EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000040727 (Gene tree)
Gene ID
767802
Gene Symbol
tfb1m
Alias
im:7151479|zgc:153625
Full Name
transcription factor B1%2C mitochondrial
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
60303 bases
Position
chr17:49220126-49280428
Accession
ZDB-GENE-060929-1010
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000138823RrnaADPF00398.201.1e-4111
ENSDARP00000059657RrnaADPF00398.204.5e-3911
ENSDARP00000124704RrnaADPF00398.203.7e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000059658-1711-ENSDARP00000059657269 (aa)-F1QQ24
ENSDART00000150172-879-ENSDARP00000124704254 (aa)-F8W2J7
ENSDART00000169207-1372XM_005169880ENSDARP00000138823354 (aa)XP_005169937A0A0R4IU10
Gene Model
Click here to download ENSDARG00000040727's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000040727's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000040727tfb1m9875.000ENSG00000029639TFB1M9969.971Homo_sapiens
ENSDARG00000040727tfb1m9879.545ENSAPOG00000015493tfb1m9474.850Acanthochromis_polyacanthus
ENSDARG00000040727tfb1m9973.962ENSAMEG00000012761TFB1M9968.513Ailuropoda_melanoleuca
ENSDARG00000040727tfb1m7630.256ENSAMEG00000004123DIMT15730.256Ailuropoda_melanoleuca
ENSDARG00000040727tfb1m9879.167ENSACIG00000014290tfb1m9672.861Amphilophus_citrinellus
ENSDARG00000040727tfb1m9879.167ENSAOCG00000004027tfb1m9474.551Amphiprion_ocellaris
ENSDARG00000040727tfb1m9879.545ENSAPEG00000020359tfb1m9474.551Amphiprion_percula
ENSDARG00000040727tfb1m9879.167ENSATEG00000006826tfb1m9573.952Anabas_testudineus
ENSDARG00000040727tfb1m9873.106ENSAPLG00000006328TFB1M9569.552Anas_platyrhynchos
ENSDARG00000040727tfb1m7230.769ENSAPLG00000009464DIMT16730.769Anas_platyrhynchos
ENSDARG00000040727tfb1m6631.844ENSACAG00000008504DIMT16031.844Anolis_carolinensis
ENSDARG00000040727tfb1m9873.485ENSACAG00000005244TFB1M9967.151Anolis_carolinensis
ENSDARG00000040727tfb1m9973.585ENSANAG00000021469TFB1M9967.930Aotus_nancymaae
ENSDARG00000040727tfb1m9881.818ENSACLG00000018734tfb1m9674.928Astatotilapia_calliptera
ENSDARG00000040727tfb1m9882.576ENSAMXG00000036128tfb1m9577.299Astyanax_mexicanus
ENSDARG00000040727tfb1m9973.962ENSBTAG00000031895TFB1M9873.303Bos_taurus
ENSDARG00000040727tfb1m9647.348WBGene00020189tfbm-18845.092Caenorhabditis_elegans
ENSDARG00000040727tfb1m9974.340ENSCJAG00000012540TFB1M9969.208Callithrix_jacchus
ENSDARG00000040727tfb1m9974.717ENSCAFG00000000581TFB1M9571.560Canis_familiaris
ENSDARG00000040727tfb1m9974.717ENSCAFG00020015224TFB1M9571.560Canis_lupus_dingo
ENSDARG00000040727tfb1m6830.814ENSCAFG00020007532-5030.814Canis_lupus_dingo
ENSDARG00000040727tfb1m6830.814ENSCAFG00020007749-5030.814Canis_lupus_dingo
