EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000038505 (Gene tree)
Gene ID: 550263
Gene Symbol: polr2h
Alias: zgc:110289
Full Name: info polymerase (RNA) II (DNA directed) polypeptide H
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 9764 bases
Position: chr22:36521139-36530902
Accession: ZDB-GENE-050417-66
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000056187	RNA_pol_Rpb8	PF03870.15	8.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000056188	-	4649	-	ENSDARP00000056187	150 (aa)	-	Q568H8

Gene Model

Click here to download ENSDARG00000038505's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG
dre04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000038505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000038505	polr2h	100	97.333	ENSG00000163882	POLR2H	100	97.368	Homo_sapiens
ENSDARG00000038505	polr2h	100	99.333	ENSAPOG00000023660	polr2h	100	99.333	Acanthochromis_polyacanthus
ENSDARG00000038505	polr2h	100	97.333	ENSAMEG00000017011	POLR2H	100	97.333	Ailuropoda_melanoleuca
ENSDARG00000038505	polr2h	76	97.368	ENSACIG00000013167	polr2h	100	97.368	Amphilophus_citrinellus
ENSDARG00000038505	polr2h	100	99.333	ENSAOCG00000003084	polr2h	100	99.333	Amphiprion_ocellaris
ENSDARG00000038505	polr2h	100	99.333	ENSAPEG00000002614	polr2h	100	99.333	Amphiprion_percula
ENSDARG00000038505	polr2h	100	99.333	ENSATEG00000013227	polr2h	100	99.333	Anabas_testudineus
ENSDARG00000038505	polr2h	100	96.667	ENSACAG00000002828	POLR2H	100	96.667	Anolis_carolinensis
ENSDARG00000038505	polr2h	100	97.333	ENSANAG00000020244	POLR2H	100	97.333	Aotus_nancymaae
ENSDARG00000038505	polr2h	100	99.333	ENSACLG00000026253	polr2h	100	99.333	Astatotilapia_calliptera
ENSDARG00000038505	polr2h	100	98.667	ENSAMXG00000001800	polr2h	100	98.667	Astyanax_mexicanus
ENSDARG00000038505	polr2h	100	97.333	ENSBTAG00000040199	POLR2H	100	97.333	Bos_taurus
ENSDARG00000038505	polr2h	100	63.333	WBGene00017830	rpb-8	100	63.333	Caenorhabditis_elegans
ENSDARG00000038505	polr2h	100	97.333	ENSCJAG00000014959	POLR2H	100	97.333	Callithrix_jacchus
ENSDARG00000038505	polr2h	100	97.333	ENSCAFG00020002558	POLR2H	100	97.333	Canis_lupus_dingo
ENSDARG00000038505	polr2h	100	97.333	ENSCHIG00000006695	POLR2H	100	97.333	Capra_hircus
ENSDARG00000038505	polr2h	100	92.000	ENSTSYG00000031691	-	82	92.000	Carlito_syrichta
ENSDARG00000038505	polr2h	100	83.444	ENSTSYG00000031988	-	100	83.444	Carlito_syrichta
ENSDARG00000038505	polr2h	100	97.333	ENSTSYG00000007705	-	100	97.333	Carlito_syrichta
ENSDARG00000038505	polr2h	100	96.667	ENSCPOG00000040303	POLR2H	100	96.667	Cavia_porcellus
ENSDARG00000038505	polr2h	100	97.333	ENSCCAG00000035087	POLR2H	100	97.333	Cebus_capucinus
ENSDARG00000038505	polr2h	100	97.333	ENSCATG00000045313	POLR2H	100	97.333	Cercocebus_atys
ENSDARG00000038505	polr2h	100	96.667	ENSCLAG00000013016	POLR2H	100	96.667	Chinchilla_lanigera
