EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000038768 (Gene tree)
Gene ID: 550391
Gene Symbol: mrpl12
Alias: im:6893415|zgc:112445
Full Name: mitochondrial ribosomal protein L12
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 12342 bases
Position: chr3:50054187-50066528
Accession: ZDB-GENE-050417-187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000056617	Ribosomal_L12	PF00542.19	3.1e-19	1	1
ENSDARP00000129769	Ribosomal_L12	PF00542.19	5.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000056618	-	1057	-	ENSDARP00000056617	194 (aa)	-	Q566V8
ENSDART00000154561	-	1287	XM_009299749	ENSDARP00000129769	199 (aa)	XP_009298024	X1WHQ5

Gene Model

Click here to download ENSDARG00000038768's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000038768's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000038768	mrpl12	88	61.047	ENSG00000262814	MRPL12	93	60.417	Homo_sapiens
ENSDARG00000038768	mrpl12	99	75.385	ENSAPOG00000005018	mrpl12	100	75.500	Acanthochromis_polyacanthus
ENSDARG00000038768	mrpl12	99	74.359	ENSACIG00000006182	mrpl12	100	74.359	Amphilophus_citrinellus
ENSDARG00000038768	mrpl12	99	76.410	ENSAOCG00000003859	mrpl12	100	74.872	Amphiprion_ocellaris
ENSDARG00000038768	mrpl12	99	76.410	ENSAPEG00000005897	mrpl12	100	74.872	Amphiprion_percula
ENSDARG00000038768	mrpl12	99	71.282	ENSATEG00000023948	mrpl12	100	71.282	Anabas_testudineus
ENSDARG00000038768	mrpl12	84	68.902	ENSACAG00000010743	MRPL12	81	62.105	Anolis_carolinensis
ENSDARG00000038768	mrpl12	95	60.541	ENSANAG00000037237	-	93	59.474	Aotus_nancymaae
ENSDARG00000038768	mrpl12	95	57.754	ENSANAG00000020985	-	94	56.842	Aotus_nancymaae
ENSDARG00000038768	mrpl12	99	73.846	ENSACLG00000022963	mrpl12	100	73.846	Astatotilapia_calliptera
ENSDARG00000038768	mrpl12	99	74.242	ENSAMXG00000032543	mrpl12	100	74.872	Astyanax_mexicanus
ENSDARG00000038768	mrpl12	95	62.632	ENSBTAG00000000417	MRPL12	93	62.632	Bos_taurus
ENSDARG00000038768	mrpl12	79	39.752	WBGene00012361	mrpl-12	97	38.372	Caenorhabditis_elegans
ENSDARG00000038768	mrpl12	88	63.953	ENSCJAG00000001652	MRPL12	87	62.857	Callithrix_jacchus
ENSDARG00000038768	mrpl12	95	61.579	ENSCHIG00000027210	MRPL12	93	61.579	Capra_hircus
ENSDARG00000038768	mrpl12	95	60.963	ENSTSYG00000009746	MRPL12	93	60.000	Carlito_syrichta
ENSDARG00000038768	mrpl12	95	63.684	ENSCPOG00000035389	MRPL12	84	67.456	Cavia_porcellus
ENSDARG00000038768	mrpl12	95	60.963	ENSCCAG00000026887	MRPL12	93	60.000	Cebus_capucinus
ENSDARG00000038768	mrpl12	88	62.791	ENSCATG00000045041	MRPL12	93	60.526	Cercocebus_atys
ENSDARG00000038768	mrpl12	98	61.929	ENSCLAG00000012764	MRPL12	97	61.929	Chinchilla_lanigera
ENSDARG00000038768	mrpl12	88	62.209	ENSCSAG00000002234	MRPL12	93	58.947	Chlorocebus_sabaeus
ENSDARG00000038768	mrpl12	86	65.089	ENSCPBG00000011476	MRPL12	94	60.825	Chrysemys_picta_bellii
ENSDARG00000038768	mrpl12	95	44.324	ENSCING00000012945	-	97	44.737	Ciona_intestinalis
ENSDARG00000038768	mrpl12	88	63.372	ENSCANG00000029130	MRPL12	93	59.474	Colobus_angolensis_palliatus
ENSDARG00000038768	mrpl12	95	62.304	ENSCGRG00001005393	Mrpl12	93	62.694	Cricetulus_griseus_chok1gshd
