EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000040732 (Gene tree)
Gene ID
431719
Gene Symbol
elavl2
Alias
zgc:91918
Full Name
ELAV like neuron-specific RNA binding protein 2
Gene Type
protein_coding
Species
Danio_rerio
Status
confidence
Strand
Minus strand
Length
22310 bases
Position
chr22:38252686-38274995
Accession
ZDB-GENE-040704-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000006457RRM_5PF13893.66.5e-1212
ENSDARP00000006457RRM_5PF13893.66.5e-1222
ENSDARP00000157308RRM_5PF13893.69.6e-1212
ENSDARP00000157308RRM_5PF13893.69.6e-1222
ENSDARP00000114220RRM_5PF13893.69.9e-1212
ENSDARP00000114220RRM_5PF13893.69.9e-1222
ENSDARP00000006457RRM_1PF00076.222.9e-6613
ENSDARP00000006457RRM_1PF00076.222.9e-6623
ENSDARP00000006457RRM_1PF00076.222.9e-6633
ENSDARP00000114220RRM_1PF00076.224.1e-6613
ENSDARP00000114220RRM_1PF00076.224.1e-6623
ENSDARP00000114220RRM_1PF00076.224.1e-6633
ENSDARP00000157308RRM_1PF00076.224.1e-6613
ENSDARP00000157308RRM_1PF00076.224.1e-6623
ENSDARP00000157308RRM_1PF00076.224.1e-6633
ENSDARP00000121083RRM_1PF00076.227.1e-2912
ENSDARP00000121083RRM_1PF00076.227.1e-2922
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
28381614Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transitionpreZGA & embryo2017 Apr 5Despic VDOI: 10.1101/gr.215954.116
28381614Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transitionZGA & embryo2017 Apr 5Despic VDOI: 10.1101/gr.215954.116
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000132516-522-ENSDARP00000121083174 (aa)-Q1MT20
ENSDART00000139420-1689-ENSDARP00000114220388 (aa)-Q1MT19
ENSDART00000015117-1691-ENSDARP00000006457360 (aa)-Q6GQM6
ENSDART00000179786-2539-ENSDARP00000157308389 (aa)-A0A2R8S0A2
Gene Model
Click here to download ENSDARG00000040732's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000040732's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000040732elavl26833.784ENSDARG00000016516rbm8a6132.432
ENSDARG00000040732elavl210038.235ENSDARG00000017219pabpc1a6037.349
ENSDARG00000040732elavl210068.391ENSDARG00000038695elavl1a10067.062
ENSDARG00000040732elavl28335.632ENSDARG00000034668celf3a9930.909
ENSDARG00000040732elavl26237.908ENSDARG00000103823rbms1b8335.912
ENSDARG00000040732elavl29637.037ENSDARG00000070045celf45741.975
ENSDARG00000040732elavl27340.741ENSDARG00000005315celf15640.741
ENSDARG00000040732elavl210082.759ENSDARG00000014420elavl39981.319
ENSDARG00000040732elavl27041.975ENSDARG00000090727celf5b5134.091
ENSDARG00000040732elavl210036.765ENSDARG00000059259pabpc46136.145
ENSDARG00000040732elavl26539.106ENSDARG00000044574rbms39441.353
ENSDARG00000040732elavl28241.975ENSDARG00000071375celf5a6241.975
ENSDARG00000040732elavl27639.506ENSDARG00000002131celf29034.066
ENSDARG00000040732elavl210036.765ENSDARG00000002597pabpc1l6936.145
ENSDARG00000040732elavl28934.615ENSDARG00000026476tia1l7834.615
ENSDARG00000040732elavl26936.410ENSDARG00000074023rbms1a5934.286