ENSDARG00000040727tfb1m6830.814ENSCAFG00020007558-5030.814Canis_lupus_dingo
ENSDARG00000040727tfb1m9974.340ENSCHIG00000017013TFB1M9971.299Capra_hircus
ENSDARG00000040727tfb1m7530.928ENSTSYG00000002134DIMT15630.928Carlito_syrichta
ENSDARG00000040727tfb1m9974.340ENSTSYG00000012298TFB1M9770.238Carlito_syrichta
ENSDARG00000040727tfb1m9153.448ENSCAPG00000013843TFB1M7753.448Cavia_aperea
ENSDARG00000040727tfb1m7630.256ENSCPOG00000009403DIMT15630.412Cavia_porcellus
ENSDARG00000040727tfb1m9974.717ENSCPOG00000030422TFB1M9969.164Cavia_porcellus
ENSDARG00000040727tfb1m9973.208ENSCCAG00000015250TFB1M9967.638Cebus_capucinus
ENSDARG00000040727tfb1m9950.943ENSCATG00000009009TFB1M9850.294Cercocebus_atys
ENSDARG00000040727tfb1m9974.340ENSCLAG00000004500TFB1M9672.036Chinchilla_lanigera
ENSDARG00000040727tfb1m9974.340ENSCSAG00000013259TFB1M9869.388Chlorocebus_sabaeus
ENSDARG00000040727tfb1m9971.053ENSCHOG00000011245TFB1M9966.570Choloepus_hoffmanni
ENSDARG00000040727tfb1m7630.392ENSCPBG00000026823DIMT16230.392Chrysemys_picta_bellii
ENSDARG00000040727tfb1m9675.581ENSCPBG00000016320TFB1M9968.824Chrysemys_picta_bellii
ENSDARG00000040727tfb1m9448.031ENSCING00000003901-7845.364Ciona_intestinalis
ENSDARG00000040727tfb1m9450.000ENSCSAVG00000004721-7947.682Ciona_savignyi
ENSDARG00000040727tfb1m9974.717ENSCANG00000029768TFB1M9970.448Colobus_angolensis_palliatus
ENSDARG00000040727tfb1m9972.453ENSCGRG00001022866Tfb1m9967.055Cricetulus_griseus_chok1gshd
ENSDARG00000040727tfb1m9373.600ENSCGRG00000018084Tfb1m9967.683Cricetulus_griseus_crigri
ENSDARG00000040727tfb1m9880.303ENSCSEG00000000131tfb1m9573.353Cynoglossus_semilaevis
ENSDARG00000040727tfb1m9878.030ENSCVAG00000009201tfb1m9572.239Cyprinodon_variegatus
ENSDARG00000040727tfb1m9970.000ENSDNOG00000015984-9764.873Dasypus_novemcinctus
ENSDARG00000040727tfb1m8762.661ENSDNOG00000032672-9857.092Dasypus_novemcinctus
ENSDARG00000040727tfb1m9972.830ENSDORG00000012938Tfb1m9867.638Dipodomys_ordii
ENSDARG00000040727tfb1m9654.580FBgn0261381mtTFB19550.938Drosophila_melanogaster
ENSDARG00000040727tfb1m9851.394ENSETEG00000005709TFB1M9947.110Echinops_telfairi
ENSDARG00000040727tfb1m9460.079ENSEBUG00000010530tfb1m9355.963Eptatretus_burgeri
ENSDARG00000040727tfb1m5130.075ENSEBUG00000006158dimt1l5230.075Eptatretus_burgeri
ENSDARG00000040727tfb1m7630.256ENSEASG00005010748DIMT16230.256Equus_asinus_asinus
ENSDARG00000040727tfb1m9972.830ENSEASG00005018887TFB1M9470.642Equus_asinus_asinus
ENSDARG00000040727tfb1m9973.208ENSECAG00000020997TFB1M9470.948Equus_caballus
ENSDARG00000040727tfb1m9975.472ENSEEUG00000014899TFB1M9771.865Erinaceus_europaeus
ENSDARG00000040727tfb1m9881.439ENSELUG00000002752tfb1m8578.806Esox_lucius