ENSDARG00000038505	polr2h	100	97.333	ENSCSAG00000013724	POLR2H	80	97.333	Chlorocebus_sabaeus
ENSDARG00000038505	polr2h	74	96.396	ENSCHOG00000009216	POLR2H	100	96.396	Choloepus_hoffmanni
ENSDARG00000038505	polr2h	100	97.333	ENSCPBG00000001462	POLR2H	100	97.333	Chrysemys_picta_bellii
ENSDARG00000038505	polr2h	99	74.667	ENSCING00000011417	-	99	74.667	Ciona_intestinalis
ENSDARG00000038505	polr2h	99	74.000	ENSCSAVG00000006151	-	99	74.000	Ciona_savignyi
ENSDARG00000038505	polr2h	100	97.333	ENSCANG00000023708	POLR2H	100	97.333	Colobus_angolensis_palliatus
ENSDARG00000038505	polr2h	100	97.333	ENSCGRG00001004900	Polr2h	100	97.333	Cricetulus_griseus_chok1gshd
ENSDARG00000038505	polr2h	100	97.333	ENSCGRG00000014304	Polr2h	100	97.333	Cricetulus_griseus_crigri
ENSDARG00000038505	polr2h	100	97.333	ENSCSEG00000015264	polr2h	100	97.333	Cynoglossus_semilaevis
ENSDARG00000038505	polr2h	100	98.667	ENSCVAG00000012410	polr2h	100	98.667	Cyprinodon_variegatus
ENSDARG00000038505	polr2h	100	97.333	ENSDNOG00000044402	POLR2H	100	97.333	Dasypus_novemcinctus
ENSDARG00000038505	polr2h	100	97.333	ENSDORG00000027475	Polr2h	100	97.333	Dipodomys_ordii
ENSDARG00000038505	polr2h	100	77.333	FBgn0037121	Rpb8	100	77.333	Drosophila_melanogaster
ENSDARG00000038505	polr2h	60	98.485	ENSETEG00000004231	-	60	98.485	Echinops_telfairi
ENSDARG00000038505	polr2h	100	74.857	ENSEBUG00000008233	POLR2H	100	74.857	Eptatretus_burgeri
ENSDARG00000038505	polr2h	100	97.333	ENSEASG00005013088	POLR2H	100	97.333	Equus_asinus_asinus
ENSDARG00000038505	polr2h	100	97.333	ENSECAG00000005828	POLR2H	100	97.333	Equus_caballus
ENSDARG00000038505	polr2h	55	95.181	ENSEEUG00000006139	-	100	95.181	Erinaceus_europaeus
ENSDARG00000038505	polr2h	100	98.000	ENSELUG00000006347	polr2h	100	98.000	Esox_lucius
ENSDARG00000038505	polr2h	100	97.333	ENSFCAG00000007797	POLR2H	100	97.333	Felis_catus
ENSDARG00000038505	polr2h	100	97.333	ENSFALG00000008177	POLR2H	100	97.333	Ficedula_albicollis
ENSDARG00000038505	polr2h	100	97.333	ENSFDAG00000008781	POLR2H	100	97.333	Fukomys_damarensis
ENSDARG00000038505	polr2h	100	98.667	ENSFHEG00000017819	polr2h	100	98.667	Fundulus_heteroclitus
ENSDARG00000038505	polr2h	100	97.333	ENSGALG00000008534	POLR2H	100	97.333	Gallus_gallus
ENSDARG00000038505	polr2h	100	98.667	ENSGAFG00000015424	polr2h	100	98.667	Gambusia_affinis
ENSDARG00000038505	polr2h	100	98.000	ENSGACG00000009019	polr2h	100	98.000	Gasterosteus_aculeatus
ENSDARG00000038505	polr2h	100	97.333	ENSGAGG00000009016	POLR2H	100	97.333	Gopherus_agassizii
ENSDARG00000038505	polr2h	83	97.600	ENSGGOG00000002912	-	100	97.600	Gorilla_gorilla
ENSDARG00000038505	polr2h	100	99.333	ENSHBUG00000006685	polr2h	100	99.333	Haplochromis_burtoni
ENSDARG00000038505	polr2h	100	97.333	ENSHGLG00000012488	POLR2H	100	97.333	Heterocephalus_glaber_female
ENSDARG00000038505	polr2h	100	97.333	ENSHGLG00100009576	POLR2H	100	97.333	Heterocephalus_glaber_male
ENSDARG00000038505	polr2h	100	98.667	ENSHCOG00000010315	polr2h	100	98.667	Hippocampus_comes