ENSDARG00000038768	mrpl12	95	61.579	ENSCGRG00000015907	Mrpl12	92	61.979	Cricetulus_griseus_crigri
ENSDARG00000038768	mrpl12	100	72.081	ENSCSEG00000009238	mrpl12	100	72.081	Cynoglossus_semilaevis
ENSDARG00000038768	mrpl12	99	73.846	ENSCVAG00000008710	mrpl12	100	73.846	Cyprinodon_variegatus
ENSDARG00000038768	mrpl12	88	61.765	ENSDNOG00000042484	MRPL12	94	59.677	Dasypus_novemcinctus
ENSDARG00000038768	mrpl12	98	61.026	ENSDORG00000008074	Mrpl12	97	60.914	Dipodomys_ordii
ENSDARG00000038768	mrpl12	97	40.426	FBgn0011787	mRpL12	99	43.814	Drosophila_melanogaster
ENSDARG00000038768	mrpl12	96	59.474	ENSEASG00005005780	MRPL12	94	60.938	Equus_asinus_asinus
ENSDARG00000038768	mrpl12	96	59.474	ENSECAG00000009323	MRPL12	94	60.938	Equus_caballus
ENSDARG00000038768	mrpl12	94	58.378	ENSEEUG00000015613	MRPL12	93	58.378	Erinaceus_europaeus
ENSDARG00000038768	mrpl12	99	73.057	ENSELUG00000010073	mrpl12	100	71.212	Esox_lucius
ENSDARG00000038768	mrpl12	84	66.667	ENSFDAG00000014977	MRPL12	95	65.868	Fukomys_damarensis
ENSDARG00000038768	mrpl12	90	76.705	ENSFHEG00000014518	mrpl12	95	76.705	Fundulus_heteroclitus
ENSDARG00000038768	mrpl12	99	71.282	ENSGMOG00000008213	mrpl12	98	70.000	Gadus_morhua
ENSDARG00000038768	mrpl12	78	67.550	ENSGALG00000045753	MRPL12	80	67.550	Gallus_gallus
ENSDARG00000038768	mrpl12	99	76.410	ENSGAFG00000003529	mrpl12	92	76.000	Gambusia_affinis
ENSDARG00000038768	mrpl12	99	66.667	ENSGACG00000010541	mrpl12	97	67.179	Gasterosteus_aculeatus
ENSDARG00000038768	mrpl12	86	69.822	ENSGAGG00000013180	MRPL12	87	68.750	Gopherus_agassizii
ENSDARG00000038768	mrpl12	88	63.372	ENSGGOG00000009356	MRPL12	93	60.000	Gorilla_gorilla
ENSDARG00000038768	mrpl12	99	72.081	ENSHBUG00000004986	mrpl12	99	73.232	Haplochromis_burtoni
ENSDARG00000038768	mrpl12	98	60.914	ENSHGLG00000009470	MRPL12	96	60.914	Heterocephalus_glaber_female
ENSDARG00000038768	mrpl12	88	64.000	ENSHGLG00100005034	MRPL12	93	62.304	Heterocephalus_glaber_male
ENSDARG00000038768	mrpl12	99	73.196	ENSHCOG00000018775	mrpl12	100	72.165	Hippocampus_comes
ENSDARG00000038768	mrpl12	99	74.227	ENSIPUG00000007392	Mrpl12	100	72.727	Ictalurus_punctatus
ENSDARG00000038768	mrpl12	95	62.105	ENSSTOG00000031761	MRPL12	93	62.105	Ictidomys_tridecemlineatus
ENSDARG00000038768	mrpl12	95	61.702	ENSJJAG00000018729	Mrpl12	94	61.579	Jaculus_jaculus
ENSDARG00000038768	mrpl12	99	69.898	ENSKMAG00000012978	mrpl12	100	70.500	Kryptolebias_marmoratus
ENSDARG00000038768	mrpl12	99	72.308	ENSLBEG00000024610	mrpl12	100	72.821	Labrus_bergylta
ENSDARG00000038768	mrpl12	88	62.428	ENSLAFG00000004594	MRPL12	91	61.290	Loxodonta_africana
ENSDARG00000038768	mrpl12	88	62.791	ENSMFAG00000042253	MRPL12	93	60.000	Macaca_fascicularis
ENSDARG00000038768	mrpl12	88	62.791	ENSMNEG00000016503	MRPL12	93	60.000	Macaca_nemestrina
ENSDARG00000038768	mrpl12	88	62.209	ENSMLEG00000041715	MRPL12	93	59.474	Mandrillus_leucophaeus
ENSDARG00000038768	mrpl12	99	71.795	ENSMAMG00000020677	mrpl12	100	73.333	Mastacembelus_armatus
ENSDARG00000038768	mrpl12	99	73.846	ENSMZEG00005021473	mrpl12	100	73.846	Maylandia_zebra
ENSDARG00000038768	mrpl12	99	73.846	ENSMZEG00005011802	mrpl12	100	73.846	Maylandia_zebra