ENSDARG00000040727tfb1m7630.256ENSFCAG00000026506DIMT15830.814Felis_catus
ENSDARG00000040727tfb1m9973.962ENSFCAG00000038785TFB1M9969.855Felis_catus
ENSDARG00000040727tfb1m7930.516ENSFALG00000011081DIMT16230.516Ficedula_albicollis
ENSDARG00000040727tfb1m9874.242ENSFALG00000012500TFB1M9968.222Ficedula_albicollis
ENSDARG00000040727tfb1m9674.131ENSFDAG00000016985TFB1M9969.501Fukomys_damarensis
ENSDARG00000040727tfb1m9878.788ENSFHEG00000008407tfb1m9474.545Fundulus_heteroclitus
ENSDARG00000040727tfb1m9884.091ENSGMOG00000018738tfb1m9678.144Gadus_morhua
ENSDARG00000040727tfb1m9474.308ENSGALG00000013647TFB1M9965.527Gallus_gallus
ENSDARG00000040727tfb1m7530.693ENSGALG00000020569DIMT16130.516Gallus_gallus
ENSDARG00000040727tfb1m9978.491ENSGAFG00000017997tfb1m9474.848Gambusia_affinis
ENSDARG00000040727tfb1m9878.030ENSGACG00000006884tfb1m9772.222Gasterosteus_aculeatus
ENSDARG00000040727tfb1m6830.233ENSGAGG00000008827DIMT15030.233Gopherus_agassizii
ENSDARG00000040727tfb1m9973.962ENSGAGG00000025345TFB1M10067.826Gopherus_agassizii
ENSDARG00000040727tfb1m7630.303ENSGGOG00000002309DIMT15730.303Gorilla_gorilla
ENSDARG00000040727tfb1m9875.000ENSGGOG00000012189TFB1M9969.971Gorilla_gorilla
ENSDARG00000040727tfb1m9881.439ENSHBUG00000019396tfb1m9674.640Haplochromis_burtoni
ENSDARG00000040727tfb1m9975.094ENSHGLG00000002028TFB1M9870.000Heterocephalus_glaber_female
ENSDARG00000040727tfb1m9975.094ENSHGLG00100001412TFB1M9870.000Heterocephalus_glaber_male
ENSDARG00000040727tfb1m9979.245ENSHCOG00000014135tfb1m9673.512Hippocampus_comes
ENSDARG00000040727tfb1m9880.682ENSIPUG00000010964tfb1m10077.419Ictalurus_punctatus
ENSDARG00000040727tfb1m9973.208ENSSTOG00000026264TFB1M9868.497Ictidomys_tridecemlineatus
ENSDARG00000040727tfb1m9973.585ENSJJAG00000022171Tfb1m9768.222Jaculus_jaculus
ENSDARG00000040727tfb1m9879.545ENSKMAG00000012667tfb1m9574.545Kryptolebias_marmoratus
ENSDARG00000040727tfb1m9878.788ENSLBEG00000011505tfb1m9871.143Labrus_bergylta
ENSDARG00000040727tfb1m9876.515ENSLACG00000012594TFB1M9375.153Latimeria_chalumnae
ENSDARG00000040727tfb1m9870.522ENSLOCG00000016850tfb1m9668.843Lepisosteus_oculatus
ENSDARG00000040727tfb1m9975.094ENSLAFG00000014035-9969.164Loxodonta_africana
ENSDARG00000040727tfb1m9961.567ENSLAFG00000032309-10059.317Loxodonta_africana
ENSDARG00000040727tfb1m9975.094ENSMFAG00000031968TFB1M9869.118Macaca_fascicularis
ENSDARG00000040727tfb1m6830.233ENSMMUG00000000400DIMT15330.233Macaca_mulatta
ENSDARG00000040727tfb1m9975.094ENSMMUG00000011171TFB1M9869.412Macaca_mulatta
ENSDARG00000040727tfb1m9975.094ENSMNEG00000042278TFB1M9869.118Macaca_nemestrina
