EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000039543 (Gene tree)
Gene ID: 751746
Gene Symbol: mrps6
Alias: zgc:153390
Full Name: mitochondrial ribosomal protein S6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5307 bases
Position: chr13:4995433-5000739
Accession: ZDB-GENE-060825-59
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000057773	Ribosomal_S6	PF01250.17	6.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000057774	-	771	-	ENSDARP00000057773	118 (aa)	-	B8JIY3

Gene Model

Click here to download ENSDARG00000039543's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000039543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000039543	mrps6	92	54.630	ENSG00000243927	MRPS6	86	54.630	Homo_sapiens
ENSDARG00000039543	mrps6	91	65.421	ENSAPOG00000001860	mrps6	92	65.421	Acanthochromis_polyacanthus
ENSDARG00000039543	mrps6	84	51.515	ENSAMEG00000014707	MRPS6	82	51.515	Ailuropoda_melanoleuca
ENSDARG00000039543	mrps6	91	66.355	ENSACIG00000009753	mrps6	86	66.355	Amphilophus_citrinellus
ENSDARG00000039543	mrps6	82	69.072	ENSAOCG00000003466	mrps6	80	69.072	Amphiprion_ocellaris
ENSDARG00000039543	mrps6	91	65.421	ENSAPEG00000015740	mrps6	97	65.421	Amphiprion_percula
ENSDARG00000039543	mrps6	91	69.159	ENSATEG00000017579	mrps6	97	69.159	Anabas_testudineus
ENSDARG00000039543	mrps6	94	55.856	ENSACAG00000005071	MRPS6	90	55.856	Anolis_carolinensis
ENSDARG00000039543	mrps6	92	53.704	ENSANAG00000022450	MRPS6	86	53.704	Aotus_nancymaae
ENSDARG00000039543	mrps6	97	62.609	ENSACLG00000026010	mrps6	94	62.609	Astatotilapia_calliptera
ENSDARG00000039543	mrps6	97	73.913	ENSAMXG00000026285	mrps6	98	73.913	Astyanax_mexicanus
ENSDARG00000039543	mrps6	92	59.259	ENSBTAG00000012594	MRPS6	87	59.259	Bos_taurus
ENSDARG00000039543	mrps6	92	54.630	ENSCJAG00000043803	MRPS6	86	54.630	Callithrix_jacchus
ENSDARG00000039543	mrps6	92	55.556	ENSCAFG00000028779	MRPS6	87	55.556	Canis_familiaris
ENSDARG00000039543	mrps6	92	55.556	ENSCAFG00020024603	MRPS6	87	55.556	Canis_lupus_dingo
ENSDARG00000039543	mrps6	92	57.407	ENSCHIG00000020464	MRPS6	87	57.407	Capra_hircus
ENSDARG00000039543	mrps6	92	54.630	ENSTSYG00000004217	MRPS6	86	54.630	Carlito_syrichta
ENSDARG00000039543	mrps6	79	50.538	ENSCAPG00000003067	MRPS6	85	50.538	Cavia_aperea
ENSDARG00000039543	mrps6	79	50.538	ENSCPOG00000036980	MRPS6	85	50.538	Cavia_porcellus
ENSDARG00000039543	mrps6	92	55.556	ENSCCAG00000024506	MRPS6	86	55.556	Cebus_capucinus
ENSDARG00000039543	mrps6	92	52.778	ENSCATG00000005273	MRPS6	86	52.778	Cercocebus_atys
ENSDARG00000039543	mrps6	79	52.688	ENSCLAG00000004549	MRPS6	85	52.688	Chinchilla_lanigera
ENSDARG00000039543	mrps6	92	52.778	ENSCSAG00000009933	MRPS6	86	52.778	Chlorocebus_sabaeus
ENSDARG00000039543	mrps6	79	51.613	ENSCHOG00000003863	MRPS6	85	51.613	Choloepus_hoffmanni
ENSDARG00000039543	mrps6	79	49.462	ENSCANG00000041718	MRPS6	85	49.462	Colobus_angolensis_palliatus
ENSDARG00000039543	mrps6	92	55.556	ENSCGRG00001004615	Mrps6	86	55.556	Cricetulus_griseus_chok1gshd
