EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000038870 (Gene tree)
Gene ID: 492495
Gene Symbol: slu7
Alias: fc94e11|wu:fc94e11|zgc:103640
Full Name: SLU7 homolog%2C splicing factor
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 14756 bases
Position: chr14:46003973-46018728
Accession: ZDB-GENE-041114-62
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000112935	Slu7	PF11708.8	9.5e-108	1	1
ENSDARP00000116895	Slu7	PF11708.8	2.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000141545	-	552	-	ENSDARP00000116895	184 (aa)	-	F1RBL3
ENSDART00000145241	-	2551	XM_005169611	ENSDARP00000112935	619 (aa)	XP_005169668	F1RCR0

Gene Model

Click here to download ENSDARG00000038870's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000038870's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000038870	slu7	90	78.947	ENSG00000164609	SLU7	97	78.947	Homo_sapiens
ENSDARG00000038870	slu7	92	80.696	ENSAPOG00000011660	slu7	100	81.217	Acanthochromis_polyacanthus
ENSDARG00000038870	slu7	90	77.993	ENSAMEG00000006613	SLU7	97	78.735	Ailuropoda_melanoleuca
ENSDARG00000038870	slu7	100	76.849	ENSACIG00000005652	slu7	100	77.331	Amphilophus_citrinellus
ENSDARG00000038870	slu7	91	80.952	ENSAPEG00000018095	slu7	99	79.189	Amphiprion_percula
ENSDARG00000038870	slu7	92	80.594	ENSATEG00000006357	slu7	100	80.769	Anabas_testudineus
ENSDARG00000038870	slu7	91	77.003	ENSAPLG00000008133	SLU7	98	76.829	Anas_platyrhynchos
ENSDARG00000038870	slu7	93	76.581	ENSACAG00000003144	SLU7	99	76.581	Anolis_carolinensis
ENSDARG00000038870	slu7	90	78.735	ENSANAG00000028320	SLU7	97	78.735	Aotus_nancymaae
ENSDARG00000038870	slu7	92	79.658	ENSACLG00000007273	slu7	100	81.368	Astatotilapia_calliptera
ENSDARG00000038870	slu7	91	84.397	ENSAMXG00000002404	slu7	98	84.574	Astyanax_mexicanus
ENSDARG00000038870	slu7	90	78.521	ENSBTAG00000008457	SLU7	97	78.207	Bos_taurus
ENSDARG00000038870	slu7	69	48.730	WBGene00010629	K07C5.6	64	48.730	Caenorhabditis_elegans
ENSDARG00000038870	slu7	90	79.606	ENSCJAG00000019132	SLU7	97	79.428	Callithrix_jacchus
ENSDARG00000038870	slu7	90	78.559	ENSCAFG00000017268	SLU7	93	76.481	Canis_familiaris
ENSDARG00000038870	slu7	90	78.559	ENSCAFG00020001456	SLU7	93	76.481	Canis_lupus_dingo
ENSDARG00000038870	slu7	90	78.697	ENSCHIG00000013793	SLU7	97	78.383	Capra_hircus
ENSDARG00000038870	slu7	90	78.169	ENSTSYG00000000157	SLU7	97	77.817	Carlito_syrichta
ENSDARG00000038870	slu7	90	73.063	ENSCAPG00000015711	SLU7	97	73.638	Cavia_aperea
ENSDARG00000038870	slu7	90	77.817	ENSCPOG00000004484	SLU7	97	78.383	Cavia_porcellus
ENSDARG00000038870	slu7	90	79.144	ENSCCAG00000035808	SLU7	97	78.735	Cebus_capucinus
ENSDARG00000038870	slu7	90	78.735	ENSCATG00000026140	SLU7	97	78.735	Cercocebus_atys
ENSDARG00000038870	slu7	90	78.383	ENSCLAG00000011915	SLU7	97	78.947	Chinchilla_lanigera
ENSDARG00000038870	slu7	75	79.618	ENSCSAG00000010383	SLU7	96	79.618	Chlorocebus_sabaeus
ENSDARG00000038870	slu7	90	71.429	ENSCHOG00000005055	SLU7	97	71.252	Choloepus_hoffmanni
ENSDARG00000038870	slu7	93	76.804	ENSCPBG00000008047	SLU7	99	76.804	Chrysemys_picta_bellii