ENSDARG00000040732elavl210087.356ENSDARG00000045639elavl49681.606
ENSDARG00000040732elavl27936.508ENSDARG00000006983celf3b6536.508
ENSDARG00000040732elavl210038.235ENSDARG00000021140pabpc1b9931.333
ENSDARG00000040732elavl28934.615ENSDARG00000009525tial17434.615
ENSDARG00000040732elavl210071.264ENSDARG00000101744elavl1b10068.843
ENSDARG00000040732elavl25231.818ENSDARG00000052617raver17531.818
ENSDARG00000040732elavl25338.596ENSDARG00000036162hnrnpa0b6938.596
ENSDARG00000040732elavl25934.328ENSDARG00000032175puf60a5734.328
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000040732elavl210092.529ENSG00000107105ELAVL210091.538Homo_sapiens
ENSDARG00000040732elavl210090.281ENSAPOG00000022121ELAVL210090.281Acanthochromis_polyacanthus
ENSDARG00000040732elavl210091.538ENSAMEG00000007555ELAVL210091.538Ailuropoda_melanoleuca
ENSDARG00000040732elavl210094.857ENSACIG00000010855ELAVL210093.350Amphilophus_citrinellus
ENSDARG00000040732elavl210093.606ENSAOCG00000019468ELAVL210093.606Amphiprion_ocellaris
ENSDARG00000040732elavl210093.606ENSAPEG00000023474ELAVL210093.606Amphiprion_percula
ENSDARG00000040732elavl210092.818ENSATEG00000018073ELAVL210093.075Anabas_testudineus
ENSDARG00000040732elavl210090.488ENSAPLG00000010429ELAVL210090.488Anas_platyrhynchos
ENSDARG00000040732elavl210092.051ENSACAG00000017521ELAVL29492.051Anolis_carolinensis
ENSDARG00000040732elavl210092.000ENSANAG00000032553ELAVL210091.517Aotus_nancymaae
ENSDARG00000040732elavl210093.350ENSACLG00000002715ELAVL210093.350Astatotilapia_calliptera
ENSDARG00000040732elavl210093.590ENSAMXG00000036990ELAVL210093.590Astyanax_mexicanus
ENSDARG00000040732elavl210092.529ENSBTAG00000046348ELAVL210091.538Bos_taurus
ENSDARG00000040732elavl210092.000ENSCJAG00000008064ELAVL210091.538Callithrix_jacchus
ENSDARG00000040732elavl210091.517ENSCAFG00000001688ELAVL210091.517Canis_familiaris
ENSDARG00000040732elavl210092.000ENSCAFG00020013836ELAVL210091.538Canis_lupus_dingo
ENSDARG00000040732elavl210092.529ENSCHIG00000025894ELAVL210091.517Capra_hircus
ENSDARG00000040732elavl210092.000ENSTSYG00000013066ELAVL210091.538Carlito_syrichta
ENSDARG00000040732elavl210088.506ENSCAPG00000003609ELAVL210088.387Cavia_aperea
ENSDARG00000040732elavl210092.000ENSCPOG00000010472ELAVL210091.538Cavia_porcellus
ENSDARG00000040732elavl210092.000ENSCCAG00000024508ELAVL210091.538Cebus_capucinus
ENSDARG00000040732elavl210092.000ENSCATG00000012522ELAVL210091.538Cercocebus_atys
ENSDARG00000040732elavl210092.000ENSCLAG00000003388ELAVL210091.538Chinchilla_lanigera
ENSDARG00000040732elavl210091.517ENSCSAG00000009718ELAVL210091.517Chlorocebus_sabaeus
ENSDARG00000040732elavl29393.388ENSCHOG00000000635ELAVL28093.388Choloepus_hoffmanni
ENSDARG00000040732elavl210092.571ENSCPBG00000007841ELAVL210092.051Chrysemys_picta_bellii
ENSDARG00000040732elavl210052.055ENSCING00000004712-9858.808Ciona_intestinalis
ENSDARG00000040732elavl210060.989ENSCSAVG00000003440-10064.286Ciona_savignyi