ENSDARG00000039543	mrps6	79	52.688	ENSCGRG00000018105	Mrps6	85	52.688	Cricetulus_griseus_crigri
ENSDARG00000039543	mrps6	91	71.028	ENSCSEG00000011973	mrps6	97	71.028	Cynoglossus_semilaevis
ENSDARG00000039543	mrps6	100	66.949	ENSCVAG00000004108	mrps6	100	66.949	Cyprinodon_variegatus
ENSDARG00000039543	mrps6	92	59.259	ENSDNOG00000041980	MRPS6	87	59.259	Dasypus_novemcinctus
ENSDARG00000039543	mrps6	92	55.556	ENSDORG00000028219	Mrps6	86	55.556	Dipodomys_ordii
ENSDARG00000039543	mrps6	92	43.519	ENSEBUG00000001150	mrps6	87	43.519	Eptatretus_burgeri
ENSDARG00000039543	mrps6	79	52.688	ENSEASG00005006162	MRPS6	77	52.688	Equus_asinus_asinus
ENSDARG00000039543	mrps6	100	70.339	ENSELUG00000015914	mrps6	100	70.339	Esox_lucius
ENSDARG00000039543	mrps6	92	60.185	ENSFCAG00000035307	MRPS6	87	60.185	Felis_catus
ENSDARG00000039543	mrps6	81	72.632	ENSFALG00000005093	MRPS6	79	72.632	Ficedula_albicollis
ENSDARG00000039543	mrps6	79	54.839	ENSFDAG00000014986	MRPS6	85	54.839	Fukomys_damarensis
ENSDARG00000039543	mrps6	91	68.224	ENSFHEG00000005395	mrps6	88	68.224	Fundulus_heteroclitus
ENSDARG00000039543	mrps6	91	71.028	ENSGMOG00000019810	mrps6	91	71.028	Gadus_morhua
ENSDARG00000039543	mrps6	95	59.821	ENSGAFG00000006521	mrps6	97	59.821	Gambusia_affinis
ENSDARG00000039543	mrps6	92	59.259	ENSGAGG00000017604	MRPS6	88	59.259	Gopherus_agassizii
ENSDARG00000039543	mrps6	79	50.538	ENSGGOG00000043405	MRPS6	85	50.538	Gorilla_gorilla
ENSDARG00000039543	mrps6	96	63.717	ENSHBUG00000010529	mrps6	88	63.717	Haplochromis_burtoni
ENSDARG00000039543	mrps6	92	60.185	ENSHGLG00000011207	MRPS6	87	60.185	Heterocephalus_glaber_female
ENSDARG00000039543	mrps6	79	56.989	ENSHGLG00100016976	MRPS6	85	56.989	Heterocephalus_glaber_male
ENSDARG00000039543	mrps6	92	64.815	ENSHCOG00000012233	mrps6	93	64.815	Hippocampus_comes
ENSDARG00000039543	mrps6	79	52.688	ENSSTOG00000028147	MRPS6	85	52.688	Ictidomys_tridecemlineatus
ENSDARG00000039543	mrps6	92	57.407	ENSJJAG00000019018	Mrps6	86	57.407	Jaculus_jaculus
ENSDARG00000039543	mrps6	91	70.093	ENSKMAG00000015801	mrps6	90	70.093	Kryptolebias_marmoratus
ENSDARG00000039543	mrps6	92	61.111	ENSLBEG00000012963	mrps6	89	61.111	Labrus_bergylta
ENSDARG00000039543	mrps6	100	53.333	ENSLACG00000011712	MRPS6	98	53.333	Latimeria_chalumnae
ENSDARG00000039543	mrps6	92	67.593	ENSLOCG00000018238	mrps6	90	67.593	Lepisosteus_oculatus
ENSDARG00000039543	mrps6	87	50.000	ENSLAFG00000020645	MRPS6	85	50.000	Loxodonta_africana
ENSDARG00000039543	mrps6	81	48.421	ENSMFAG00000032733	MRPS6	82	48.421	Macaca_fascicularis
ENSDARG00000039543	mrps6	81	48.421	ENSMMUG00000023156	MRPS6	82	48.421	Macaca_mulatta
ENSDARG00000039543	mrps6	81	48.421	ENSMNEG00000004266	MRPS6	82	48.421	Macaca_nemestrina
ENSDARG00000039543	mrps6	79	48.387	ENSMLEG00000042372	MRPS6	85	48.387	Mandrillus_leucophaeus
ENSDARG00000039543	mrps6	97	65.789	ENSMAMG00000019881	mrps6	99	65.789	Mastacembelus_armatus
ENSDARG00000039543	mrps6	97	62.609	ENSMZEG00005008327	mrps6	94	62.609	Maylandia_zebra
ENSDARG00000039543	mrps6	80	56.383	ENSMGAG00000016139	MRPS6	87	56.383	Meleagris_gallopavo
