EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000037967 (Gene tree)
Gene ID: 100003902
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: si:dkey-16l2.16
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7455 bases
Position: chr3:32661765-32669219
Accession: ZDB-GENE-141219-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000156271	MMR_HSR1	PF01926.23	4e-07	1	1
ENSDARP00000136434	MMR_HSR1	PF01926.23	7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000165562	-	2061	XM_021474295	ENSDARP00000136434	209 (aa)	XP_021329970	E7EY00
ENSDART00000171556	-	915	-	-	- (aa)	-	-
ENSDART00000190240	-	360	-	ENSDARP00000156271	119 (aa)	-	A0A2R8QDE6

Gene Model

Click here to download ENSDARG00000037967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000037967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000037967	si:dkey-16l2.16	89	55.660	ENSDARG00000114797	rab3b	74	50.000
ENSDARG00000037967	si:dkey-16l2.16	95	36.000	ENSDARG00000029885	rab41	73	40.909
ENSDARG00000037967	si:dkey-16l2.16	90	35.417	ENSDARG00000010977	rab34b	80	35.468
ENSDARG00000037967	si:dkey-16l2.16	86	52.427	ENSDARG00000003257	zgc:101559	78	45.304
ENSDARG00000037967	si:dkey-16l2.16	84	30.000	ENSDARG00000099918	arl4aa	57	30.088
ENSDARG00000037967	si:dkey-16l2.16	77	31.683	ENSDARG00000057857	arfrp1	52	32.323
ENSDARG00000037967	si:dkey-16l2.16	82	43.878	ENSDARG00000020497	rab7a	81	38.462
ENSDARG00000037967	si:dkey-16l2.16	92	35.135	ENSDARG00000013161	zgc:55558	90	37.427
ENSDARG00000037967	si:dkey-16l2.16	92	51.376	ENSDARG00000041450	rab11a	81	45.977
ENSDARG00000037967	si:dkey-16l2.16	90	34.545	ENSDARG00000036252	rras2	83	30.357
ENSDARG00000037967	si:dkey-16l2.16	81	39.175	ENSDARG00000100379	si:dkey-34d22.2	91	34.706
ENSDARG00000037967	si:dkey-16l2.16	82	31.633	ENSDARG00000006553	rras	84	31.765
ENSDARG00000037967	si:dkey-16l2.16	95	48.696	ENSDARG00000014340	rab11al	83	43.889
ENSDARG00000037967	si:dkey-16l2.16	82	43.878	ENSDARG00000034522	rab6ba	74	38.961
ENSDARG00000037967	si:dkey-16l2.16	96	35.749	ENSDARG00000045027	rab9a	97	35.266
ENSDARG00000037967	si:dkey-16l2.16	82	45.455	ENSDARG00000102580	CU571310.1	76	37.267
ENSDARG00000037967	si:dkey-16l2.16	81	30.168	ENSDARG00000015611	rasl11b	72	30.168
ENSDARG00000037967	si:dkey-16l2.16	99	51.261	ENSDARG00000018107	rab3da	86	48.966
ENSDARG00000037967	si:dkey-16l2.16	92	55.046	ENSDARG00000034771	rab13	85	49.112
ENSDARG00000037967	si:dkey-16l2.16	95	37.255	ENSDARG00000026098	si:dkey-13a21.4	96	36.275
ENSDARG00000037967	si:dkey-16l2.16	96	68.696	ENSDARG00000058044	rab1ba	99	53.202
ENSDARG00000037967	si:dkey-16l2.16	91	30.556	ENSDARG00000035719	arl5c	56	30.556
ENSDARG00000037967	si:dkey-16l2.16	82	43.878	ENSDARG00000031343	rab6bb	74	38.961
ENSDARG00000037967	si:dkey-16l2.16	92	52.727	ENSDARG00000037884	rab30	87	48.851
ENSDARG00000037967	si:dkey-16l2.16	84	34.000	ENSDARG00000010844	kras	88	32.738
ENSDARG00000037967	si:dkey-16l2.16	78	30.851	ENSDARG00000014763	arf2a	74	30.851