ENSDARG00000038870	slu7	69	68.706	ENSCING00000008595	zf(cchc)-12	73	68.910	Ciona_intestinalis
ENSDARG00000038870	slu7	91	41.758	ENSCSAVG00000004927	-	100	52.969	Ciona_savignyi
ENSDARG00000038870	slu7	90	78.735	ENSCANG00000003257	SLU7	97	78.735	Colobus_angolensis_palliatus
ENSDARG00000038870	slu7	90	78.660	ENSCGRG00001016416	Slu7	97	78.660	Cricetulus_griseus_chok1gshd
ENSDARG00000038870	slu7	75	68.269	ENSCGRG00001022223	-	90	68.182	Cricetulus_griseus_chok1gshd
ENSDARG00000038870	slu7	90	78.307	ENSCGRG00000005164	Slu7	97	78.307	Cricetulus_griseus_crigri
ENSDARG00000038870	slu7	75	68.510	ENSCGRG00000008655	-	90	68.421	Cricetulus_griseus_crigri
ENSDARG00000038870	slu7	92	78.397	ENSCSEG00000015522	slu7	99	78.883	Cynoglossus_semilaevis
ENSDARG00000038870	slu7	92	80.139	ENSCVAG00000019302	slu7	100	78.397	Cyprinodon_variegatus
ENSDARG00000038870	slu7	94	76.871	ENSDNOG00000048745	SLU7	100	76.701	Dasypus_novemcinctus
ENSDARG00000038870	slu7	90	70.194	ENSDORG00000006239	-	89	81.517	Dipodomys_ordii
ENSDARG00000038870	slu7	87	66.974	ENSDORG00000025365	-	99	68.635	Dipodomys_ordii
ENSDARG00000038870	slu7	69	60.093	FBgn0039626	Slu7	71	60.093	Drosophila_melanogaster
ENSDARG00000038870	slu7	79	58.233	ENSETEG00000002993	-	99	63.063	Echinops_telfairi
ENSDARG00000038870	slu7	84	77.358	ENSETEG00000014798	-	100	77.170	Echinops_telfairi
ENSDARG00000038870	slu7	91	63.415	ENSEBUG00000003656	slu7	89	62.718	Eptatretus_burgeri
ENSDARG00000038870	slu7	90	78.421	ENSEASG00005000613	SLU7	97	78.596	Equus_asinus_asinus
ENSDARG00000038870	slu7	90	78.559	ENSECAG00000013696	SLU7	97	78.559	Equus_caballus
ENSDARG00000038870	slu7	54	82.906	ENSEEUG00000006300	-	57	82.906	Erinaceus_europaeus
ENSDARG00000038870	slu7	92	79.965	ENSELUG00000022607	slu7	99	79.102	Esox_lucius
ENSDARG00000038870	slu7	90	78.345	ENSFCAG00000011152	SLU7	97	78.910	Felis_catus
ENSDARG00000038870	slu7	90	78.660	ENSFALG00000013473	-	97	78.836	Ficedula_albicollis
ENSDARG00000038870	slu7	60	76.762	ENSFALG00000014860	-	94	76.762	Ficedula_albicollis
ENSDARG00000038870	slu7	90	78.483	ENSFDAG00000003906	SLU7	97	78.483	Fukomys_damarensis
ENSDARG00000038870	slu7	92	81.010	ENSFHEG00000012789	slu7	100	79.094	Fundulus_heteroclitus
ENSDARG00000038870	slu7	92	71.880	ENSGMOG00000016207	slu7	100	73.286	Gadus_morhua
ENSDARG00000038870	slu7	99	74.020	ENSGALG00000034414	SLU7	90	74.183	Gallus_gallus
ENSDARG00000038870	slu7	92	81.152	ENSGAFG00000007953	slu7	100	80.035	Gambusia_affinis
ENSDARG00000038870	slu7	92	75.567	ENSGACG00000018144	slu7	100	75.306	Gasterosteus_aculeatus
ENSDARG00000038870	slu7	93	76.976	ENSGAGG00000008256	SLU7	99	76.976	Gopherus_agassizii
ENSDARG00000038870	slu7	90	79.359	ENSGGOG00000005591	SLU7	97	79.359	Gorilla_gorilla
ENSDARG00000038870	slu7	78	85.484	ENSHBUG00000002296	slu7	93	87.327	Haplochromis_burtoni
ENSDARG00000038870	slu7	90	78.660	ENSHGLG00000009442	-	97	78.660	Heterocephalus_glaber_female
ENSDARG00000038870	slu7	71	70.288	ENSHGLG00000008195	-	86	70.288	Heterocephalus_glaber_female