ENSDARG00000038505	polr2h	100	98.667	ENSHCOG00000010338	polr2h	100	98.667	Hippocampus_comes
ENSDARG00000038505	polr2h	100	96.667	ENSIPUG00000024331	polr2h	100	96.667	Ictalurus_punctatus
ENSDARG00000038505	polr2h	100	97.333	ENSSTOG00000008300	POLR2H	100	97.333	Ictidomys_tridecemlineatus
ENSDARG00000038505	polr2h	100	97.333	ENSJJAG00000015574	Polr2h	100	97.333	Jaculus_jaculus
ENSDARG00000038505	polr2h	100	98.000	ENSKMAG00000008353	polr2h	100	98.000	Kryptolebias_marmoratus
ENSDARG00000038505	polr2h	100	99.333	ENSLBEG00000018905	polr2h	100	99.333	Labrus_bergylta
ENSDARG00000038505	polr2h	100	98.000	ENSLACG00000015017	POLR2H	100	98.000	Latimeria_chalumnae
ENSDARG00000038505	polr2h	75	97.321	ENSLOCG00000008946	polr2h	100	97.321	Lepisosteus_oculatus
ENSDARG00000038505	polr2h	100	97.333	ENSLAFG00000003573	POLR2H	100	97.333	Loxodonta_africana
ENSDARG00000038505	polr2h	100	97.333	ENSMFAG00000038115	POLR2H	100	97.333	Macaca_fascicularis
ENSDARG00000038505	polr2h	100	97.333	ENSMMUG00000007524	POLR2H	100	97.333	Macaca_mulatta
ENSDARG00000038505	polr2h	100	97.333	ENSMNEG00000037272	POLR2H	100	97.333	Macaca_nemestrina
ENSDARG00000038505	polr2h	100	97.333	ENSMLEG00000039827	POLR2H	100	97.333	Mandrillus_leucophaeus
ENSDARG00000038505	polr2h	100	98.667	ENSMAMG00000001923	polr2h	100	98.667	Mastacembelus_armatus
ENSDARG00000038505	polr2h	100	99.333	ENSMZEG00005017494	polr2h	100	99.333	Maylandia_zebra
ENSDARG00000038505	polr2h	100	97.333	ENSMAUG00000016338	Polr2h	100	97.333	Mesocricetus_auratus
ENSDARG00000038505	polr2h	100	97.333	ENSMICG00000048991	-	100	97.333	Microcebus_murinus
ENSDARG00000038505	polr2h	96	95.833	ENSMICG00000027485	-	94	95.833	Microcebus_murinus
ENSDARG00000038505	polr2h	100	74.667	ENSMICG00000033578	-	100	74.667	Microcebus_murinus
ENSDARG00000038505	polr2h	100	97.333	ENSMOCG00000004886	Polr2h	100	97.333	Microtus_ochrogaster
ENSDARG00000038505	polr2h	100	99.333	ENSMMOG00000008575	polr2h	100	99.333	Mola_mola
ENSDARG00000038505	polr2h	100	97.333	ENSMODG00000002570	POLR2H	100	97.333	Monodelphis_domestica
ENSDARG00000038505	polr2h	100	98.667	ENSMALG00000015108	polr2h	100	98.667	Monopterus_albus
ENSDARG00000038505	polr2h	100	97.333	MGP_CAROLIEiJ_G0020589	Polr2h	100	97.333	Mus_caroli
ENSDARG00000038505	polr2h	100	97.333	ENSMUSG00000021018	Polr2h	100	97.333	Mus_musculus
ENSDARG00000038505	polr2h	100	97.333	MGP_SPRETEiJ_G0021486	Polr2h	100	97.333	Mus_spretus
ENSDARG00000038505	polr2h	100	97.333	ENSMPUG00000002852	POLR2H	100	97.333	Mustela_putorius_furo
ENSDARG00000038505	polr2h	100	97.333	ENSMLUG00000022295	POLR2H	100	97.333	Myotis_lucifugus
ENSDARG00000038505	polr2h	100	76.667	ENSNGAG00000015806	-	100	76.667	Nannospalax_galili
ENSDARG00000038505	polr2h	100	97.333	ENSNGAG00000023997	-	100	97.333	Nannospalax_galili
ENSDARG00000038505	polr2h	100	99.333	ENSNBRG00000001133	polr2h	100	99.333	Neolamprologus_brichardi
