EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000039266 (Gene tree)
Gene ID: -
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA binding motif protein 25a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 25353 bases
Position: chr13:32997020-33022372
Accession: ZDB-GENE-090312-142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000112585	RRM_1	PF00076.22	9.4e-10	1	1
ENSDARP00000119393	PWI	PF01480.17	4.2e-15	1	1
ENSDARP00000156592	PWI	PF01480.17	8e-09	1	1
ENSDARP00000145251	PWI	PF01480.17	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000133677	-	896	-	ENSDARP00000119393	80 (aa)	-	F1R4H4
ENSDART00000147165	-	723	-	ENSDARP00000112585	178 (aa)	-	B8A543
ENSDART00000141140	-	729	-	-	- (aa)	-	-
ENSDART00000134140	-	1040	-	ENSDARP00000112834	347 (aa)	-	F1RE74
ENSDART00000183671	-	1352	-	ENSDARP00000145251	361 (aa)	-	A0A2R8Q379
ENSDART00000179859	-	1254	XM_009307431	ENSDARP00000156592	417 (aa)	XP_009305706	A0A2R8QMA2

Gene Model

Click here to download ENSDARG00000039266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000039266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000039266	rbm25a	99	92.405	ENSDARG00000006395	rbm25b	59	64.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000039266	rbm25a	98	94.872	ENSG00000119707	RBM25	100	58.015	Homo_sapiens
ENSDARG00000039266	rbm25a	99	97.468	ENSAPOG00000017757	rbm25a	54	70.773	Acanthochromis_polyacanthus
ENSDARG00000039266	rbm25a	99	92.405	ENSAPOG00000015321	rbm25b	54	66.210	Acanthochromis_polyacanthus
ENSDARG00000039266	rbm25a	99	94.937	ENSACIG00000014178	rbm25b	53	61.187	Amphilophus_citrinellus
ENSDARG00000039266	rbm25a	99	97.468	ENSACIG00000019482	rbm25a	53	66.895	Amphilophus_citrinellus
ENSDARG00000039266	rbm25a	99	92.405	ENSAOCG00000019308	rbm25b	53	66.828	Amphiprion_ocellaris
ENSDARG00000039266	rbm25a	99	97.468	ENSAOCG00000013695	rbm25a	52	72.482	Amphiprion_ocellaris
ENSDARG00000039266	rbm25a	99	92.405	ENSAPEG00000009666	rbm25b	56	65.904	Amphiprion_percula
ENSDARG00000039266	rbm25a	99	97.468	ENSAPEG00000007514	rbm25a	52	72.482	Amphiprion_percula
ENSDARG00000039266	rbm25a	98	97.436	ENSATEG00000020676	rbm25a	75	55.760	Anabas_testudineus
ENSDARG00000039266	rbm25a	99	92.405	ENSATEG00000017312	rbm25b	54	69.193	Anabas_testudineus
ENSDARG00000039266	rbm25a	99	94.937	ENSAPLG00000006643	RBM25	51	73.201	Anas_platyrhynchos
ENSDARG00000039266	rbm25a	98	94.872	ENSANAG00000028295	RBM25	61	64.674	Aotus_nancymaae
ENSDARG00000039266	rbm25a	99	93.671	ENSACLG00000024359	rbm25b	54	65.753	Astatotilapia_calliptera
ENSDARG00000039266	rbm25a	99	98.734	ENSACLG00000027482	rbm25a	53	71.394	Astatotilapia_calliptera
ENSDARG00000039266	rbm25a	99	93.671	ENSAMXG00000024525	rbm25b	52	66.667	Astyanax_mexicanus
ENSDARG00000039266	rbm25a	95	48.684	WBGene00012245	W04D2.6	78	34.146	Caenorhabditis_elegans
ENSDARG00000039266	rbm25a	98	94.872	ENSCJAG00000014441	-	61	64.674	Callithrix_jacchus
ENSDARG00000039266	rbm25a	98	89.744	ENSCJAG00000046744	-	100	68.715	Callithrix_jacchus
