EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000038222 (Gene tree)
Gene ID: 436884
Gene Symbol: tyw3
Alias: zgc:92277
Full Name: tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6907 bases
Position: chr2:11119315-11126221
Accession: ZDB-GENE-040718-355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000055736	TYW3	PF02676.14	3.2e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000055737	-	1488	XM_005171159	ENSDARP00000055736	251 (aa)	XP_005171216	Q6DHJ1

Gene Model

Click here to download ENSDARG00000038222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000038222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000038222	tyw3	86	58.636	ENSG00000162623	TYW3	100	69.643	Homo_sapiens
ENSDARG00000038222	tyw3	86	58.228	ENSAPOG00000009462	tyw3	89	58.228	Acanthochromis_polyacanthus
ENSDARG00000038222	tyw3	86	54.955	ENSAMEG00000003461	TYW3	85	54.955	Ailuropoda_melanoleuca
ENSDARG00000038222	tyw3	87	63.182	ENSACIG00000002242	tyw3	88	64.545	Amphilophus_citrinellus
ENSDARG00000038222	tyw3	86	60.417	ENSAOCG00000002161	tyw3	89	60.417	Amphiprion_ocellaris
ENSDARG00000038222	tyw3	76	47.664	ENSAPEG00000009395	tyw3	71	74.242	Amphiprion_percula
ENSDARG00000038222	tyw3	88	65.158	ENSATEG00000004411	-	89	65.158	Anabas_testudineus
ENSDARG00000038222	tyw3	88	65.158	ENSATEG00000004518	tyw3	89	65.158	Anabas_testudineus
ENSDARG00000038222	tyw3	92	51.429	ENSACAG00000011380	TYW3	92	51.837	Anolis_carolinensis
ENSDARG00000038222	tyw3	86	58.636	ENSANAG00000034485	TYW3	85	58.636	Aotus_nancymaae
ENSDARG00000038222	tyw3	88	63.393	ENSACLG00000022833	tyw3	89	63.393	Astatotilapia_calliptera
ENSDARG00000038222	tyw3	96	65.844	ENSAMXG00000039965	tyw3	97	66.532	Astyanax_mexicanus
ENSDARG00000038222	tyw3	85	58.140	ENSBTAG00000005196	TYW3	83	58.140	Bos_taurus
ENSDARG00000038222	tyw3	96	54.065	ENSCJAG00000006550	TYW3	95	54.065	Callithrix_jacchus
ENSDARG00000038222	tyw3	72	55.376	ENSCAFG00000032209	TYW3	86	55.376	Canis_familiaris
ENSDARG00000038222	tyw3	87	54.911	ENSCAFG00020017095	TYW3	80	54.911	Canis_lupus_dingo
ENSDARG00000038222	tyw3	85	59.070	ENSCHIG00000009333	TYW3	83	59.070	Capra_hircus
ENSDARG00000038222	tyw3	90	50.870	ENSTSYG00000006369	TYW3	93	50.870	Carlito_syrichta
ENSDARG00000038222	tyw3	86	58.636	ENSCCAG00000034210	TYW3	85	58.636	Cebus_capucinus
ENSDARG00000038222	tyw3	96	52.245	ENSCATG00000044397	TYW3	95	52.245	Cercocebus_atys
ENSDARG00000038222	tyw3	86	57.798	ENSCLAG00000004370	TYW3	80	57.798	Chinchilla_lanigera
ENSDARG00000038222	tyw3	96	52.245	ENSCSAG00000001387	TYW3	95	52.245	Chlorocebus_sabaeus
ENSDARG00000038222	tyw3	98	54.941	ENSCPBG00000017047	TYW3	99	54.941	Chrysemys_picta_bellii
ENSDARG00000038222	tyw3	96	53.659	ENSCANG00000036108	TYW3	95	53.659	Colobus_angolensis_palliatus
ENSDARG00000038222	tyw3	88	51.754	ENSCGRG00001022820	Tyw3	96	55.072	Cricetulus_griseus_chok1gshd
ENSDARG00000038222	tyw3	65	51.176	ENSCGRG00000003132	Tyw3	93	56.250	Cricetulus_griseus_crigri