ENSDARG00000038505	polr2h	100	97.333	ENSNLEG00000029447	POLR2H	100	97.333	Nomascus_leucogenys
ENSDARG00000038505	polr2h	60	96.667	ENSMEUG00000014141	-	100	96.667	Notamacropus_eugenii
ENSDARG00000038505	polr2h	55	96.386	ENSOPRG00000015024	-	100	96.386	Ochotona_princeps
ENSDARG00000038505	polr2h	100	96.667	ENSODEG00000013008	-	100	96.667	Octodon_degus
ENSDARG00000038505	polr2h	100	96.667	ENSODEG00000020005	-	100	96.667	Octodon_degus
ENSDARG00000038505	polr2h	100	99.333	ENSONIG00000012493	polr2h	100	99.333	Oreochromis_niloticus
ENSDARG00000038505	polr2h	100	97.333	ENSOANG00000010454	POLR2H	100	97.333	Ornithorhynchus_anatinus
ENSDARG00000038505	polr2h	100	97.333	ENSOCUG00000007078	POLR2H	100	97.333	Oryctolagus_cuniculus
ENSDARG00000038505	polr2h	100	98.000	ENSORLG00000023347	polr2h	100	98.000	Oryzias_latipes
ENSDARG00000038505	polr2h	100	98.000	ENSORLG00020017770	polr2h	100	98.000	Oryzias_latipes_hni
ENSDARG00000038505	polr2h	100	98.000	ENSORLG00015013505	polr2h	100	98.000	Oryzias_latipes_hsok
ENSDARG00000038505	polr2h	100	98.000	ENSOMEG00000021100	polr2h	100	98.000	Oryzias_melastigma
ENSDARG00000038505	polr2h	100	97.333	ENSOGAG00000001599	POLR2H	100	97.333	Otolemur_garnettii
ENSDARG00000038505	polr2h	100	97.333	ENSOARG00000020584	POLR2H	100	97.333	Ovis_aries
ENSDARG00000038505	polr2h	100	97.333	ENSPPAG00000035658	-	100	97.333	Pan_paniscus
ENSDARG00000038505	polr2h	100	97.333	ENSPPRG00000004001	POLR2H	100	97.333	Panthera_pardus
ENSDARG00000038505	polr2h	100	97.333	ENSPTIG00000010551	POLR2H	100	97.333	Panthera_tigris_altaica
ENSDARG00000038505	polr2h	100	97.333	ENSPTRG00000047600	-	100	78.667	Pan_troglodytes
ENSDARG00000038505	polr2h	100	97.333	ENSPANG00000020585	POLR2H	100	97.333	Papio_anubis
ENSDARG00000038505	polr2h	100	99.333	ENSPKIG00000022836	polr2h	100	99.333	Paramormyrops_kingsleyae
ENSDARG00000038505	polr2h	76	97.368	ENSPSIG00000017108	POLR2H	100	97.368	Pelodiscus_sinensis
ENSDARG00000038505	polr2h	100	98.000	ENSPMGG00000004693	polr2h	94	98.000	Periophthalmus_magnuspinnatus
ENSDARG00000038505	polr2h	100	92.000	ENSPMAG00000008230	-	100	92.000	Petromyzon_marinus
ENSDARG00000038505	polr2h	100	98.667	ENSPFOG00000024200	polr2h	100	98.667	Poecilia_formosa
ENSDARG00000038505	polr2h	100	98.667	ENSPLAG00000024033	polr2h	100	98.667	Poecilia_latipinna
ENSDARG00000038505	polr2h	100	98.667	ENSPMEG00000005909	polr2h	100	98.667	Poecilia_mexicana
ENSDARG00000038505	polr2h	100	98.667	ENSPREG00000007275	polr2h	100	98.667	Poecilia_reticulata
ENSDARG00000038505	polr2h	100	97.333	ENSPPYG00000014357	-	100	97.333	Pongo_abelii
ENSDARG00000038505	polr2h	100	68.000	ENSPCAG00000015035	-	100	68.000	Procavia_capensis
ENSDARG00000038505	polr2h	100	97.333	ENSPCOG00000021194	POLR2H	100	97.333	Propithecus_coquereli
ENSDARG00000038505	polr2h	100	83.333	ENSPVAG00000004869	POLR2H	100	83.333	Pteropus_vampyrus
ENSDARG00000038505	polr2h	100	99.333	ENSPNYG00000020592	polr2h	100	99.333	Pundamilia_nyererei