ENSDARG00000039266	rbm25a	81	68.493	ENSCAFG00000016809	-	67	65.753	Canis_familiaris
ENSDARG00000039266	rbm25a	98	94.872	ENSCHIG00000021190	-	99	71.229	Capra_hircus
ENSDARG00000039266	rbm25a	98	94.872	ENSTSYG00000003024	RBM25	61	64.674	Carlito_syrichta
ENSDARG00000039266	rbm25a	98	94.872	ENSCATG00000039651	RBM25	61	64.674	Cercocebus_atys
ENSDARG00000039266	rbm25a	100	66.848	ENSCANG00000043874	RBM25	61	64.674	Colobus_angolensis_palliatus
ENSDARG00000039266	rbm25a	99	93.671	ENSCSEG00000020737	rbm25b	51	68.000	Cynoglossus_semilaevis
ENSDARG00000039266	rbm25a	99	97.468	ENSCSEG00000009430	rbm25a	54	64.465	Cynoglossus_semilaevis
ENSDARG00000039266	rbm25a	99	94.937	ENSCVAG00000005498	rbm25a	99	68.956	Cyprinodon_variegatus
ENSDARG00000039266	rbm25a	99	92.405	ENSCVAG00000003478	rbm25b	53	61.503	Cyprinodon_variegatus
ENSDARG00000039266	rbm25a	98	94.872	ENSEASG00005004743	-	100	68.025	Equus_asinus_asinus
ENSDARG00000039266	rbm25a	98	94.872	ENSECAG00000013395	RBM25	100	68.025	Equus_caballus
ENSDARG00000039266	rbm25a	99	97.468	ENSELUG00000007730	rbm25b	51	83.212	Esox_lucius
ENSDARG00000039266	rbm25a	98	94.872	ENSFCAG00000011716	RBM25	61	64.674	Felis_catus
ENSDARG00000039266	rbm25a	99	92.405	ENSFHEG00000003513	rbm25b	54	64.920	Fundulus_heteroclitus
ENSDARG00000039266	rbm25a	99	89.873	ENSGMOG00000014097	rbm25b	55	60.934	Gadus_morhua
ENSDARG00000039266	rbm25a	99	98.734	ENSGMOG00000014070	rbm25a	55	68.106	Gadus_morhua
ENSDARG00000039266	rbm25a	99	94.937	ENSGALG00000009332	-	99	71.508	Gallus_gallus
ENSDARG00000039266	rbm25a	99	93.671	ENSGAFG00000018036	rbm25a	51	69.438	Gambusia_affinis
ENSDARG00000039266	rbm25a	99	92.405	ENSGAFG00000001092	rbm25b	50	60.817	Gambusia_affinis
ENSDARG00000039266	rbm25a	98	94.872	ENSGGOG00000002415	RBM25	61	64.674	Gorilla_gorilla
ENSDARG00000039266	rbm25a	99	93.671	ENSHBUG00000018499	rbm25b	53	65.982	Haplochromis_burtoni
ENSDARG00000039266	rbm25a	99	98.734	ENSHBUG00000016908	rbm25a	50	71.394	Haplochromis_burtoni
ENSDARG00000039266	rbm25a	98	94.872	ENSHGLG00100018236	-	92	64.674	Heterocephalus_glaber_male
ENSDARG00000039266	rbm25a	99	87.342	ENSHCOG00000000142	rbm25b	52	68.227	Hippocampus_comes
ENSDARG00000039266	rbm25a	99	93.671	ENSHCOG00000018433	rbm25a	99	88.889	Hippocampus_comes
ENSDARG00000039266	rbm25a	99	93.671	ENSIPUG00000021051	rbm25b	51	70.270	Ictalurus_punctatus
ENSDARG00000039266	rbm25a	99	92.405	ENSKMAG00000018826	rbm25b	53	65.982	Kryptolebias_marmoratus
ENSDARG00000039266	rbm25a	99	94.937	ENSKMAG00000016242	rbm25a	55	88.462	Kryptolebias_marmoratus
ENSDARG00000039266	rbm25a	98	92.308	ENSLBEG00000010667	rbm25b	51	70.545	Labrus_bergylta
ENSDARG00000039266	rbm25a	99	93.671	ENSLOCG00000014196	rbm25b	51	71.290	Lepisosteus_oculatus
ENSDARG00000039266	rbm25a	98	94.872	ENSMFAG00000040040	RBM25	61	64.674	Macaca_fascicularis
ENSDARG00000039266	rbm25a	98	94.872	ENSMMUG00000002332	RBM25	98	71.229	Macaca_mulatta
ENSDARG00000039266	rbm25a	98	94.872	ENSMLEG00000035157	RBM25	61	64.674	Mandrillus_leucophaeus
ENSDARG00000039266	rbm25a	98	96.154	ENSMAMG00000000165	rbm25a	51	69.598	Mastacembelus_armatus