ENSDARG00000037967	si:dkey-16l2.16	97	86.207	ENSDARG00000058425	rab35b	99	70.048
ENSDARG00000037967	si:dkey-16l2.16	82	54.545	ENSDARG00000057394	rab33a	72	45.930
ENSDARG00000037967	si:dkey-16l2.16	90	42.991	ENSDARG00000103391	rab9b	87	35.393
ENSDARG00000037967	si:dkey-16l2.16	97	52.991	ENSDARG00000026484	rab15	82	48.276
ENSDARG00000037967	si:dkey-16l2.16	82	31.000	ENSDARG00000069496	arl2	51	31.000
ENSDARG00000037967	si:dkey-16l2.16	83	34.343	ENSDARG00000063321	rabl2	74	31.325
ENSDARG00000037967	si:dkey-16l2.16	96	71.304	ENSDARG00000033056	zgc:171927	79	64.458
ENSDARG00000037967	si:dkey-16l2.16	96	50.000	ENSDARG00000041878	rab11ba	81	44.910
ENSDARG00000037967	si:dkey-16l2.16	93	55.856	ENSDARG00000103934	megf8	98	47.929
ENSDARG00000037967	si:dkey-16l2.16	86	33.010	ENSDARG00000045074	arl4d	59	33.051
ENSDARG00000037967	si:dkey-16l2.16	82	45.918	ENSDARG00000021287	rab7b	82	39.645
ENSDARG00000037967	si:dkey-16l2.16	90	49.533	ENSDARG00000058800	rab25a	96	40.488
ENSDARG00000037967	si:dkey-16l2.16	88	46.667	ENSDARG00000035188	rab14l	76	42.331
ENSDARG00000037967	si:dkey-16l2.16	96	39.303	ENSDARG00000007257	rab5ab	78	42.262
ENSDARG00000037967	si:dkey-16l2.16	96	49.138	ENSDARG00000020261	rab2a	75	46.541
ENSDARG00000037967	si:dkey-16l2.16	95	51.304	ENSDARG00000090086	rab11bb	83	45.556
ENSDARG00000037967	si:dkey-16l2.16	91	43.519	ENSDARG00000045628	rab34a	79	33.981
ENSDARG00000037967	si:dkey-16l2.16	82	44.898	ENSDARG00000087243	zgc:100918	85	36.932
ENSDARG00000037967	si:dkey-16l2.16	88	47.619	ENSDARG00000074246	rab14	76	42.945
ENSDARG00000037967	si:dkey-16l2.16	82	30.612	ENSDARG00000111106	arl3l1	50	30.612
ENSDARG00000037967	si:dkey-16l2.16	90	49.533	ENSDARG00000052954	rab25b	75	47.468
ENSDARG00000037967	si:dkey-16l2.16	96	69.565	ENSDARG00000052263	rab1aa	80	63.750
ENSDARG00000037967	si:dkey-16l2.16	92	33.333	ENSDARG00000098497	hrasa	87	34.940
ENSDARG00000037967	si:dkey-16l2.16	78	30.851	ENSDARG00000016393	arf2b	60	30.851
ENSDARG00000037967	si:dkey-16l2.16	83	35.354	ENSDARG00000070916	dnajc27	59	33.540
ENSDARG00000037967	si:dkey-16l2.16	79	40.426	ENSDARG00000075285	si:ch73-116o1.2	91	31.414
ENSDARG00000037967	si:dkey-16l2.16	85	48.515	ENSDARG00000099205	CABZ01081908.1	88	48.515
ENSDARG00000037967	si:dkey-16l2.16	86	60.784	ENSDARG00000098344	rab18b	85	46.023
ENSDARG00000037967	si:dkey-16l2.16	86	46.078	ENSDARG00000018602	rab5aa	78	42.857
ENSDARG00000037967	si:dkey-16l2.16	85	46.535	ENSDARG00000015807	rab22a	82	40.373
ENSDARG00000037967	si:dkey-16l2.16	80	40.000	ENSDARG00000062865	mras	83	31.646
ENSDARG00000037967	si:dkey-16l2.16	82	31.959	ENSDARG00000056794	zgc:110197	61	30.172
ENSDARG00000037967	si:dkey-16l2.16	96	66.957	ENSDARG00000056479	rab1bb	87	57.714
ENSDARG00000037967	si:dkey-16l2.16	82	57.143	ENSDARG00000036501	rab39bb	97	40.580
ENSDARG00000037967	si:dkey-16l2.16	95	35.500	ENSDARG00000103714	rab6a	74	40.260
ENSDARG00000037967	si:dkey-16l2.16	82	57.143	ENSDARG00000019312	rab39ba	77	46.951
ENSDARG00000037967	si:dkey-16l2.16	88	49.524	ENSDARG00000089428	rab12	71	44.643