ENSDARG00000040732elavl210092.529ENSCANG00000043179ELAVL210091.538Colobus_angolensis_palliatus
ENSDARG00000040732elavl210092.529ENSCGRG00001024409Elavl210091.538Cricetulus_griseus_chok1gshd
ENSDARG00000040732elavl210092.529ENSCGRG00000000487Elavl210091.538Cricetulus_griseus_crigri
ENSDARG00000040732elavl210093.606ENSCSEG00000006335elavl210093.606Cynoglossus_semilaevis
ENSDARG00000040732elavl210094.857ENSCVAG00000013913ELAVL210093.095Cyprinodon_variegatus
ENSDARG00000040732elavl210091.538ENSDNOG00000035657ELAVL210091.538Dasypus_novemcinctus
ENSDARG00000040732elavl210092.000ENSDORG00000010437Elavl210091.538Dipodomys_ordii
ENSDARG00000040732elavl210062.842FBgn0086675fne9564.535Drosophila_melanogaster
ENSDARG00000040732elavl210054.822FBgn0010263Rbp98160.955Drosophila_melanogaster
ENSDARG00000040732elavl210091.260ENSETEG00000006134ELAVL210091.260Echinops_telfairi
ENSDARG00000040732elavl210086.782ENSEBUG00000008179-10082.656Eptatretus_burgeri
ENSDARG00000040732elavl210064.000ENSEBUG00000000352-9564.798Eptatretus_burgeri
ENSDARG00000040732elavl29683.217ENSEBUG00000016008elavl29783.509Eptatretus_burgeri
ENSDARG00000040732elavl210091.517ENSEASG00005004697ELAVL210091.517Equus_asinus_asinus
ENSDARG00000040732elavl210092.529ENSECAG00000020142ELAVL210091.517Equus_caballus
ENSDARG00000040732elavl210086.559ENSEEUG00000008733ELAVL210077.121Erinaceus_europaeus
ENSDARG00000040732elavl210093.606ENSELUG00000010026ELAVL210093.606Esox_lucius
ENSDARG00000040732elavl210092.529ENSFCAG00000011976ELAVL210091.517Felis_catus
ENSDARG00000040732elavl210090.488ENSFALG00000007363ELAVL210090.488Ficedula_albicollis
ENSDARG00000040732elavl210092.000ENSFDAG00000018820ELAVL210091.517Fukomys_damarensis
ENSDARG00000040732elavl210090.026ENSFHEG00000010307ELAVL210090.026Fundulus_heteroclitus
ENSDARG00000040732elavl210092.818ENSGMOG00000011182ELAVL210092.818Gadus_morhua
ENSDARG00000040732elavl210090.286ENSGALG00000015799ELAVL210090.000Gallus_gallus
ENSDARG00000040732elavl210093.095ENSGAFG00000016517ELAVL29293.095Gambusia_affinis
ENSDARG00000040732elavl210094.857ENSGACG00000019484elavl210093.370Gasterosteus_aculeatus
ENSDARG00000040732elavl25882.178ENSGAGG00000005858-9982.456Gopherus_agassizii
ENSDARG00000040732elavl210092.051ENSGAGG00000022382ELAVL210092.051Gopherus_agassizii
ENSDARG00000040732elavl210092.000ENSGGOG00000003678ELAVL210091.538Gorilla_gorilla
ENSDARG00000040732elavl210093.350ENSHBUG00000005968ELAVL210093.350Haplochromis_burtoni
ENSDARG00000040732elavl210092.529ENSHGLG00000005423ELAVL210091.517Heterocephalus_glaber_female
ENSDARG00000040732elavl210092.529ENSHGLG00100002344ELAVL210091.517Heterocephalus_glaber_male
ENSDARG00000040732elavl210087.468ENSHCOG00000005961elavl210087.468Hippocampus_comes
ENSDARG00000040732elavl29793.651ENSIPUG00000012337elavl29493.651Ictalurus_punctatus
ENSDARG00000040732elavl210092.000ENSSTOG00000007792ELAVL210091.517Ictidomys_tridecemlineatus
