EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000039263 (Gene tree)
Gene ID: 567773
Gene Symbol: zbtb48
Alias: fd07a08|wu:fd07a08|wu:fe16d08
Full Name: zinc finger and BTB domain containing 48
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 13857 bases
Position: chr23:24941299-24955155
Accession: ZDB-GENE-030131-4450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000114087	zf-C2H2	PF00096.26	1.9e-32	1	4
ENSDARP00000114087	zf-C2H2	PF00096.26	1.9e-32	2	4
ENSDARP00000114087	zf-C2H2	PF00096.26	1.9e-32	3	4
ENSDARP00000114087	zf-C2H2	PF00096.26	1.9e-32	4	4
ENSDARP00000156174	zf-C2H2	PF00096.26	5.2e-10	1	1
ENSDARP00000114087	zf-met	PF12874.7	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000136347	-	845	-	ENSDARP00000116357	241 (aa)	-	E9QBS9
ENSDART00000192085	-	1470	-	ENSDARP00000156174	489 (aa)	-	A0A2R8RYS6
ENSDART00000144903	-	2572	XM_691074	ENSDARP00000114087	760 (aa)	XP_696166	E7FDZ5

Gene Model

Click here to download ENSDARG00000039263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000039263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000039263	zbtb48	63	75.918	ENSAPOG00000002861	zbtb48	93	75.918	Acanthochromis_polyacanthus
ENSDARG00000039263	zbtb48	87	59.819	ENSAOCG00000008304	zbtb48	79	66.667	Amphiprion_ocellaris
ENSDARG00000039263	zbtb48	97	52.387	ENSATEG00000024413	zbtb48	96	52.763	Anabas_testudineus
ENSDARG00000039263	zbtb48	85	53.528	ENSCAPG00000012228	ZBTB48	94	52.640	Cavia_aperea
ENSDARG00000039263	zbtb48	89	53.226	ENSDORG00000009677	Zbtb48	54	76.676	Dipodomys_ordii
ENSDARG00000039263	zbtb48	57	68.349	ENSFALG00000009796	ZBTB48	88	66.667	Ficedula_albicollis
ENSDARG00000039263	zbtb48	56	85.667	ENSGALG00000000637	ZBTB48	75	83.492	Gallus_gallus
ENSDARG00000039263	zbtb48	85	54.141	ENSGACG00000011187	zbtb48	99	55.590	Gasterosteus_aculeatus
ENSDARG00000039263	zbtb48	87	55.022	ENSKMAG00000002963	zbtb48	88	54.694	Kryptolebias_marmoratus
ENSDARG00000039263	zbtb48	67	63.158	ENSLBEG00000012151	zbtb48	80	65.026	Labrus_bergylta
ENSDARG00000039263	zbtb48	56	70.327	ENSMGAG00000001275	ZBTB48	98	69.606	Meleagris_gallopavo
ENSDARG00000039263	zbtb48	72	65.046	ENSMMOG00000014996	zbtb48	85	66.908	Mola_mola
ENSDARG00000039263	zbtb48	88	52.226	ENSORLG00000019331	zbtb48	98	51.694	Oryzias_latipes
ENSDARG00000039263	zbtb48	75	59.465	ENSORLG00020007790	zbtb48	90	63.119	Oryzias_latipes_hni
ENSDARG00000039263	zbtb48	73	57.834	ENSORLG00015002568	zbtb48	97	59.951	Oryzias_latipes_hsok
ENSDARG00000039263	zbtb48	88	52.444	ENSOMEG00000017762	zbtb48	96	52.741	Oryzias_melastigma
ENSDARG00000039263	zbtb48	97	41.753	ENSPMGG00000019913	zbtb48	52	65.439	Periophthalmus_magnuspinnatus
ENSDARG00000039263	zbtb48	97	53.222	ENSSDUG00000004449	zbtb48	96	53.665	Seriola_dumerili
ENSDARG00000039263	zbtb48	96	43.775	ENSSLDG00000017718	zbtb48	87	72.021	Seriola_lalandi_dorsalis
ENSDARG00000039263	zbtb48	76	66.497	ENSSPUG00000011853	ZBTB48	94	66.497	Sphenodon_punctatus
ENSDARG00000039263	zbtb48	57	68.119	ENSTGUG00000002589	ZBTB48	83	68.119	Taeniopygia_guttata
ENSDARG00000039263	zbtb48	90	54.326	ENSTRUG00000008615	zbtb48	92	54.468	Takifugu_rubripes
ENSDARG00000039263	zbtb48	85	54.436	ENSTNIG00000012449	zbtb48	99	55.015	Tetraodon_nigroviridis
ENSDARG00000039263	zbtb48	78	54.754	ENSTBEG00000014014	ZBTB48	55	78.212	Tupaia_belangeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function