ENSDARG00000038505	polr2h	100	97.333	ENSPNAG00000010676	polr2h	100	97.333	Pygocentrus_nattereri
ENSDARG00000038505	polr2h	100	97.333	ENSRNOG00000049116	Polr2h	100	97.333	Rattus_norvegicus
ENSDARG00000038505	polr2h	100	97.333	ENSRNOG00000001748	LOC100912534	100	97.333	Rattus_norvegicus
ENSDARG00000038505	polr2h	100	97.333	ENSRBIG00000032148	POLR2H	100	97.333	Rhinopithecus_bieti
ENSDARG00000038505	polr2h	100	97.333	ENSRROG00000040465	POLR2H	100	97.333	Rhinopithecus_roxellana
ENSDARG00000038505	polr2h	98	35.714	YOR224C	RPB8	100	35.714	Saccharomyces_cerevisiae
ENSDARG00000038505	polr2h	100	97.333	ENSSBOG00000033101	POLR2H	100	78.667	Saimiri_boliviensis_boliviensis
ENSDARG00000038505	polr2h	84	97.619	ENSSHAG00000006304	POLR2H	91	97.619	Sarcophilus_harrisii
ENSDARG00000038505	polr2h	100	98.667	ENSSFOG00015014221	polr2h	100	98.667	Scleropages_formosus
ENSDARG00000038505	polr2h	100	99.333	ENSSMAG00000001049	polr2h	100	99.333	Scophthalmus_maximus
ENSDARG00000038505	polr2h	100	99.333	ENSSDUG00000005936	polr2h	100	99.333	Seriola_dumerili
ENSDARG00000038505	polr2h	100	99.333	ENSSLDG00000002246	polr2h	100	99.333	Seriola_lalandi_dorsalis
ENSDARG00000038505	polr2h	100	97.333	ENSSARG00000003429	POLR2H	100	97.333	Sorex_araneus
ENSDARG00000038505	polr2h	76	96.491	ENSSPUG00000014013	-	100	96.491	Sphenodon_punctatus
ENSDARG00000038505	polr2h	100	99.333	ENSSPAG00000012297	polr2h	100	99.333	Stegastes_partitus
ENSDARG00000038505	polr2h	100	97.333	ENSSSCG00000022507	POLR2H	100	97.333	Sus_scrofa
ENSDARG00000038505	polr2h	95	97.183	ENSTGUG00000010383	POLR2H	99	97.183	Taeniopygia_guttata
ENSDARG00000038505	polr2h	100	98.000	ENSTRUG00000007619	polr2h	100	98.000	Takifugu_rubripes
ENSDARG00000038505	polr2h	100	98.667	ENSTNIG00000012183	polr2h	100	98.667	Tetraodon_nigroviridis
ENSDARG00000038505	polr2h	100	58.667	ENSTBEG00000005571	-	100	58.667	Tupaia_belangeri
ENSDARG00000038505	polr2h	100	97.333	ENSTTRG00000011254	POLR2H	100	97.333	Tursiops_truncatus
ENSDARG00000038505	polr2h	100	97.333	ENSUAMG00000004615	POLR2H	100	97.333	Ursus_americanus
ENSDARG00000038505	polr2h	100	97.333	ENSUMAG00000005255	POLR2H	100	97.333	Ursus_maritimus
ENSDARG00000038505	polr2h	100	78.667	ENSVPAG00000009011	-	100	78.667	Vicugna_pacos
ENSDARG00000038505	polr2h	100	97.333	ENSVVUG00000012241	POLR2H	100	97.333	Vulpes_vulpes
ENSDARG00000038505	polr2h	100	95.333	ENSXETG00000017291	polr2h	100	95.333	Xenopus_tropicalis
ENSDARG00000038505	polr2h	100	98.667	ENSXCOG00000003501	polr2h	100	98.667	Xiphophorus_couchianus
ENSDARG00000038505	polr2h	100	98.667	ENSXMAG00000005861	polr2h	100	98.667	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0001055	RNA polymerase II activity	21873635.	IBA	Function
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006366	transcription by RNA polymerase II	-	IEA	Process
GO:0006383	transcription by RNA polymerase III	-	IEA	Process