EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000040443 (Gene tree)
Gene ID: 449992
Gene Symbol: polr2i
Alias: zgc:103515
Full Name: polymerase (RNA) II (DNA directed) polypeptide I
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 3481 bases
Position: chr18:40909821-40913301
Accession: ZDB-GENE-041010-106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000059195	RNA_POL_M_15KD	PF02150.16	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135017	-	823	-	-	- (aa)	-	-
ENSDART00000059196	-	744	-	ENSDARP00000059195	126 (aa)	-	Q1LVK2
ENSDART00000098878	-	333	-	ENSDARP00000089648	57 (aa)	-	Q1LVK1

Gene Model

Click here to download ENSDARG00000040443's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000040443's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000040443	polr2i	89	30.833	ENSDARG00000037835	polr3k	99	30.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000040443	polr2i	96	95.868	ENSG00000105258	POLR2I	97	95.868	Homo_sapiens
ENSDARG00000040443	polr2i	100	98.413	ENSAPOG00000012409	polr2i	100	98.413	Acanthochromis_polyacanthus
ENSDARG00000040443	polr2i	96	95.868	ENSAMEG00000000993	POLR2I	97	95.868	Ailuropoda_melanoleuca
ENSDARG00000040443	polr2i	100	98.413	ENSAOCG00000024378	polr2i	100	98.413	Amphiprion_ocellaris
ENSDARG00000040443	polr2i	100	98.413	ENSAPEG00000021748	polr2i	100	98.413	Amphiprion_percula
ENSDARG00000040443	polr2i	100	96.032	ENSATEG00000000758	polr2i	100	96.032	Anabas_testudineus
ENSDARG00000040443	polr2i	96	95.868	ENSANAG00000035318	POLR2I	97	95.868	Aotus_nancymaae
ENSDARG00000040443	polr2i	100	97.619	ENSACLG00000001663	polr2i	100	97.619	Astatotilapia_calliptera
ENSDARG00000040443	polr2i	100	97.619	ENSAMXG00000030198	polr2i	100	97.619	Astyanax_mexicanus
ENSDARG00000040443	polr2i	96	95.868	ENSBTAG00000015002	POLR2I	97	95.868	Bos_taurus
ENSDARG00000040443	polr2i	96	64.463	WBGene00022400	rpb-9	72	64.463	Caenorhabditis_elegans
ENSDARG00000040443	polr2i	96	95.868	ENSCJAG00000009671	POLR2I	97	95.868	Callithrix_jacchus
ENSDARG00000040443	polr2i	96	95.868	ENSCAFG00000006601	POLR2I	97	95.868	Canis_familiaris
ENSDARG00000040443	polr2i	96	95.868	ENSCAFG00020018113	POLR2I	97	95.868	Canis_lupus_dingo
ENSDARG00000040443	polr2i	96	95.868	ENSCHIG00000011961	POLR2I	97	95.868	Capra_hircus
ENSDARG00000040443	polr2i	96	95.868	ENSTSYG00000028318	-	100	96.117	Carlito_syrichta
ENSDARG00000040443	polr2i	82	67.961	ENSTSYG00000031752	-	95	67.961	Carlito_syrichta
ENSDARG00000040443	polr2i	96	95.868	ENSCPOG00000012097	POLR2I	97	95.868	Cavia_porcellus
ENSDARG00000040443	polr2i	96	94.215	ENSCCAG00000032214	-	97	94.215	Cebus_capucinus
ENSDARG00000040443	polr2i	96	95.868	ENSCCAG00000022138	-	97	95.868	Cebus_capucinus
ENSDARG00000040443	polr2i	96	95.868	ENSCATG00000017413	POLR2I	97	95.868	Cercocebus_atys