ENSDARG00000038222	tyw3	87	59.664	ENSCSEG00000021219	tyw3	84	60.256	Cynoglossus_semilaevis
ENSDARG00000038222	tyw3	77	60.825	ENSCVAG00000003270	tyw3	98	52.653	Cyprinodon_variegatus
ENSDARG00000038222	tyw3	97	53.036	ENSDNOG00000033863	TYW3	96	53.036	Dasypus_novemcinctus
ENSDARG00000038222	tyw3	53	66.418	ENSETEG00000012572	TYW3	67	66.418	Echinops_telfairi
ENSDARG00000038222	tyw3	51	56.250	ENSEBUG00000014020	tyw3	51	56.250	Eptatretus_burgeri
ENSDARG00000038222	tyw3	76	62.827	ENSEASG00005007776	TYW3	73	62.827	Equus_asinus_asinus
ENSDARG00000038222	tyw3	76	62.827	ENSECAG00000007888	TYW3	73	62.827	Equus_caballus
ENSDARG00000038222	tyw3	85	51.818	ENSEEUG00000009289	TYW3	84	51.818	Erinaceus_europaeus
ENSDARG00000038222	tyw3	90	70.044	ENSELUG00000023000	tyw3	91	70.044	Esox_lucius
ENSDARG00000038222	tyw3	87	55.605	ENSFCAG00000035340	TYW3	86	55.605	Felis_catus
ENSDARG00000038222	tyw3	76	62.827	ENSFDAG00000003816	TYW3	74	62.827	Fukomys_damarensis
ENSDARG00000038222	tyw3	77	64.433	ENSFHEG00000001347	tyw3	78	64.433	Fundulus_heteroclitus
ENSDARG00000038222	tyw3	96	48.617	ENSGALG00000032549	TYW3	97	48.617	Gallus_gallus
ENSDARG00000038222	tyw3	79	62.312	ENSGAFG00000012457	tyw3	75	62.312	Gambusia_affinis
ENSDARG00000038222	tyw3	76	66.492	ENSGACG00000014630	tyw3	84	66.492	Gasterosteus_aculeatus
ENSDARG00000038222	tyw3	86	57.727	ENSGGOG00000013676	TYW3	93	52.917	Gorilla_gorilla
ENSDARG00000038222	tyw3	76	62.827	ENSHGLG00000004440	TYW3	74	62.827	Heterocephalus_glaber_female
ENSDARG00000038222	tyw3	76	58.639	ENSHGLG00100018315	TYW3	73	58.639	Heterocephalus_glaber_male
ENSDARG00000038222	tyw3	76	62.632	ENSHCOG00000016590	TYW3	90	62.632	Hippocampus_comes
ENSDARG00000038222	tyw3	85	72.222	ENSIPUG00000012907	tyw3	80	69.456	Ictalurus_punctatus
ENSDARG00000038222	tyw3	76	52.880	ENSSTOG00000028816	TYW3	67	52.880	Ictidomys_tridecemlineatus
ENSDARG00000038222	tyw3	55	62.590	ENSJJAG00000005103	-	97	62.590	Jaculus_jaculus
ENSDARG00000038222	tyw3	77	65.464	ENSKMAG00000020761	tyw3	71	65.464	Kryptolebias_marmoratus
ENSDARG00000038222	tyw3	88	64.253	ENSLBEG00000021318	tyw3	89	65.315	Labrus_bergylta
ENSDARG00000038222	tyw3	92	63.793	ENSLACG00000012636	TYW3	91	62.931	Latimeria_chalumnae
ENSDARG00000038222	tyw3	92	62.771	ENSLOCG00000003437	tyw3	91	62.771	Lepisosteus_oculatus
ENSDARG00000038222	tyw3	86	57.919	ENSLAFG00000011373	TYW3	83	58.605	Loxodonta_africana
ENSDARG00000038222	tyw3	96	51.429	ENSMFAG00000003496	TYW3	95	51.429	Macaca_fascicularis
ENSDARG00000038222	tyw3	96	42.857	ENSMMUG00000014595	TYW3	88	51.064	Macaca_mulatta
ENSDARG00000038222	tyw3	96	51.429	ENSMNEG00000028346	TYW3	95	51.429	Macaca_nemestrina
ENSDARG00000038222	tyw3	96	52.245	ENSMLEG00000041647	TYW3	95	52.245	Mandrillus_leucophaeus
ENSDARG00000038222	tyw3	76	70.681	ENSMAMG00000010987	tyw3	95	60.558	Mastacembelus_armatus
ENSDARG00000038222	tyw3	86	56.540	ENSMZEG00005023808	tyw3	89	58.228	Maylandia_zebra
ENSDARG00000038222	tyw3	88	32.328	ENSMAUG00000000522	Tyw3	92	48.750	Mesocricetus_auratus