ENSDARG00000038768	mrpl12	95	63.102	ENSMAUG00000002006	Mrpl12	94	63.402	Mesocricetus_auratus
ENSDARG00000038768	mrpl12	96	58.511	ENSMICG00000047418	MRPL12	94	59.375	Microcebus_murinus
ENSDARG00000038768	mrpl12	95	62.304	ENSMOCG00000019919	Mrpl12	94	62.694	Microtus_ochrogaster
ENSDARG00000038768	mrpl12	99	73.333	ENSMMOG00000011266	mrpl12	100	72.500	Mola_mola
ENSDARG00000038768	mrpl12	96	57.979	ENSMODG00000002902	MRPL12	94	58.763	Monodelphis_domestica
ENSDARG00000038768	mrpl12	99	75.897	ENSMALG00000001391	mrpl12	100	74.000	Monopterus_albus
ENSDARG00000038768	mrpl12	95	62.827	MGP_CAROLIEiJ_G0017522	Mrpl12	94	63.351	Mus_caroli
ENSDARG00000038768	mrpl12	95	62.827	ENSMUSG00000039640	Mrpl12	94	63.351	Mus_musculus
ENSDARG00000038768	mrpl12	95	61.780	MGP_PahariEiJ_G0018648	Mrpl12	94	62.827	Mus_pahari
ENSDARG00000038768	mrpl12	95	62.827	MGP_SPRETEiJ_G0018366	Mrpl12	94	63.351	Mus_spretus
ENSDARG00000038768	mrpl12	52	62.963	ENSMPUG00000011438	-	64	61.682	Mustela_putorius_furo
ENSDARG00000038768	mrpl12	98	59.799	ENSNGAG00000010189	Mrpl12	97	59.799	Nannospalax_galili
ENSDARG00000038768	mrpl12	99	72.821	ENSNBRG00000020817	mrpl12	100	72.821	Neolamprologus_brichardi
ENSDARG00000038768	mrpl12	95	62.032	ENSNLEG00000035133	MRPL12	93	60.000	Nomascus_leucogenys
ENSDARG00000038768	mrpl12	77	59.091	ENSMEUG00000010783	-	89	59.868	Notamacropus_eugenii
ENSDARG00000038768	mrpl12	98	63.077	ENSODEG00000008765	MRPL12	87	66.857	Octodon_degus
ENSDARG00000038768	mrpl12	68	34.043	ENSOANG00000021537	-	100	34.043	Ornithorhynchus_anatinus
ENSDARG00000038768	mrpl12	99	73.096	ENSORLG00000007092	mrpl12	100	73.096	Oryzias_latipes
ENSDARG00000038768	mrpl12	99	73.096	ENSORLG00020001351	mrpl12	100	73.096	Oryzias_latipes_hni
ENSDARG00000038768	mrpl12	99	74.112	ENSORLG00015012065	mrpl12	100	74.112	Oryzias_latipes_hsok
ENSDARG00000038768	mrpl12	99	74.619	ENSOMEG00000006871	mrpl12	100	74.619	Oryzias_melastigma
ENSDARG00000038768	mrpl12	95	60.209	ENSOGAG00000005297	MRPL12	94	59.896	Otolemur_garnettii
ENSDARG00000038768	mrpl12	93	60.428	ENSOARG00000018221	MRPL12	81	60.428	Ovis_aries
ENSDARG00000038768	mrpl12	88	63.953	ENSPPAG00000042009	MRPL12	93	60.000	Pan_paniscus
ENSDARG00000038768	mrpl12	93	63.043	ENSPPRG00000002570	MRPL12	91	62.703	Panthera_pardus
ENSDARG00000038768	mrpl12	90	62.857	ENSPTIG00000019530	MRPL12	94	60.209	Panthera_tigris_altaica
ENSDARG00000038768	mrpl12	88	63.953	ENSPTRG00000043438	MRPL12	93	60.000	Pan_troglodytes
ENSDARG00000038768	mrpl12	88	62.791	ENSPANG00000019331	MRPL12	93	60.000	Papio_anubis
ENSDARG00000038768	mrpl12	99	68.041	ENSPKIG00000012772	mrpl12	100	66.667	Paramormyrops_kingsleyae
ENSDARG00000038768	mrpl12	74	71.233	ENSPSIG00000018211	MRPL12	88	58.763	Pelodiscus_sinensis
ENSDARG00000038768	mrpl12	99	74.872	ENSPMGG00000008509	mrpl12	100	74.872	Periophthalmus_magnuspinnatus
ENSDARG00000038768	mrpl12	95	62.105	ENSPEMG00000005848	Mrpl12	94	63.918	Peromyscus_maniculatus_bairdii
ENSDARG00000038768	mrpl12	93	56.111	ENSPMAG00000001357	mrpl12	84	58.378	Petromyzon_marinus
ENSDARG00000038768	mrpl12	78	68.831	ENSPCIG00000029585	MRPL12	77	68.590	Phascolarctos_cinereus