ENSDARG00000040443	polr2i	96	95.868	ENSCLAG00000011800	POLR2I	97	95.868	Chinchilla_lanigera
ENSDARG00000040443	polr2i	96	95.868	ENSCSAG00000004254	POLR2I	97	95.868	Chlorocebus_sabaeus
ENSDARG00000040443	polr2i	96	95.868	ENSCPBG00000006726	POLR2I	97	95.868	Chrysemys_picta_bellii
ENSDARG00000040443	polr2i	93	81.197	ENSCSAVG00000010630	-	93	81.197	Ciona_savignyi
ENSDARG00000040443	polr2i	80	95.050	ENSCANG00000031951	POLR2I	96	95.050	Colobus_angolensis_palliatus
ENSDARG00000040443	polr2i	100	94.444	ENSCSEG00000002213	polr2i	100	94.444	Cynoglossus_semilaevis
ENSDARG00000040443	polr2i	100	95.238	ENSCVAG00000014797	polr2i	100	95.238	Cyprinodon_variegatus
ENSDARG00000040443	polr2i	96	95.868	ENSDNOG00000015842	POLR2I	97	95.868	Dasypus_novemcinctus
ENSDARG00000040443	polr2i	88	73.874	ENSDORG00000028728	-	95	73.874	Dipodomys_ordii
ENSDARG00000040443	polr2i	76	73.958	ENSDORG00000028026	-	99	73.958	Dipodomys_ordii
ENSDARG00000040443	polr2i	96	95.868	ENSDORG00000001852	-	97	95.868	Dipodomys_ordii
ENSDARG00000040443	polr2i	90	75.439	ENSDORG00000029259	-	95	75.439	Dipodomys_ordii
ENSDARG00000040443	polr2i	93	78.632	FBgn0004855	RpII15	91	78.632	Drosophila_melanogaster
ENSDARG00000040443	polr2i	96	95.868	ENSETEG00000012679	POLR2I	97	95.868	Echinops_telfairi
ENSDARG00000040443	polr2i	100	89.764	ENSEBUG00000007333	polr2i	100	95.146	Eptatretus_burgeri
ENSDARG00000040443	polr2i	96	95.868	ENSEASG00005002231	POLR2I	97	95.868	Equus_asinus_asinus
ENSDARG00000040443	polr2i	96	95.868	ENSECAG00000013654	POLR2I	97	95.868	Equus_caballus
ENSDARG00000040443	polr2i	96	95.868	ENSEEUG00000002113	POLR2I	97	95.868	Erinaceus_europaeus
ENSDARG00000040443	polr2i	100	97.619	ENSELUG00000018012	polr2i	100	97.619	Esox_lucius
ENSDARG00000040443	polr2i	96	95.868	ENSFCAG00000026052	POLR2I	97	95.868	Felis_catus
ENSDARG00000040443	polr2i	51	93.750	ENSFALG00000006198	POLR2I	100	93.750	Ficedula_albicollis
ENSDARG00000040443	polr2i	96	95.868	ENSFDAG00000011350	POLR2I	97	95.868	Fukomys_damarensis
ENSDARG00000040443	polr2i	100	96.032	ENSFHEG00000015659	polr2i	100	96.032	Fundulus_heteroclitus
ENSDARG00000040443	polr2i	100	96.825	ENSGMOG00000013806	polr2i	100	96.825	Gadus_morhua
ENSDARG00000040443	polr2i	100	90.476	ENSGALG00000038595	POLR2I	96	90.476	Gallus_gallus
ENSDARG00000040443	polr2i	100	99.206	ENSGAFG00000001037	polr2i	100	99.206	Gambusia_affinis
ENSDARG00000040443	polr2i	100	97.619	ENSGACG00000006679	polr2i	100	97.619	Gasterosteus_aculeatus
ENSDARG00000040443	polr2i	96	95.868	ENSGAGG00000015806	POLR2I	97	95.868	Gopherus_agassizii
ENSDARG00000040443	polr2i	96	95.868	ENSGGOG00000015426	POLR2I	97	95.868	Gorilla_gorilla
ENSDARG00000040443	polr2i	100	96.825	ENSHBUG00000004140	polr2i	100	96.825	Haplochromis_burtoni
ENSDARG00000040443	polr2i	82	96.117	ENSHGLG00000007388	POLR2I	100	96.117	Heterocephalus_glaber_female