ENSDARG00000040727tfb1m6830.233ENSMLEG00000027706DIMT15330.233Mandrillus_leucophaeus
ENSDARG00000040727tfb1m9975.094ENSMLEG00000000044TFB1M9770.149Mandrillus_leucophaeus
ENSDARG00000040727tfb1m9879.167ENSMAMG00000009423tfb1m9375.076Mastacembelus_armatus
ENSDARG00000040727tfb1m9881.818ENSMZEG00005005640tfb1m9274.928Maylandia_zebra
ENSDARG00000040727tfb1m7531.188ENSMGAG00000004307DIMT15731.188Meleagris_gallopavo
ENSDARG00000040727tfb1m9675.194ENSMGAG00000012779TFB1M9973.881Meleagris_gallopavo
ENSDARG00000040727tfb1m9973.585ENSMAUG00000006705Tfb1m9470.552Mesocricetus_auratus
ENSDARG00000040727tfb1m9973.585ENSMICG00000045849TFB1M9968.421Microcebus_murinus
ENSDARG00000040727tfb1m9972.830ENSMOCG00000013879Tfb1m9967.251Microtus_ochrogaster
ENSDARG00000040727tfb1m9879.167ENSMMOG00000002203tfb1m9474.405Mola_mola
ENSDARG00000040727tfb1m9972.075ENSMODG00000008169TFB1M9967.251Monodelphis_domestica
ENSDARG00000040727tfb1m9880.682ENSMALG00000011657tfb1m8975.298Monopterus_albus
ENSDARG00000040727tfb1m9972.830MGP_CAROLIEiJ_G0021018Tfb1m9967.836Mus_caroli
ENSDARG00000040727tfb1m9972.830ENSMUSG00000036983Tfb1m9868.843Mus_musculus
ENSDARG00000040727tfb1m9972.830MGP_PahariEiJ_G0023336Tfb1m9967.049Mus_pahari
ENSDARG00000040727tfb1m9972.830MGP_SPRETEiJ_G0021923Tfb1m9868.843Mus_spretus
ENSDARG00000040727tfb1m9973.962ENSMPUG00000002073TFB1M9571.560Mustela_putorius_furo
ENSDARG00000040727tfb1m7630.256ENSMPUG00000007145DIMT15730.256Mustela_putorius_furo
ENSDARG00000040727tfb1m7630.769ENSMLUG00000011740DIMT15730.769Myotis_lucifugus
ENSDARG00000040727tfb1m9973.585ENSMLUG00000011329TFB1M9968.314Myotis_lucifugus
ENSDARG00000040727tfb1m9972.830ENSNGAG00000015154Tfb1m9767.919Nannospalax_galili
ENSDARG00000040727tfb1m9881.061ENSNBRG00000009004tfb1m9674.561Neolamprologus_brichardi
ENSDARG00000040727tfb1m9974.340ENSNLEG00000034352TFB1M9969.971Nomascus_leucogenys
ENSDARG00000040727tfb1m9957.358ENSMEUG00000001699-9955.072Notamacropus_eugenii
ENSDARG00000040727tfb1m9651.765ENSOPRG00000008921TFB1M9951.765Ochotona_princeps
ENSDARG00000040727tfb1m9674.419ENSODEG00000005915TFB1M9471.739Octodon_degus
ENSDARG00000040727tfb1m9881.818ENSONIG00000008109tfb1m10074.640Oreochromis_niloticus
ENSDARG00000040727tfb1m9973.962ENSOCUG00000012154TFB1M9969.501Oryctolagus_cuniculus
ENSDARG00000040727tfb1m9880.303ENSORLG00000017328tfb1m8075.684Oryzias_latipes
ENSDARG00000040727tfb1m9880.682ENSORLG00020002250tfb1m9675.988Oryzias_latipes_hni
ENSDARG00000040727tfb1m9881.061ENSORLG00015016067tfb1m9676.292Oryzias_latipes_hsok
ENSDARG00000040727tfb1m9881.061ENSOMEG00000015641tfb1m9376.900Oryzias_melastigma
ENSDARG00000040727tfb1m7630.256ENSOGAG00000000531DIMT15730.256Otolemur_garnettii