ENSDARG00000037967	si:dkey-16l2.16	96	69.565	ENSDARG00000029663	rab1ab	80	64.375
ENSDARG00000037967	si:dkey-16l2.16	92	34.234	ENSDARG00000038225	nras	81	36.774
ENSDARG00000037967	si:dkey-16l2.16	86	58.824	ENSDARG00000055291	rab18a	80	45.732
ENSDARG00000037967	si:dkey-16l2.16	97	42.241	ENSDARG00000014058	rab36	69	36.872
ENSDARG00000037967	si:dkey-16l2.16	97	86.207	ENSDARG00000102078	CABZ01072548.1	85	78.313
ENSDARG00000037967	si:dkey-16l2.16	88	49.057	ENSDARG00000034215	rab42a	82	41.714
ENSDARG00000037967	si:dkey-16l2.16	82	38.144	ENSDARG00000004151	rab23	80	31.980
ENSDARG00000037967	si:dkey-16l2.16	92	33.333	ENSDARG00000005651	hrasb	98	35.664
ENSDARG00000037967	si:dkey-16l2.16	86	51.456	ENSDARG00000052290	rab33ba	72	44.509
ENSDARG00000037967	si:dkey-16l2.16	78	31.373	ENSDARG00000040959	rabl3	88	30.000
ENSDARG00000037967	si:dkey-16l2.16	82	30.928	ENSDARG00000071409	arl3	51	30.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000037967	si:dkey-16l2.16	99	97.458	ENSAPOG00000008263	si:dkey-16l2.16	100	92.823	Acanthochromis_polyacanthus
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSAOCG00000016825	si:dkey-16l2.16	100	93.301	Amphiprion_ocellaris
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSAPEG00000006500	si:dkey-16l2.16	100	93.301	Amphiprion_percula
ENSDARG00000037967	si:dkey-16l2.16	99	97.458	ENSATEG00000019238	si:dkey-16l2.16	100	92.344	Anabas_testudineus
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSACLG00000018721	si:dkey-16l2.16	100	92.823	Astatotilapia_calliptera
ENSDARG00000037967	si:dkey-16l2.16	100	97.479	ENSAMXG00000038243	si:dkey-16l2.16	100	96.172	Astyanax_mexicanus
ENSDARG00000037967	si:dkey-16l2.16	100	97.479	ENSCSEG00000009988	si:dkey-16l2.16	91	97.479	Cynoglossus_semilaevis
ENSDARG00000037967	si:dkey-16l2.16	99	95.763	ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	Cyprinodon_variegatus
ENSDARG00000037967	si:dkey-16l2.16	98	95.726	ENSELUG00000023247	si:dkey-16l2.16	99	86.538	Esox_lucius
ENSDARG00000037967	si:dkey-16l2.16	100	94.118	ENSFHEG00000000767	si:dkey-16l2.16	78	92.562	Fundulus_heteroclitus
ENSDARG00000037967	si:dkey-16l2.16	99	95.798	ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	Gadus_morhua
ENSDARG00000037967	si:dkey-16l2.16	99	94.915	ENSGAFG00000005388	si:dkey-16l2.16	100	85.646	Gambusia_affinis
ENSDARG00000037967	si:dkey-16l2.16	99	97.458	ENSGACG00000014915	si:dkey-16l2.16	98	92.344	Gasterosteus_aculeatus
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSHBUG00000019261	si:dkey-16l2.16	100	93.301	Haplochromis_burtoni
ENSDARG00000037967	si:dkey-16l2.16	99	94.915	ENSHCOG00000006538	si:dkey-16l2.16	100	91.866	Hippocampus_comes
ENSDARG00000037967	si:dkey-16l2.16	100	93.277	ENSKMAG00000003494	si:dkey-16l2.16	100	89.474	Kryptolebias_marmoratus
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSLBEG00000007681	si:dkey-16l2.16	100	93.301	Labrus_bergylta