ENSDARG00000040443	polr2i	82	96.117	ENSHGLG00100014515	POLR2I	100	96.117	Heterocephalus_glaber_male
ENSDARG00000040443	polr2i	100	97.619	ENSHCOG00000010967	polr2i	100	97.619	Hippocampus_comes
ENSDARG00000040443	polr2i	100	97.619	ENSIPUG00000001127	polr2i	100	97.619	Ictalurus_punctatus
ENSDARG00000040443	polr2i	96	95.868	ENSSTOG00000009411	POLR2I	97	95.868	Ictidomys_tridecemlineatus
ENSDARG00000040443	polr2i	96	95.868	ENSJJAG00000014400	Polr2i	97	95.868	Jaculus_jaculus
ENSDARG00000040443	polr2i	100	98.413	ENSKMAG00000001567	polr2i	100	98.413	Kryptolebias_marmoratus
ENSDARG00000040443	polr2i	100	97.619	ENSLBEG00000001220	polr2i	100	97.619	Labrus_bergylta
ENSDARG00000040443	polr2i	71	96.629	ENSLBEG00000028538	-	100	96.629	Labrus_bergylta
ENSDARG00000040443	polr2i	98	93.600	ENSLACG00000009590	POLR2I	100	93.600	Latimeria_chalumnae
ENSDARG00000040443	polr2i	100	98.413	ENSLOCG00000014818	polr2i	100	98.413	Lepisosteus_oculatus
ENSDARG00000040443	polr2i	96	95.868	ENSLAFG00000015527	POLR2I	97	95.868	Loxodonta_africana
ENSDARG00000040443	polr2i	96	95.868	ENSMFAG00000039443	POLR2I	97	95.868	Macaca_fascicularis
ENSDARG00000040443	polr2i	82	96.117	ENSMMUG00000000522	POLR2I	100	96.117	Macaca_mulatta
ENSDARG00000040443	polr2i	96	95.868	ENSMNEG00000029421	POLR2I	97	95.868	Macaca_nemestrina
ENSDARG00000040443	polr2i	96	95.868	ENSMLEG00000039720	POLR2I	97	95.868	Mandrillus_leucophaeus
ENSDARG00000040443	polr2i	100	97.619	ENSMAMG00000013970	polr2i	100	97.619	Mastacembelus_armatus
ENSDARG00000040443	polr2i	100	97.619	ENSMZEG00005013082	polr2i	100	97.619	Maylandia_zebra
ENSDARG00000040443	polr2i	100	90.476	ENSMGAG00000008576	POLR2I	100	90.476	Meleagris_gallopavo
ENSDARG00000040443	polr2i	96	95.868	ENSMAUG00000001001	Polr2i	97	95.868	Mesocricetus_auratus
ENSDARG00000040443	polr2i	96	95.868	ENSMICG00000010241	POLR2I	97	95.868	Microcebus_murinus
ENSDARG00000040443	polr2i	96	95.868	ENSMOCG00000011984	Polr2i	97	95.868	Microtus_ochrogaster
ENSDARG00000040443	polr2i	82	99.029	ENSMMOG00000004945	polr2i	100	99.029	Mola_mola
ENSDARG00000040443	polr2i	96	95.868	ENSMODG00000014172	POLR2I	97	95.868	Monodelphis_domestica
ENSDARG00000040443	polr2i	96	95.868	MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	Mus_caroli
ENSDARG00000040443	polr2i	96	95.868	ENSMUSG00000019738	Polr2i	100	96.117	Mus_musculus
ENSDARG00000040443	polr2i	96	95.868	MGP_PahariEiJ_G0012741	Polr2i	100	96.117	Mus_pahari
ENSDARG00000040443	polr2i	96	95.868	MGP_SPRETEiJ_G0030603	Polr2i	100	96.117	Mus_spretus
ENSDARG00000040443	polr2i	96	95.868	ENSMPUG00000005702	POLR2I	97	95.868	Mustela_putorius_furo
ENSDARG00000040443	polr2i	96	95.868	ENSMLUG00000012317	POLR2I	97	95.868	Myotis_lucifugus
ENSDARG00000040443	polr2i	96	95.868	ENSNGAG00000014966	Polr2i	97	95.868	Nannospalax_galili