ENSDARG00000040727tfb1m9972.932ENSOGAG00000011681TFB1M9968.023Otolemur_garnettii
ENSDARG00000040727tfb1m9972.325ENSOARG00000004216TFB1M9969.733Ovis_aries
ENSDARG00000040727tfb1m9875.000ENSPPAG00000030834TFB1M9969.971Pan_paniscus
ENSDARG00000040727tfb1m7630.256ENSPPRG00000002058DIMT15730.814Panthera_pardus
ENSDARG00000040727tfb1m9973.585ENSPPRG00000013578TFB1M10069.186Panthera_pardus
ENSDARG00000040727tfb1m7630.256ENSPTIG00000016972DIMT15730.814Panthera_tigris_altaica
ENSDARG00000040727tfb1m9973.585ENSPTIG00000003540TFB1M9969.565Panthera_tigris_altaica
ENSDARG00000040727tfb1m9875.000ENSPTRG00000018730TFB1M9969.679Pan_troglodytes
ENSDARG00000040727tfb1m6830.233ENSPANG00000010901DIMT15330.233Papio_anubis
ENSDARG00000040727tfb1m9975.472ENSPANG00000007489TFB1M9869.118Papio_anubis
ENSDARG00000040727tfb1m9880.303ENSPKIG00000021117tfb1m9576.877Paramormyrops_kingsleyae
ENSDARG00000040727tfb1m6830.233ENSPSIG00000002886DIMT15030.233Pelodiscus_sinensis
ENSDARG00000040727tfb1m9874.621ENSPSIG00000006643TFB1M9869.760Pelodiscus_sinensis
ENSDARG00000040727tfb1m9880.682ENSPMGG00000011289tfb1m9872.701Periophthalmus_magnuspinnatus
ENSDARG00000040727tfb1m9972.453ENSPEMG00000010410Tfb1m9867.953Peromyscus_maniculatus_bairdii
ENSDARG00000040727tfb1m7759.898ENSPMAG00000008056tfb1m8859.898Petromyzon_marinus
ENSDARG00000040727tfb1m9972.830ENSPCIG00000001010TFB1M9467.857Phascolarctos_cinereus
ENSDARG00000040727tfb1m9877.820ENSPFOG00000005139tfb1m9474.699Poecilia_formosa
ENSDARG00000040727tfb1m9878.409ENSPLAG00000021410tfb1m9475.152Poecilia_latipinna
ENSDARG00000040727tfb1m9878.409ENSPMEG00000020166tfb1m9475.152Poecilia_mexicana
ENSDARG00000040727tfb1m9878.030ENSPREG00000022392tfb1m9474.848Poecilia_reticulata
ENSDARG00000040727tfb1m9873.864ENSPPYG00000017123TFB1M10066.860Pongo_abelii
ENSDARG00000040727tfb1m9751.417ENSPCAG00000007078TFB1M9955.892Procavia_capensis
ENSDARG00000040727tfb1m7630.256ENSPCAG00000005220DIMT15730.256Procavia_capensis
ENSDARG00000040727tfb1m9973.962ENSPCOG00000028453TFB1M9969.006Propithecus_coquereli
ENSDARG00000040727tfb1m7630.769ENSPCOG00000017972DIMT15730.769Propithecus_coquereli
ENSDARG00000040727tfb1m9974.340ENSPVAG00000015818TFB1M9571.865Pteropus_vampyrus
ENSDARG00000040727tfb1m9881.818ENSPNYG00000007330tfb1m9674.928Pundamilia_nyererei
ENSDARG00000040727tfb1m9882.197ENSPNAG00000007507tfb1m9778.006Pygocentrus_nattereri
ENSDARG00000040727tfb1m9972.830ENSRNOG00000056223Tfb1m9967.836Rattus_norvegicus
ENSDARG00000040727tfb1m9974.717ENSRBIG00000039975TFB1M9970.448Rhinopithecus_bieti
ENSDARG00000040727tfb1m9974.717ENSRROG00000033802TFB1M9970.149Rhinopithecus_roxellana
ENSDARG00000040727tfb1m9973.962ENSSBOG00000008663TFB1M9968.222Saimiri_boliviensis_boliviensis