ENSDARG00000038870	slu7	90	78.660	ENSHGLG00100008080	-	97	78.660	Heterocephalus_glaber_male
ENSDARG00000038870	slu7	91	80.600	ENSHCOG00000003110	slu7	98	80.952	Hippocampus_comes
ENSDARG00000038870	slu7	93	84.174	ENSIPUG00000017949	slu7	100	83.826	Ictalurus_punctatus
ENSDARG00000038870	slu7	91	67.059	ENSSTOG00000015057	SLU7	98	75.000	Ictidomys_tridecemlineatus
ENSDARG00000038870	slu7	90	79.225	ENSJJAG00000011452	Slu7	97	79.225	Jaculus_jaculus
ENSDARG00000038870	slu7	92	81.010	ENSKMAG00000005625	slu7	99	79.443	Kryptolebias_marmoratus
ENSDARG00000038870	slu7	92	79.581	ENSLBEG00000004903	slu7	100	77.836	Labrus_bergylta
ENSDARG00000038870	slu7	92	79.688	ENSLACG00000010170	SLU7	98	79.688	Latimeria_chalumnae
ENSDARG00000038870	slu7	92	83.074	ENSLOCG00000009410	slu7	99	82.902	Lepisosteus_oculatus
ENSDARG00000038870	slu7	90	78.521	ENSLAFG00000003725	SLU7	97	78.521	Loxodonta_africana
ENSDARG00000038870	slu7	90	78.735	ENSMFAG00000002001	SLU7	97	78.735	Macaca_fascicularis
ENSDARG00000038870	slu7	90	79.323	ENSMMUG00000023075	SLU7	97	79.323	Macaca_mulatta
ENSDARG00000038870	slu7	90	78.735	ENSMNEG00000029132	SLU7	97	78.735	Macaca_nemestrina
ENSDARG00000038870	slu7	90	78.735	ENSMLEG00000037647	SLU7	97	78.735	Mandrillus_leucophaeus
ENSDARG00000038870	slu7	92	78.683	ENSMAMG00000008387	slu7	100	77.643	Mastacembelus_armatus
ENSDARG00000038870	slu7	100	76.490	ENSMZEG00005012180	slu7	100	80.803	Maylandia_zebra
ENSDARG00000038870	slu7	92	77.972	ENSMGAG00000002882	SLU7	99	78.147	Meleagris_gallopavo
ENSDARG00000038870	slu7	90	78.345	ENSMAUG00000016739	Slu7	97	78.697	Mesocricetus_auratus
ENSDARG00000038870	slu7	90	78.169	ENSMICG00000031781	SLU7	97	77.856	Microcebus_murinus
ENSDARG00000038870	slu7	90	79.189	ENSMOCG00000012963	Slu7	97	79.189	Microtus_ochrogaster
ENSDARG00000038870	slu7	92	79.652	ENSMMOG00000004203	slu7	99	79.826	Mola_mola
ENSDARG00000038870	slu7	97	57.692	ENSMMOG00000005988	-	74	85.075	Mola_mola
ENSDARG00000038870	slu7	93	77.320	ENSMODG00000007968	SLU7	94	77.320	Monodelphis_domestica
ENSDARG00000038870	slu7	92	78.497	ENSMALG00000004247	slu7	100	78.497	Monopterus_albus
ENSDARG00000038870	slu7	90	78.660	MGP_CAROLIEiJ_G0016222	Slu7	97	78.660	Mus_caroli
ENSDARG00000038870	slu7	90	78.459	ENSMUSG00000020409	Slu7	97	78.459	Mus_musculus
ENSDARG00000038870	slu7	90	78.836	MGP_PahariEiJ_G0017358	Slu7	97	78.836	Mus_pahari
ENSDARG00000038870	slu7	90	78.660	MGP_SPRETEiJ_G0017063	Slu7	97	78.660	Mus_spretus
ENSDARG00000038870	slu7	90	78.169	ENSMPUG00000013264	SLU7	93	76.650	Mustela_putorius_furo
ENSDARG00000038870	slu7	90	78.697	ENSMLUG00000003091	SLU7	97	79.262	Myotis_lucifugus
ENSDARG00000038870	slu7	90	79.189	ENSNGAG00000015167	Slu7	97	79.189	Nannospalax_galili
ENSDARG00000038870	slu7	90	78.393	ENSNLEG00000004355	SLU7	97	78.966	Nomascus_leucogenys
ENSDARG00000038870	slu7	90	73.016	ENSMEUG00000010577	SLU7	97	73.016	Notamacropus_eugenii
ENSDARG00000038870	slu7	90	73.768	ENSOPRG00000004538	SLU7	97	73.415	Ochotona_princeps
ENSDARG00000038870	slu7	90	71.605	ENSODEG00000005892	-	88	83.500	Octodon_degus