ENSDARG00000040443	polr2i	100	97.619	ENSNBRG00000000723	polr2i	100	97.619	Neolamprologus_brichardi
ENSDARG00000040443	polr2i	96	95.868	ENSNLEG00000011691	POLR2I	97	95.868	Nomascus_leucogenys
ENSDARG00000040443	polr2i	96	95.868	ENSOPRG00000001789	-	97	95.868	Ochotona_princeps
ENSDARG00000040443	polr2i	96	95.041	ENSOPRG00000008681	-	97	95.041	Ochotona_princeps
ENSDARG00000040443	polr2i	96	95.868	ENSODEG00000015015	-	97	95.868	Octodon_degus
ENSDARG00000040443	polr2i	92	79.310	ENSODEG00000017901	-	88	79.310	Octodon_degus
ENSDARG00000040443	polr2i	100	97.619	ENSONIG00000005397	polr2i	100	97.619	Oreochromis_niloticus
ENSDARG00000040443	polr2i	96	95.868	ENSOCUG00000013044	POLR2I	97	95.868	Oryctolagus_cuniculus
ENSDARG00000040443	polr2i	96	95.868	ENSOCUG00000024998	-	97	95.868	Oryctolagus_cuniculus
ENSDARG00000040443	polr2i	100	97.619	ENSORLG00000013308	polr2i	100	97.619	Oryzias_latipes
ENSDARG00000040443	polr2i	100	98.413	ENSORLG00020011281	polr2i	100	98.413	Oryzias_latipes_hni
ENSDARG00000040443	polr2i	100	98.413	ENSORLG00015019529	polr2i	100	98.413	Oryzias_latipes_hsok
ENSDARG00000040443	polr2i	100	98.413	ENSOMEG00000012586	polr2i	100	98.413	Oryzias_melastigma
ENSDARG00000040443	polr2i	96	95.868	ENSOGAG00000024254	POLR2I	97	95.868	Otolemur_garnettii
ENSDARG00000040443	polr2i	96	95.868	ENSOARG00000005266	POLR2I	97	95.868	Ovis_aries
ENSDARG00000040443	polr2i	96	95.868	ENSPPAG00000033446	POLR2I	97	95.868	Pan_paniscus
ENSDARG00000040443	polr2i	96	95.868	ENSPPRG00000007194	POLR2I	97	95.868	Panthera_pardus
ENSDARG00000040443	polr2i	96	95.868	ENSPTIG00000018661	POLR2I	97	95.868	Panthera_tigris_altaica
ENSDARG00000040443	polr2i	96	95.868	ENSPTRG00000010885	POLR2I	97	95.868	Pan_troglodytes
ENSDARG00000040443	polr2i	96	95.868	ENSPANG00000004508	POLR2I	97	95.868	Papio_anubis
ENSDARG00000040443	polr2i	100	97.619	ENSPKIG00000001086	polr2i	100	97.619	Paramormyrops_kingsleyae
ENSDARG00000040443	polr2i	82	96.117	ENSPSIG00000011560	POLR2I	100	96.117	Pelodiscus_sinensis
ENSDARG00000040443	polr2i	100	92.308	ENSPMGG00000016154	polr2i	100	92.308	Periophthalmus_magnuspinnatus
ENSDARG00000040443	polr2i	96	95.868	ENSPEMG00000014212	Polr2i	97	95.868	Peromyscus_maniculatus_bairdii
ENSDARG00000040443	polr2i	96	95.868	ENSPCIG00000015436	-	97	95.868	Phascolarctos_cinereus
ENSDARG00000040443	polr2i	100	99.206	ENSPFOG00000016816	polr2i	100	99.206	Poecilia_formosa
ENSDARG00000040443	polr2i	100	99.206	ENSPLAG00000010639	polr2i	100	99.206	Poecilia_latipinna
ENSDARG00000040443	polr2i	100	99.206	ENSPMEG00000005956	polr2i	100	99.206	Poecilia_mexicana
ENSDARG00000040443	polr2i	100	99.206	ENSPREG00000004227	polr2i	100	99.206	Poecilia_reticulata
ENSDARG00000040443	polr2i	96	95.868	ENSPPYG00000009897	POLR2I	97	95.868	Pongo_abelii
ENSDARG00000040443	polr2i	96	95.868	ENSPCAG00000003494	POLR2I	97	95.868	Procavia_capensis