ENSDARG00000038768	mrpl12	99	74.872	ENSPFOG00000024338	mrpl12	92	74.872	Poecilia_formosa
ENSDARG00000038768	mrpl12	99	74.872	ENSPLAG00000002664	mrpl12	100	74.872	Poecilia_latipinna
ENSDARG00000038768	mrpl12	99	74.872	ENSPMEG00000021484	mrpl12	100	74.872	Poecilia_mexicana
ENSDARG00000038768	mrpl12	90	74.576	ENSPREG00000004225	mrpl12	95	75.000	Poecilia_reticulata
ENSDARG00000038768	mrpl12	95	62.032	ENSPPYG00000008744	MRPL12	93	60.000	Pongo_abelii
ENSDARG00000038768	mrpl12	95	49.198	ENSPCAG00000015148	MRPL12	93	48.677	Procavia_capensis
ENSDARG00000038768	mrpl12	95	59.893	ENSPCOG00000016998	MRPL12	93	62.105	Propithecus_coquereli
ENSDARG00000038768	mrpl12	84	65.854	ENSPVAG00000011002	MRPL12	83	65.269	Pteropus_vampyrus
ENSDARG00000038768	mrpl12	98	75.258	ENSPNYG00000008879	mrpl12	100	73.958	Pundamilia_nyererei
ENSDARG00000038768	mrpl12	99	73.232	ENSPNAG00000003320	mrpl12	100	75.258	Pygocentrus_nattereri
ENSDARG00000038768	mrpl12	88	62.857	ENSRNOG00000036695	Mrpl12	60	67.456	Rattus_norvegicus
ENSDARG00000038768	mrpl12	88	63.372	ENSRBIG00000029573	MRPL12	93	60.000	Rhinopithecus_bieti
ENSDARG00000038768	mrpl12	88	63.372	ENSRROG00000010180	MRPL12	93	60.000	Rhinopithecus_roxellana
ENSDARG00000038768	mrpl12	70	42.568	YGL068W	-	85	40.936	Saccharomyces_cerevisiae
ENSDARG00000038768	mrpl12	88	62.791	ENSSBOG00000033734	MRPL12	90	61.714	Saimiri_boliviensis_boliviensis
ENSDARG00000038768	mrpl12	100	66.010	ENSSFOG00015023051	mrpl12	100	66.995	Scleropages_formosus
ENSDARG00000038768	mrpl12	99	70.256	ENSSFOG00015023998	mrpl12	100	68.912	Scleropages_formosus
ENSDARG00000038768	mrpl12	99	76.923	ENSSMAG00000001700	mrpl12	100	75.897	Scophthalmus_maximus
ENSDARG00000038768	mrpl12	90	76.705	ENSSDUG00000014547	mrpl12	93	76.705	Seriola_dumerili
ENSDARG00000038768	mrpl12	99	76.531	ENSSLDG00000003829	mrpl12	100	75.385	Seriola_lalandi_dorsalis
ENSDARG00000038768	mrpl12	84	67.665	ENSSPUG00000011062	MRPL12	87	68.263	Sphenodon_punctatus
ENSDARG00000038768	mrpl12	99	75.897	ENSSPAG00000010692	mrpl12	100	75.897	Stegastes_partitus
ENSDARG00000038768	mrpl12	95	59.893	ENSSSCG00000033148	MRPL12	93	62.105	Sus_scrofa
ENSDARG00000038768	mrpl12	78	56.688	ENSTGUG00000003446	MRPL12	98	56.688	Taeniopygia_guttata
ENSDARG00000038768	mrpl12	100	71.429	ENSTRUG00000021764	mrpl12	78	71.642	Takifugu_rubripes
ENSDARG00000038768	mrpl12	100	73.980	ENSTNIG00000010438	mrpl12	95	73.632	Tetraodon_nigroviridis
ENSDARG00000038768	mrpl12	96	61.053	ENSTBEG00000010871	MRPL12	94	59.375	Tupaia_belangeri
ENSDARG00000038768	mrpl12	77	67.550	ENSTTRG00000007611	MRPL12	94	61.458	Tursiops_truncatus
ENSDARG00000038768	mrpl12	96	49.362	ENSUAMG00000016771	MRPL12	95	49.362	Ursus_americanus
ENSDARG00000038768	mrpl12	84	64.848	ENSUMAG00000016332	MRPL12	69	64.912	Ursus_maritimus
ENSDARG00000038768	mrpl12	96	59.788	ENSVVUG00000020000	MRPL12	94	61.979	Vulpes_vulpes
ENSDARG00000038768	mrpl12	99	74.359	ENSXMAG00000028444	mrpl12	100	75.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006390	mitochondrial transcription	21873635.	IBA	Process
GO:0006412	translation	-	IEA	Process