ENSDARG00000039266	rbm25a	99	92.405	ENSMAMG00000004524	rbm25b	55	61.607	Mastacembelus_armatus
ENSDARG00000039266	rbm25a	99	93.671	ENSMZEG00005001453	rbm25b	54	65.753	Maylandia_zebra
ENSDARG00000039266	rbm25a	99	98.734	ENSMZEG00005011183	rbm25a	53	71.394	Maylandia_zebra
ENSDARG00000039266	rbm25a	84	88.060	ENSMAUG00000017751	-	92	69.164	Mesocricetus_auratus
ENSDARG00000039266	rbm25a	98	94.872	ENSMICG00000034082	RBM25	61	64.674	Microcebus_murinus
ENSDARG00000039266	rbm25a	99	96.203	ENSMMOG00000009065	rbm25a	52	70.944	Mola_mola
ENSDARG00000039266	rbm25a	99	92.405	ENSMMOG00000015545	rbm25b	59	65.525	Mola_mola
ENSDARG00000039266	rbm25a	98	92.308	ENSMALG00000020441	rbm25b	83	65.682	Monopterus_albus
ENSDARG00000039266	rbm25a	98	97.436	ENSMALG00000020459	rbm25a	89	64.962	Monopterus_albus
ENSDARG00000039266	rbm25a	98	94.872	MGP_CAROLIEiJ_G0017921	Rbm25	91	65.193	Mus_caroli
ENSDARG00000039266	rbm25a	98	94.872	ENSMUSG00000010608	Rbm25	91	65.193	Mus_musculus
ENSDARG00000039266	rbm25a	98	94.872	MGP_PahariEiJ_G0029677	Rbm25	91	65.193	Mus_pahari
ENSDARG00000039266	rbm25a	98	94.872	MGP_SPRETEiJ_G0018766	-	91	65.193	Mus_spretus
ENSDARG00000039266	rbm25a	98	94.872	ENSMPUG00000003698	RBM25	53	72.705	Mustela_putorius_furo
ENSDARG00000039266	rbm25a	99	98.734	ENSNBRG00000003761	rbm25a	56	65.668	Neolamprologus_brichardi
ENSDARG00000039266	rbm25a	99	77.215	ENSNBRG00000022192	rbm25b	52	62.850	Neolamprologus_brichardi
ENSDARG00000039266	rbm25a	98	94.872	ENSNLEG00000002701	RBM25	61	64.674	Nomascus_leucogenys
ENSDARG00000039266	rbm25a	98	94.872	ENSORLG00000011874	rbm25b	53	64.302	Oryzias_latipes
ENSDARG00000039266	rbm25a	73	75.940	ENSORLG00000024690	-	100	72.932	Oryzias_latipes
ENSDARG00000039266	rbm25a	98	97.436	ENSORLG00000009958	rbm25a	100	68.524	Oryzias_latipes
ENSDARG00000039266	rbm25a	99	96.203	ENSORLG00020016422	rbm25b	50	69.750	Oryzias_latipes_hni
ENSDARG00000039266	rbm25a	98	94.872	ENSORLG00015011269	rbm25b	53	63.844	Oryzias_latipes_hsok
ENSDARG00000039266	rbm25a	99	94.937	ENSOMEG00000023172	rbm25b	53	64.073	Oryzias_melastigma
ENSDARG00000039266	rbm25a	98	94.872	ENSPPAG00000039402	RBM25	61	64.674	Pan_paniscus
ENSDARG00000039266	rbm25a	98	94.872	ENSPPRG00000017374	RBM25	61	64.674	Panthera_pardus
ENSDARG00000039266	rbm25a	98	94.872	ENSPTIG00000017309	RBM25	61	64.674	Panthera_tigris_altaica
ENSDARG00000039266	rbm25a	98	94.872	ENSPTRG00000006509	RBM25	61	64.674	Pan_troglodytes
ENSDARG00000039266	rbm25a	98	94.872	ENSPANG00000018212	RBM25	61	64.674	Papio_anubis
ENSDARG00000039266	rbm25a	99	97.468	ENSPKIG00000003203	rbm25b	53	70.345	Paramormyrops_kingsleyae
ENSDARG00000039266	rbm25a	98	94.872	ENSPMGG00000015740	rbm25b	54	60.317	Periophthalmus_magnuspinnatus
ENSDARG00000039266	rbm25a	99	81.013	ENSPMGG00000001791	rbm25a	99	63.570	Periophthalmus_magnuspinnatus
ENSDARG00000039266	rbm25a	98	94.872	ENSPEMG00000008001	-	100	68.025	Peromyscus_maniculatus_bairdii
ENSDARG00000039266	rbm25a	99	92.405	ENSPFOG00000018808	rbm25b	53	63.739	Poecilia_formosa