ENSDARG00000040443	polr2i	96	95.868	ENSPCOG00000018643	POLR2I	97	95.868	Propithecus_coquereli
ENSDARG00000040443	polr2i	96	95.868	ENSPVAG00000012883	POLR2I	97	95.868	Pteropus_vampyrus
ENSDARG00000040443	polr2i	100	97.619	ENSPNYG00000011908	polr2i	100	97.619	Pundamilia_nyererei
ENSDARG00000040443	polr2i	100	97.619	ENSPNAG00000005859	polr2i	100	97.619	Pygocentrus_nattereri
ENSDARG00000040443	polr2i	96	95.868	ENSRNOG00000020799	LOC103690054	97	95.868	Rattus_norvegicus
ENSDARG00000040443	polr2i	96	95.868	ENSRNOG00000050560	Polr2i	97	95.868	Rattus_norvegicus
ENSDARG00000040443	polr2i	96	95.868	ENSRBIG00000037225	POLR2I	97	95.868	Rhinopithecus_bieti
ENSDARG00000040443	polr2i	96	95.868	ENSRROG00000042843	POLR2I	97	95.868	Rhinopithecus_roxellana
ENSDARG00000040443	polr2i	88	45.045	YGL070C	RPB9	89	45.045	Saccharomyces_cerevisiae
ENSDARG00000040443	polr2i	95	75.833	ENSSBOG00000022998	-	71	75.833	Saimiri_boliviensis_boliviensis
ENSDARG00000040443	polr2i	96	95.868	ENSSBOG00000030799	-	97	95.868	Saimiri_boliviensis_boliviensis
ENSDARG00000040443	polr2i	100	97.619	ENSSFOG00015022523	polr2i	100	97.619	Scleropages_formosus
ENSDARG00000040443	polr2i	100	96.825	ENSSMAG00000003335	polr2i	100	96.825	Scophthalmus_maximus
ENSDARG00000040443	polr2i	100	96.032	ENSSDUG00000005483	polr2i	100	96.032	Seriola_dumerili
ENSDARG00000040443	polr2i	100	96.032	ENSSLDG00000009341	polr2i	100	96.032	Seriola_lalandi_dorsalis
ENSDARG00000040443	polr2i	96	95.868	ENSSARG00000009331	POLR2I	97	95.868	Sorex_araneus
ENSDARG00000040443	polr2i	96	95.041	ENSSPUG00000012658	POLR2I	97	95.041	Sphenodon_punctatus
ENSDARG00000040443	polr2i	100	97.619	ENSSPAG00000015734	polr2i	100	97.619	Stegastes_partitus
ENSDARG00000040443	polr2i	96	95.868	ENSSSCG00000039196	POLR2I	97	95.868	Sus_scrofa
ENSDARG00000040443	polr2i	100	97.619	ENSTRUG00000022235	polr2i	100	97.619	Takifugu_rubripes
ENSDARG00000040443	polr2i	100	97.619	ENSTNIG00000011737	polr2i	100	97.619	Tetraodon_nigroviridis
ENSDARG00000040443	polr2i	96	95.868	ENSTTRG00000003919	POLR2I	97	95.868	Tursiops_truncatus
ENSDARG00000040443	polr2i	96	95.868	ENSUAMG00000020575	POLR2I	97	95.868	Ursus_americanus
ENSDARG00000040443	polr2i	96	95.868	ENSUMAG00000020809	POLR2I	97	95.868	Ursus_maritimus
ENSDARG00000040443	polr2i	96	95.868	ENSVVUG00000013588	POLR2I	97	95.868	Vulpes_vulpes
ENSDARG00000040443	polr2i	100	99.206	ENSXCOG00000001119	polr2i	100	99.206	Xiphophorus_couchianus
ENSDARG00000040443	polr2i	100	99.206	ENSXMAG00000021278	polr2i	100	99.206	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001193	maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0006283	transcription-coupled nucleotide-excision repair	21873635.	IBA	Process
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0006379	mRNA cleavage	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function