSDARG00000037930	rnf113a	89	70.548	ENSVPAG00000004521	-	93	69.521	Vicugna_pacos
ENSDARG00000037930	rnf113a	71	59.259	ENSVVUG00000004522	-	82	60.082	Vulpes_vulpes
ENSDARG00000037930	rnf113a	98	70.303	ENSVVUG00000011662	-	95	70.606	Vulpes_vulpes
ENSDARG00000037930	rnf113a	97	74.522	ENSXETG00000002042	rnf113a	97	75.478	Xenopus_tropicalis
ENSDARG00000037930	rnf113a	93	86.000	ENSXCOG00000017542	rnf113a	96	86.000	Xiphophorus_couchianus
ENSDARG00000037930	rnf113a	100	85.449	ENSXMAG00000008169	rnf113a	100	85.449	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005684	U2-type spliceosomal complex	21873635.	IBA	Component
GO:0034247	snoRNA splicing	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function