ENSDARG00000038222	tyw3	95	54.545	ENSMICG00000015883	TYW3	90	54.545	Microcebus_murinus
ENSDARG00000038222	tyw3	90	62.115	ENSMMOG00000021442	tyw3	91	62.115	Mola_mola
ENSDARG00000038222	tyw3	99	53.543	ENSMODG00000019082	TYW3	91	53.543	Monodelphis_domestica
ENSDARG00000038222	tyw3	86	62.869	ENSMALG00000014442	tyw3	89	62.869	Monopterus_albus
ENSDARG00000038222	tyw3	97	48.790	MGP_CAROLIEiJ_G0025755	Tyw3	96	56.522	Mus_caroli
ENSDARG00000038222	tyw3	97	48.387	ENSMUSG00000047583	Tyw3	96	56.522	Mus_musculus
ENSDARG00000038222	tyw3	97	50.000	MGP_PahariEiJ_G0027206	Tyw3	96	57.246	Mus_pahari
ENSDARG00000038222	tyw3	97	48.387	MGP_SPRETEiJ_G0026708	Tyw3	96	55.797	Mus_spretus
ENSDARG00000038222	tyw3	87	54.709	ENSMPUG00000010967	TYW3	86	54.709	Mustela_putorius_furo
ENSDARG00000038222	tyw3	76	62.827	ENSMLUG00000005999	TYW3	74	62.827	Myotis_lucifugus
ENSDARG00000038222	tyw3	55	58.273	ENSNGAG00000000586	-	96	58.273	Nannospalax_galili
ENSDARG00000038222	tyw3	96	52.245	ENSNLEG00000009556	TYW3	95	52.245	Nomascus_leucogenys
ENSDARG00000038222	tyw3	77	44.845	ENSOPRG00000014182	TYW3	76	44.845	Ochotona_princeps
ENSDARG00000038222	tyw3	92	54.894	ENSODEG00000005361	TYW3	96	60.432	Octodon_degus
ENSDARG00000038222	tyw3	76	64.921	ENSONIG00000019965	tyw3	97	64.921	Oreochromis_niloticus
ENSDARG00000038222	tyw3	77	54.359	ENSOANG00000002172	-	98	54.359	Ornithorhynchus_anatinus
ENSDARG00000038222	tyw3	76	62.827	ENSOCUG00000003043	TYW3	75	62.827	Oryctolagus_cuniculus
ENSDARG00000038222	tyw3	97	53.755	ENSORLG00000004470	tyw3	95	53.755	Oryzias_latipes
ENSDARG00000038222	tyw3	97	52.459	ENSORLG00020003793	tyw3	95	53.360	Oryzias_latipes_hni
ENSDARG00000038222	tyw3	97	52.459	ENSORLG00015006950	tyw3	95	54.150	Oryzias_latipes_hsok
ENSDARG00000038222	tyw3	88	56.522	ENSOMEG00000016176	tyw3	90	56.522	Oryzias_melastigma
ENSDARG00000038222	tyw3	95	52.720	ENSOGAG00000011590	-	92	52.720	Otolemur_garnettii
ENSDARG00000038222	tyw3	76	57.216	ENSOGAG00000025029	-	74	57.216	Otolemur_garnettii
ENSDARG00000038222	tyw3	85	58.605	ENSOARG00000012508	TYW3	83	58.605	Ovis_aries
ENSDARG00000038222	tyw3	86	58.182	ENSPPAG00000043438	TYW3	93	53.333	Pan_paniscus
ENSDARG00000038222	tyw3	87	55.909	ENSPPRG00000023209	TYW3	86	55.909	Panthera_pardus
ENSDARG00000038222	tyw3	87	55.605	ENSPTIG00000017448	TYW3	86	55.605	Panthera_tigris_altaica
ENSDARG00000038222	tyw3	86	58.636	ENSPTRG00000000867	TYW3	93	53.750	Pan_troglodytes
ENSDARG00000038222	tyw3	96	52.653	ENSPANG00000013397	TYW3	95	52.653	Papio_anubis
ENSDARG00000038222	tyw3	98	55.109	ENSPKIG00000009802	tyw3	99	55.109	Paramormyrops_kingsleyae
ENSDARG00000038222	tyw3	65	53.254	ENSPSIG00000008432	TYW3	98	53.254	Pelodiscus_sinensis
ENSDARG00000038222	tyw3	91	56.332	ENSPMGG00000005290	tyw3	86	56.332	Periophthalmus_magnuspinnatus
ENSDARG00000038222	tyw3	89	53.478	ENSPEMG00000013100	Tyw3	96	55.797	Peromyscus_maniculatus_bairdii
ENSDARG00000038222	tyw3	85	59.259	ENSPCIG00000024204	TYW3	72	59.259	Phascolarctos_cinereus