ENSDARG00000038870	slu7	90	78.169	ENSODEG00000010998	-	97	78.735	Octodon_degus
ENSDARG00000038870	slu7	92	82.548	ENSONIG00000012957	slu7	100	82.897	Oreochromis_niloticus
ENSDARG00000038870	slu7	92	62.353	ENSOANG00000012329	-	99	73.107	Ornithorhynchus_anatinus
ENSDARG00000038870	slu7	50	82.222	ENSOANG00000008090	-	94	82.484	Ornithorhynchus_anatinus
ENSDARG00000038870	slu7	90	78.131	ENSOCUG00000011743	SLU7	97	77.954	Oryctolagus_cuniculus
ENSDARG00000038870	slu7	93	79.483	ENSORLG00000005505	slu7	97	80.628	Oryzias_latipes
ENSDARG00000038870	slu7	92	80.594	ENSORLG00020011665	slu7	99	80.944	Oryzias_latipes_hni
ENSDARG00000038870	slu7	92	80.594	ENSORLG00015002040	slu7	99	80.944	Oryzias_latipes_hsok
ENSDARG00000038870	slu7	92	80.279	ENSOMEG00000006235	slu7	99	80.628	Oryzias_melastigma
ENSDARG00000038870	slu7	90	78.735	ENSOGAG00000012301	SLU7	97	78.735	Otolemur_garnettii
ENSDARG00000038870	slu7	90	77.993	ENSOARG00000013468	SLU7	97	77.856	Ovis_aries
ENSDARG00000038870	slu7	90	79.359	ENSPPAG00000032717	SLU7	97	79.359	Pan_paniscus
ENSDARG00000038870	slu7	90	78.345	ENSPPRG00000013856	SLU7	97	78.910	Panthera_pardus
ENSDARG00000038870	slu7	90	78.345	ENSPTIG00000005434	SLU7	97	78.910	Panthera_tigris_altaica
ENSDARG00000038870	slu7	90	78.610	ENSPTRG00000017491	SLU7	97	79.359	Pan_troglodytes
ENSDARG00000038870	slu7	90	78.836	ENSPANG00000006850	SLU7	97	78.836	Papio_anubis
ENSDARG00000038870	slu7	91	82.692	ENSPKIG00000009367	slu7	99	83.566	Paramormyrops_kingsleyae
ENSDARG00000038870	slu7	93	75.468	ENSPSIG00000011216	SLU7	99	75.468	Pelodiscus_sinensis
ENSDARG00000038870	slu7	92	76.923	ENSPMGG00000015695	slu7	99	75.524	Periophthalmus_magnuspinnatus
ENSDARG00000038870	slu7	90	78.836	ENSPEMG00000016646	-	97	78.836	Peromyscus_maniculatus_bairdii
ENSDARG00000038870	slu7	90	62.434	ENSPEMG00000000564	-	97	63.139	Peromyscus_maniculatus_bairdii
ENSDARG00000038870	slu7	90	77.601	ENSPCIG00000018111	SLU7	97	77.425	Phascolarctos_cinereus
ENSDARG00000038870	slu7	92	80.662	ENSPFOG00000009050	slu7	100	79.791	Poecilia_formosa
ENSDARG00000038870	slu7	92	80.348	ENSPLAG00000005330	slu7	100	79.652	Poecilia_latipinna
ENSDARG00000038870	slu7	92	80.662	ENSPMEG00000024369	slu7	100	79.791	Poecilia_mexicana
ENSDARG00000038870	slu7	92	78.109	ENSPREG00000004355	slu7	100	78.010	Poecilia_reticulata
ENSDARG00000038870	slu7	90	78.735	ENSPPYG00000016008	SLU7	97	78.735	Pongo_abelii
ENSDARG00000038870	slu7	70	80.769	ENSPCAG00000003323	SLU7	82	80.769	Procavia_capensis
ENSDARG00000038870	slu7	90	75.714	ENSPCOG00000016138	SLU7	97	75.401	Propithecus_coquereli
ENSDARG00000038870	slu7	72	86.517	ENSPVAG00000015935	SLU7	76	86.517	Pteropus_vampyrus
ENSDARG00000038870	slu7	100	74.313	ENSPNYG00000000289	slu7	100	80.803	Pundamilia_nyererei
ENSDARG00000038870	slu7	92	73.373	ENSPNYG00000024087	-	97	70.819	Pundamilia_nyererei
ENSDARG00000038870	slu7	91	85.461	ENSPNAG00000006885	slu7	98	85.993	Pygocentrus_nattereri
ENSDARG00000038870	slu7	90	78.345	ENSRNOG00000003822	Slu7	97	78.697	Rattus_norvegicus
ENSDARG00000038870	slu7	90	77.329	ENSRBIG00000021391	SLU7	97	77.153	Rhinopithecus_bieti