ENSDARG00000039543	mrps6	92	59.259	ENSMICG00000027621	MRPS6	86	59.259	Microcebus_murinus
ENSDARG00000039543	mrps6	92	57.407	ENSMOCG00000006588	Mrps6	86	57.407	Microtus_ochrogaster
ENSDARG00000039543	mrps6	91	67.290	ENSMMOG00000003410	mrps6	80	67.290	Mola_mola
ENSDARG00000039543	mrps6	81	52.632	ENSMODG00000021054	MRPS6	81	52.632	Monodelphis_domestica
ENSDARG00000039543	mrps6	91	71.028	ENSMALG00000002531	mrps6	97	71.028	Monopterus_albus
ENSDARG00000039543	mrps6	92	55.556	MGP_CAROLIEiJ_G0020970	Mrps6	86	55.556	Mus_caroli
ENSDARG00000039543	mrps6	92	55.556	ENSMUSG00000039680	Mrps6	86	55.556	Mus_musculus
ENSDARG00000039543	mrps6	92	57.407	MGP_PahariEiJ_G0016675	Mrps6	86	57.407	Mus_pahari
ENSDARG00000039543	mrps6	92	55.556	MGP_SPRETEiJ_G0021876	Mrps6	86	55.556	Mus_spretus
ENSDARG00000039543	mrps6	92	57.407	ENSMPUG00000001330	MRPS6	87	57.407	Mustela_putorius_furo
ENSDARG00000039543	mrps6	81	52.632	ENSMLUG00000027328	MRPS6	86	52.632	Myotis_lucifugus
ENSDARG00000039543	mrps6	92	57.407	ENSNGAG00000004525	Mrps6	86	57.407	Nannospalax_galili
ENSDARG00000039543	mrps6	97	61.739	ENSNBRG00000015785	mrps6	94	61.739	Neolamprologus_brichardi
ENSDARG00000039543	mrps6	92	53.704	ENSNLEG00000033707	MRPS6	87	53.704	Nomascus_leucogenys
ENSDARG00000039543	mrps6	92	55.556	ENSMEUG00000006954	MRPS6	63	55.556	Notamacropus_eugenii
ENSDARG00000039543	mrps6	79	48.387	ENSOPRG00000018417	-	51	48.387	Ochotona_princeps
ENSDARG00000039543	mrps6	92	54.630	ENSODEG00000003176	-	87	54.630	Octodon_degus
ENSDARG00000039543	mrps6	92	53.704	ENSODEG00000019820	-	87	53.704	Octodon_degus
ENSDARG00000039543	mrps6	92	52.778	ENSODEG00000019042	-	87	52.778	Octodon_degus
ENSDARG00000039543	mrps6	97	66.087	ENSONIG00000009920	mrps6	97	66.087	Oreochromis_niloticus
ENSDARG00000039543	mrps6	79	52.688	ENSOCUG00000025692	MRPS6	84	52.688	Oryctolagus_cuniculus
ENSDARG00000039543	mrps6	91	68.807	ENSORLG00000011435	mrps6	90	68.807	Oryzias_latipes
ENSDARG00000039543	mrps6	85	71.000	ENSORLG00020016619	mrps6	88	71.000	Oryzias_latipes_hni
ENSDARG00000039543	mrps6	84	73.737	ENSORLG00015001426	mrps6	91	73.737	Oryzias_latipes_hsok
ENSDARG00000039543	mrps6	91	68.224	ENSOMEG00000022340	mrps6	91	68.224	Oryzias_melastigma
ENSDARG00000039543	mrps6	92	58.333	ENSOGAG00000031219	MRPS6	87	58.333	Otolemur_garnettii
ENSDARG00000039543	mrps6	80	53.191	ENSOARG00000012707	MRPS6	84	48.598	Ovis_aries
ENSDARG00000039543	mrps6	79	50.538	ENSPPAG00000033507	MRPS6	85	50.538	Pan_paniscus
ENSDARG00000039543	mrps6	79	56.989	ENSPPRG00000011728	MRPS6	75	56.989	Panthera_pardus
ENSDARG00000039543	mrps6	79	56.989	ENSPTIG00000000875	MRPS6	75	56.989	Panthera_tigris_altaica
ENSDARG00000039543	mrps6	92	54.630	ENSPTRG00000013877	MRPS6	86	54.630	Pan_troglodytes
ENSDARG00000039543	mrps6	92	51.852	ENSPANG00000033815	MRPS6	86	51.852	Papio_anubis
ENSDARG00000039543	mrps6	90	66.981	ENSPKIG00000006507	mrps6	88	66.981	Paramormyrops_kingsleyae
ENSDARG00000039543	mrps6	85	52.000	ENSPSIG00000017909	MRPS6	86	54.444	Pelodiscus_sinensis