ENSDARG00000037967	si:dkey-16l2.16	99	97.458	ENSMAMG00000019230	si:dkey-16l2.16	100	92.344	Mastacembelus_armatus
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSMZEG00005002081	si:dkey-16l2.16	100	92.823	Maylandia_zebra
ENSDARG00000037967	si:dkey-16l2.16	97	97.391	ENSMMOG00000020140	si:dkey-16l2.16	97	92.233	Mola_mola
ENSDARG00000037967	si:dkey-16l2.16	99	94.915	ENSMALG00000014727	si:dkey-16l2.16	99	91.388	Monopterus_albus
ENSDARG00000037967	si:dkey-16l2.16	99	97.458	ENSNBRG00000008930	si:dkey-16l2.16	100	92.344	Neolamprologus_brichardi
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSONIG00000009443	si:dkey-16l2.16	100	92.823	Oreochromis_niloticus
ENSDARG00000037967	si:dkey-16l2.16	99	94.068	ENSORLG00000001098	si:dkey-16l2.16	99	84.211	Oryzias_latipes
ENSDARG00000037967	si:dkey-16l2.16	99	94.068	ENSORLG00020000867	si:dkey-16l2.16	99	84.211	Oryzias_latipes_hni
ENSDARG00000037967	si:dkey-16l2.16	99	94.915	ENSOMEG00000015474	si:dkey-16l2.16	100	84.689	Oryzias_melastigma
ENSDARG00000037967	si:dkey-16l2.16	99	92.373	ENSPKIG00000018888	si:dkey-16l2.16	100	82.297	Paramormyrops_kingsleyae
ENSDARG00000037967	si:dkey-16l2.16	99	94.915	ENSPKIG00000005686	-	100	91.388	Paramormyrops_kingsleyae
ENSDARG00000037967	si:dkey-16l2.16	99	96.610	ENSPMGG00000000751	si:dkey-16l2.16	100	90.909	Periophthalmus_magnuspinnatus
ENSDARG00000037967	si:dkey-16l2.16	99	95.763	ENSPFOG00000004746	si:dkey-16l2.16	100	86.603	Poecilia_formosa
ENSDARG00000037967	si:dkey-16l2.16	99	95.763	ENSPLAG00000021043	si:dkey-16l2.16	100	86.124	Poecilia_latipinna
ENSDARG00000037967	si:dkey-16l2.16	99	95.763	ENSPMEG00000007165	si:dkey-16l2.16	100	86.603	Poecilia_mexicana
ENSDARG00000037967	si:dkey-16l2.16	99	95.763	ENSPREG00000005323	si:dkey-16l2.16	100	86.124	Poecilia_reticulata
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSPNYG00000009490	si:dkey-16l2.16	100	93.301	Pundamilia_nyererei
ENSDARG00000037967	si:dkey-16l2.16	99	99.153	ENSPNAG00000018986	si:dkey-16l2.16	100	96.651	Pygocentrus_nattereri
ENSDARG00000037967	si:dkey-16l2.16	99	89.831	ENSSFOG00015006414	-	99	80.288	Scleropages_formosus
ENSDARG00000037967	si:dkey-16l2.16	99	96.610	ENSSFOG00015021448	-	100	93.301	Scleropages_formosus
ENSDARG00000037967	si:dkey-16l2.16	96	95.614	ENSSMAG00000011769	si:dkey-16l2.16	94	88.038	Scophthalmus_maximus
ENSDARG00000037967	si:dkey-16l2.16	99	96.610	ENSSDUG00000005719	si:dkey-16l2.16	100	92.344	Seriola_dumerili
ENSDARG00000037967	si:dkey-16l2.16	99	96.610	ENSSLDG00000003631	si:dkey-16l2.16	100	92.344	Seriola_lalandi_dorsalis
ENSDARG00000037967	si:dkey-16l2.16	99	98.305	ENSSPAG00000006302	si:dkey-16l2.16	100	92.823	Stegastes_partitus
ENSDARG00000037967	si:dkey-16l2.16	99	96.610	ENSTRUG00000025076	si:dkey-16l2.16	100	91.388	Takifugu_rubripes
ENSDARG00000037967	si:dkey-16l2.16	99	96.610	ENSTNIG00000011300	si:dkey-16l2.16	100	92.344	Tetraodon_nigroviridis
ENSDARG00000037967	si:dkey-16l2.16	99	94.915	ENSXMAG00000021767	si:dkey-16l2.16	100	86.124	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function