ENSDARG00000038870	slu7	90	78.735	ENSRROG00000008930	SLU7	97	78.735	Rhinopithecus_roxellana
ENSDARG00000038870	slu7	90	79.144	ENSSBOG00000003225	SLU7	97	79.144	Saimiri_boliviensis_boliviensis
ENSDARG00000038870	slu7	90	73.393	ENSSHAG00000007807	-	97	73.036	Sarcophilus_harrisii
ENSDARG00000038870	slu7	93	77.663	ENSSHAG00000009841	-	99	77.663	Sarcophilus_harrisii
ENSDARG00000038870	slu7	91	83.652	ENSSFOG00015015923	slu7	98	83.304	Scleropages_formosus
ENSDARG00000038870	slu7	91	78.836	ENSSMAG00000004281	slu7	98	79.541	Scophthalmus_maximus
ENSDARG00000038870	slu7	92	79.965	ENSSDUG00000005127	slu7	100	79.965	Seriola_dumerili
ENSDARG00000038870	slu7	92	80.314	ENSSLDG00000014353	slu7	100	80.314	Seriola_lalandi_dorsalis
ENSDARG00000038870	slu7	92	71.652	ENSSARG00000014137	-	99	71.130	Sorex_araneus
ENSDARG00000038870	slu7	85	70.686	ENSSARG00000014506	-	99	70.501	Sorex_araneus
ENSDARG00000038870	slu7	66	75.000	ENSSARG00000006390	-	99	75.000	Sorex_araneus
ENSDARG00000038870	slu7	92	69.550	ENSSARG00000001869	-	99	69.377	Sorex_araneus
ENSDARG00000038870	slu7	74	74.145	ENSSARG00000014128	-	99	74.145	Sorex_araneus
ENSDARG00000038870	slu7	92	71.130	ENSSARG00000014139	-	99	70.957	Sorex_araneus
ENSDARG00000038870	slu7	89	55.215	ENSSARG00000006540	-	100	66.292	Sorex_araneus
ENSDARG00000038870	slu7	91	65.476	ENSSARG00000012209	-	100	64.334	Sorex_araneus
ENSDARG00000038870	slu7	92	70.957	ENSSARG00000006902	-	99	71.130	Sorex_araneus
ENSDARG00000038870	slu7	90	76.626	ENSSPUG00000000666	SLU7	96	76.626	Sphenodon_punctatus
ENSDARG00000038870	slu7	91	81.206	ENSSPAG00000014100	slu7	98	79.196	Stegastes_partitus
ENSDARG00000038870	slu7	90	78.873	ENSSSCG00000017033	SLU7	97	78.559	Sus_scrofa
ENSDARG00000038870	slu7	92	77.682	ENSTGUG00000001410	SLU7	99	77.453	Taeniopygia_guttata
ENSDARG00000038870	slu7	92	77.217	ENSTRUG00000001335	slu7	100	75.478	Takifugu_rubripes
ENSDARG00000038870	slu7	92	76.460	ENSTNIG00000009677	slu7	100	76.667	Tetraodon_nigroviridis
ENSDARG00000038870	slu7	91	65.476	ENSTBEG00000015604	SLU7	97	65.961	Tupaia_belangeri
ENSDARG00000038870	slu7	84	76.371	ENSTTRG00000011575	SLU7	100	76.371	Tursiops_truncatus
ENSDARG00000038870	slu7	90	78.345	ENSUMAG00000000110	SLU7	92	76.819	Ursus_maritimus
ENSDARG00000038870	slu7	90	78.131	ENSVPAG00000009595	SLU7	97	77.778	Vicugna_pacos
ENSDARG00000038870	slu7	90	78.559	ENSVVUG00000003989	SLU7	93	76.481	Vulpes_vulpes
ENSDARG00000038870	slu7	92	73.928	ENSXETG00000016536	slu7	97	75.693	Xenopus_tropicalis
ENSDARG00000038870	slu7	92	78.883	ENSXCOG00000004207	slu7	100	77.312	Xiphophorus_couchianus
ENSDARG00000038870	slu7	92	80.139	ENSXMAG00000009007	slu7	100	78.571	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000386	second spliceosomal transesterification activity	21873635.	IBA	Function
GO:0000386	second spliceosomal transesterification activity	-	IEA	Function
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0030628	pre-mRNA 3'-splice site binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function