ENSDARG00000038222	tyw3	78	62.944	ENSPFOG00000000927	tyw3	74	62.944	Poecilia_formosa
ENSDARG00000038222	tyw3	76	64.921	ENSPLAG00000009891	tyw3	72	64.921	Poecilia_latipinna
ENSDARG00000038222	tyw3	78	62.944	ENSPMEG00000002006	tyw3	74	62.944	Poecilia_mexicana
ENSDARG00000038222	tyw3	86	57.207	ENSPREG00000012341	tyw3	83	57.207	Poecilia_reticulata
ENSDARG00000038222	tyw3	76	64.398	ENSPPYG00000001234	TYW3	74	64.398	Pongo_abelii
ENSDARG00000038222	tyw3	92	55.274	ENSPCAG00000000524	TYW3	92	55.274	Procavia_capensis
ENSDARG00000038222	tyw3	86	57.991	ENSPCOG00000023207	TYW3	90	54.167	Propithecus_coquereli
ENSDARG00000038222	tyw3	75	59.893	ENSPVAG00000002356	TYW3	75	59.893	Pteropus_vampyrus
ENSDARG00000038222	tyw3	73	67.204	ENSPNYG00000017982	tyw3	59	67.204	Pundamilia_nyererei
ENSDARG00000038222	tyw3	99	66.008	ENSPNAG00000028431	tyw3	99	66.008	Pygocentrus_nattereri
ENSDARG00000038222	tyw3	98	50.201	ENSRNOG00000028328	Tyw3	85	50.201	Rattus_norvegicus
ENSDARG00000038222	tyw3	96	53.469	ENSRROG00000034171	TYW3	95	53.469	Rhinopithecus_roxellana
ENSDARG00000038222	tyw3	86	59.545	ENSSBOG00000022917	TYW3	85	59.545	Saimiri_boliviensis_boliviensis
ENSDARG00000038222	tyw3	96	65.145	ENSSFOG00015021842	tyw3	95	65.145	Scleropages_formosus
ENSDARG00000038222	tyw3	76	67.016	ENSSMAG00000019609	tyw3	93	56.863	Scophthalmus_maximus
ENSDARG00000038222	tyw3	92	59.055	ENSSDUG00000003674	tyw3	95	59.055	Seriola_dumerili
ENSDARG00000038222	tyw3	92	59.055	ENSSLDG00000010425	tyw3	95	59.055	Seriola_lalandi_dorsalis
ENSDARG00000038222	tyw3	71	51.630	ENSSARG00000001097	TYW3	92	51.630	Sorex_araneus
ENSDARG00000038222	tyw3	87	58.559	ENSSPUG00000007880	TYW3	98	53.725	Sphenodon_punctatus
ENSDARG00000038222	tyw3	76	70.526	ENSSPAG00000013786	tyw3	89	59.350	Stegastes_partitus
ENSDARG00000038222	tyw3	95	52.049	ENSSSCG00000003779	TYW3	91	56.863	Sus_scrofa
ENSDARG00000038222	tyw3	85	61.017	ENSTRUG00000023563	tyw3	88	61.017	Takifugu_rubripes
ENSDARG00000038222	tyw3	77	64.249	ENSTNIG00000003368	tyw3	98	64.249	Tetraodon_nigroviridis
ENSDARG00000038222	tyw3	86	55.251	ENSTBEG00000017002	TYW3	85	55.251	Tupaia_belangeri
ENSDARG00000038222	tyw3	86	54.955	ENSTTRG00000010464	TYW3	85	54.955	Tursiops_truncatus
ENSDARG00000038222	tyw3	86	56.757	ENSUAMG00000010803	TYW3	87	56.757	Ursus_americanus
ENSDARG00000038222	tyw3	86	56.757	ENSUMAG00000006460	TYW3	86	56.757	Ursus_maritimus
ENSDARG00000038222	tyw3	72	62.778	ENSVPAG00000006900	TYW3	97	62.778	Vicugna_pacos
ENSDARG00000038222	tyw3	87	55.804	ENSVVUG00000006902	TYW3	80	55.804	Vulpes_vulpes
ENSDARG00000038222	tyw3	77	65.285	ENSXETG00000002996	tyw3	96	58.264	Xenopus_tropicalis
ENSDARG00000038222	tyw3	73	64.865	ENSXCOG00000000715	tyw3	85	58.904	Xiphophorus_couchianus
ENSDARG00000038222	tyw3	93	53.909	ENSXMAG00000006464	tyw3	97	53.909	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005575	cellular_component	-	ND	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0031591	wybutosine biosynthetic process	21873635.	IBA	Process
GO:0032259	methylation	-	IEA	Process