ENSDARG00000039266	rbm25a	99	96.203	ENSPLAG00000018338	rbm25a	52	70.416	Poecilia_latipinna
ENSDARG00000039266	rbm25a	99	92.405	ENSPLAG00000000100	rbm25b	100	65.217	Poecilia_latipinna
ENSDARG00000039266	rbm25a	99	96.203	ENSPMEG00000024470	rbm25a	51	70.416	Poecilia_mexicana
ENSDARG00000039266	rbm25a	99	92.405	ENSPMEG00000019161	rbm25b	55	60.870	Poecilia_mexicana
ENSDARG00000039266	rbm25a	99	92.405	ENSPMEG00000012262	rbm25b	100	65.217	Poecilia_mexicana
ENSDARG00000039266	rbm25a	99	92.405	ENSPREG00000008522	rbm25b	54	61.435	Poecilia_reticulata
ENSDARG00000039266	rbm25a	99	96.203	ENSPREG00000009228	rbm25a	52	70.073	Poecilia_reticulata
ENSDARG00000039266	rbm25a	98	94.872	ENSPCOG00000023107	RBM25	61	64.674	Propithecus_coquereli
ENSDARG00000039266	rbm25a	99	78.481	ENSPNYG00000023303	rbm25b	52	62.617	Pundamilia_nyererei
ENSDARG00000039266	rbm25a	99	98.734	ENSPNYG00000022596	rbm25a	51	71.394	Pundamilia_nyererei
ENSDARG00000039266	rbm25a	99	93.671	ENSPNAG00000012024	rbm25b	53	67.053	Pygocentrus_nattereri
ENSDARG00000039266	rbm25a	98	94.872	ENSRBIG00000039904	RBM25	61	64.674	Rhinopithecus_bieti
ENSDARG00000039266	rbm25a	98	94.872	ENSRROG00000035556	RBM25	97	71.229	Rhinopithecus_roxellana
ENSDARG00000039266	rbm25a	99	97.468	ENSSFOG00015007093	rbm25	54	68.650	Scleropages_formosus
ENSDARG00000039266	rbm25a	99	96.203	ENSSMAG00000009745	rbm25a	54	66.893	Scophthalmus_maximus
ENSDARG00000039266	rbm25a	99	92.405	ENSSMAG00000002520	rbm25b	54	63.801	Scophthalmus_maximus
ENSDARG00000039266	rbm25a	99	97.468	ENSSDUG00000017984	rbm25a	54	67.426	Seriola_dumerili
ENSDARG00000039266	rbm25a	99	92.405	ENSSLDG00000024573	rbm25b	95	66.438	Seriola_lalandi_dorsalis
ENSDARG00000039266	rbm25a	99	97.468	ENSSLDG00000010342	rbm25a	53	67.426	Seriola_lalandi_dorsalis
ENSDARG00000039266	rbm25a	100	67.568	ENSSPUG00000000970	-	66	65.405	Sphenodon_punctatus
ENSDARG00000039266	rbm25a	99	96.203	ENSSPUG00000000999	-	100	71.031	Sphenodon_punctatus
ENSDARG00000039266	rbm25a	99	97.468	ENSSPAG00000011114	rbm25a	54	58.940	Stegastes_partitus
ENSDARG00000039266	rbm25a	99	92.405	ENSSPAG00000016168	rbm25b	50	70.500	Stegastes_partitus
ENSDARG00000039266	rbm25a	99	97.468	ENSTRUG00000003076	rbm25a	56	64.155	Takifugu_rubripes
ENSDARG00000039266	rbm25a	99	91.139	ENSTRUG00000017964	rbm25b	51	69.554	Takifugu_rubripes
ENSDARG00000039266	rbm25a	99	93.671	ENSTNIG00000012222	rbm25b	65	68.689	Tetraodon_nigroviridis
ENSDARG00000039266	rbm25a	99	97.468	ENSTNIG00000004673	rbm25a	99	67.030	Tetraodon_nigroviridis
ENSDARG00000039266	rbm25a	98	94.872	ENSUAMG00000007707	RBM25	100	68.025	Ursus_americanus
ENSDARG00000039266	rbm25a	99	94.937	ENSXETG00000021857	rbm25	52	69.900	Xenopus_tropicalis
ENSDARG00000039266	rbm25a	100	67.222	ENSXCOG00000002222	rbm25b	51	63.196	Xiphophorus_couchianus
ENSDARG00000039266	rbm25a	99	93.671	ENSXCOG00000004043	RBM25	52	69.324	Xiphophorus_couchianus
ENSDARG00000039266	rbm25a	99	92.405	ENSXMAG00000017290	rbm25b	54	61.521	Xiphophorus_maculatus
ENSDARG00000039266	rbm25a	99	93.671	ENSXMAG00000009077	RBM25	50	69.458	Xiphophorus_maculatus