ENSDARG00000040727tfb1m9660.887ENSSHAG00000013259TFB1M8764.214Sarcophilus_harrisii
ENSDARG00000040727tfb1m9878.030ENSSFOG00015009739tfb1m9973.410Scleropages_formosus
ENSDARG00000040727tfb1m9880.303ENSSMAG00000008229tfb1m9674.412Scophthalmus_maximus
ENSDARG00000040727tfb1m9879.167ENSSDUG00000011871tfb1m9671.802Seriola_dumerili
ENSDARG00000040727tfb1m9879.545ENSSLDG00000023923tfb1m9274.242Seriola_lalandi_dorsalis
ENSDARG00000040727tfb1m8372.072ENSSARG00000003159TFB1M10072.072Sorex_araneus
ENSDARG00000040727tfb1m9972.453ENSSPUG00000015253TFB1M9966.860Sphenodon_punctatus
ENSDARG00000040727tfb1m7630.882ENSSPUG00000018021DIMT15930.882Sphenodon_punctatus
ENSDARG00000040727tfb1m9880.682ENSSPAG00000019515tfb1m9475.150Stegastes_partitus
ENSDARG00000040727tfb1m9973.208ENSSSCG00000024361TFB1M9969.436Sus_scrofa
ENSDARG00000040727tfb1m9872.727ENSTGUG00000011136TFB1M10065.607Taeniopygia_guttata
ENSDARG00000040727tfb1m7930.986ENSTGUG00000002749DIMT16530.986Taeniopygia_guttata
ENSDARG00000040727tfb1m9879.167ENSTRUG00000020334tfb1m9473.731Takifugu_rubripes
ENSDARG00000040727tfb1m8277.273ENSTNIG00000016882tfb1m9777.626Tetraodon_nigroviridis
ENSDARG00000040727tfb1m7630.256ENSTBEG00000001376DIMT15730.256Tupaia_belangeri
ENSDARG00000040727tfb1m9973.962ENSTBEG00000008769TFB1M9471.254Tupaia_belangeri
ENSDARG00000040727tfb1m9973.585ENSTTRG00000006327TFB1M9771.560Tursiops_truncatus
ENSDARG00000040727tfb1m9973.585ENSUAMG00000017802TFB1M9868.222Ursus_americanus
ENSDARG00000040727tfb1m7630.256ENSUAMG00000012769DIMT15730.256Ursus_americanus
ENSDARG00000040727tfb1m9973.962ENSUMAG00000013377TFB1M9068.222Ursus_maritimus
ENSDARG00000040727tfb1m7630.256ENSUMAG00000008817DIMT15730.256Ursus_maritimus
ENSDARG00000040727tfb1m9872.727ENSVPAG00000010148TFB1M9670.031Vicugna_pacos
ENSDARG00000040727tfb1m9974.717ENSVVUG00000007643TFB1M9869.388Vulpes_vulpes
ENSDARG00000040727tfb1m9972.075ENSXETG00000007852tfb1m9965.116Xenopus_tropicalis
ENSDARG00000040727tfb1m9978.868ENSXCOG00000013230tfb1m9475.455Xiphophorus_couchianus
ENSDARG00000040727tfb1m9978.868ENSXMAG00000019222tfb1m9475.455Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000154rRNA modification-IEAProcess
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity21873635.IBAFunction
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0006364rRNA processing-IEAProcess
GO:0008168methyltransferase activity-IEAFunction
GO:0008649rRNA methyltransferase activity-IEAFunction
GO:0016740transferase activity-IEAFunction
GO:0031167rRNA methylation21873635.IBAProcess
GO:0032259methylation-IEAProcess

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us