ENSDARG00000039543	mrps6	84	54.545	ENSPEMG00000023075	Mrps6	85	55.914	Peromyscus_maniculatus_bairdii
ENSDARG00000039543	mrps6	92	55.556	ENSPCIG00000008946	MRPS6	89	55.556	Phascolarctos_cinereus
ENSDARG00000039543	mrps6	91	69.159	ENSPFOG00000016295	mrps6	98	69.159	Poecilia_formosa
ENSDARG00000039543	mrps6	86	70.588	ENSPLAG00000003859	mrps6	84	70.588	Poecilia_latipinna
ENSDARG00000039543	mrps6	90	68.868	ENSPMEG00000019989	mrps6	91	68.868	Poecilia_mexicana
ENSDARG00000039543	mrps6	91	67.290	ENSPREG00000023188	mrps6	97	67.290	Poecilia_reticulata
ENSDARG00000039543	mrps6	81	51.042	ENSPPYG00000011386	MRPS6	74	51.042	Pongo_abelii
ENSDARG00000039543	mrps6	79	48.387	ENSPCAG00000002299	MRPS6	85	48.387	Procavia_capensis
ENSDARG00000039543	mrps6	92	57.407	ENSPCOG00000013816	MRPS6	86	57.407	Propithecus_coquereli
ENSDARG00000039543	mrps6	92	58.333	ENSPVAG00000013059	MRPS6	59	58.333	Pteropus_vampyrus
ENSDARG00000039543	mrps6	97	61.739	ENSPNYG00000017777	mrps6	94	61.739	Pundamilia_nyererei
ENSDARG00000039543	mrps6	91	71.681	ENSPNAG00000027225	mrps6	90	71.681	Pygocentrus_nattereri
ENSDARG00000039543	mrps6	92	57.407	ENSRNOG00000059381	Mrps6	86	57.407	Rattus_norvegicus
ENSDARG00000039543	mrps6	79	49.462	ENSRBIG00000003438	MRPS6	85	49.462	Rhinopithecus_bieti
ENSDARG00000039543	mrps6	79	48.387	ENSRROG00000040127	MRPS6	74	48.387	Rhinopithecus_roxellana
ENSDARG00000039543	mrps6	80	51.064	ENSSBOG00000034972	MRPS6	84	51.064	Saimiri_boliviensis_boliviensis
ENSDARG00000039543	mrps6	90	61.682	ENSSFOG00015003890	mrps6	84	61.682	Scleropages_formosus
ENSDARG00000039543	mrps6	92	70.000	ENSSMAG00000008876	mrps6	95	70.000	Scophthalmus_maximus
ENSDARG00000039543	mrps6	90	70.755	ENSSDUG00000005175	mrps6	98	70.755	Seriola_dumerili
ENSDARG00000039543	mrps6	91	71.028	ENSSLDG00000023246	mrps6	97	71.028	Seriola_lalandi_dorsalis
ENSDARG00000039543	mrps6	65	62.338	ENSSPUG00000013319	MRPS6	78	62.338	Sphenodon_punctatus
ENSDARG00000039543	mrps6	90	75.472	ENSSPAG00000010499	mrps6	96	75.472	Stegastes_partitus
ENSDARG00000039543	mrps6	92	59.259	ENSSSCG00000026981	MRPS6	87	59.259	Sus_scrofa
ENSDARG00000039543	mrps6	92	60.185	ENSTGUG00000000454	MRPS6	88	60.185	Taeniopygia_guttata
ENSDARG00000039543	mrps6	92	70.370	ENSTRUG00000021829	mrps6	95	70.370	Takifugu_rubripes
ENSDARG00000039543	mrps6	79	54.839	ENSTTRG00000004878	MRPS6	85	54.839	Tursiops_truncatus
ENSDARG00000039543	mrps6	84	51.515	ENSUAMG00000028318	MRPS6	86	51.515	Ursus_americanus
ENSDARG00000039543	mrps6	84	51.515	ENSUMAG00000020133	MRPS6	80	51.515	Ursus_maritimus
ENSDARG00000039543	mrps6	79	48.387	ENSVPAG00000009160	MRPS6	85	48.387	Vicugna_pacos
ENSDARG00000039543	mrps6	84	48.485	ENSVVUG00000022921	MRPS6	86	48.485	Vulpes_vulpes
ENSDARG00000039543	mrps6	92	53.704	ENSXETG00000032139	MRPS6	87	61.458	Xenopus_tropicalis
ENSDARG00000039543	mrps6	91	68.224	ENSXMAG00000019807	mrps6	96	68.224	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0019843	rRNA binding	-	IEA	Function
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function