ENSDARG00000040732elavl210092.000ENSJJAG00000008247Elavl210091.538Jaculus_jaculus
ENSDARG00000040732elavl210093.370ENSKMAG00000006299ELAVL210093.350Kryptolebias_marmoratus
ENSDARG00000040732elavl210094.857ENSLBEG00000027924ELAVL210093.606Labrus_bergylta
ENSDARG00000040732elavl210091.517ENSLACG00000010888ELAVL210091.517Latimeria_chalumnae
ENSDARG00000040732elavl210093.350ENSLOCG00000012575ELAVL210093.350Lepisosteus_oculatus
ENSDARG00000040732elavl210091.538ENSLAFG00000009938ELAVL210091.538Loxodonta_africana
ENSDARG00000040732elavl210092.000ENSMFAG00000039694ELAVL210091.517Macaca_fascicularis
ENSDARG00000040732elavl210092.000ENSMMUG00000010038ELAVL210091.538Macaca_mulatta
ENSDARG00000040732elavl210092.529ENSMNEG00000032526ELAVL210091.538Macaca_nemestrina
ENSDARG00000040732elavl25893.069ENSMLEG00000027781-10093.913Mandrillus_leucophaeus
ENSDARG00000040732elavl210092.265ENSMAMG00000004806ELAVL210092.521Mastacembelus_armatus
ENSDARG00000040732elavl210093.350ENSMZEG00005000778ELAVL210093.350Maylandia_zebra
ENSDARG00000040732elavl29759.722ENSMGAG00000008665ELAVL210059.930Meleagris_gallopavo
ENSDARG00000040732elavl210092.000ENSMAUG00000011955Elavl210091.795Mesocricetus_auratus
ENSDARG00000040732elavl210092.000ENSMICG00000001558ELAVL210091.538Microcebus_murinus
ENSDARG00000040732elavl210092.000ENSMOCG00000016960Elavl210091.795Microtus_ochrogaster
ENSDARG00000040732elavl210093.094ENSMMOG00000012031ELAVL210093.094Mola_mola
ENSDARG00000040732elavl210092.051ENSMODG00000003936ELAVL210092.051Monodelphis_domestica
ENSDARG00000040732elavl210095.402ENSMALG00000003411elavl29693.333Monopterus_albus
ENSDARG00000040732elavl210092.000MGP_CAROLIEiJ_G0026159Elavl210091.795Mus_caroli
ENSDARG00000040732elavl210092.529ENSMUSG00000008489Elavl210091.795Mus_musculus
ENSDARG00000040732elavl210092.000MGP_PahariEiJ_G0028496Elavl210091.795Mus_pahari
ENSDARG00000040732elavl210092.000MGP_SPRETEiJ_G0027124Elavl210091.795Mus_spretus
ENSDARG00000040732elavl210091.517ENSMPUG00000015967ELAVL210091.517Mustela_putorius_furo
ENSDARG00000040732elavl210087.701ENSMLUG00000014210ELAVL29887.863Myotis_lucifugus
ENSDARG00000040732elavl210092.000ENSNGAG00000014535Elavl210091.538Nannospalax_galili
ENSDARG00000040732elavl210087.356ENSNBRG00000023764-9390.391Neolamprologus_brichardi
ENSDARG00000040732elavl210094.857ENSNBRG00000010284ELAVL210081.593Neolamprologus_brichardi
ENSDARG00000040732elavl210092.529ENSNLEG00000016382ELAVL210091.538Nomascus_leucogenys
ENSDARG00000040732elavl210086.096ENSMEUG00000006499ELAVL210083.033Notamacropus_eugenii
ENSDARG00000040732elavl210091.260ENSOPRG00000012874ELAVL210091.260Ochotona_princeps
ENSDARG00000040732elavl210092.529ENSODEG00000002531ELAVL210090.833Octodon_degus
ENSDARG00000040732elavl210091.328ENSONIG00000007552ELAVL210091.444Oreochromis_niloticus
ENSDARG00000040732elavl210086.701ENSOANG00000009634ELAVL29786.701Ornithorhynchus_anatinus
ENSDARG00000040732elavl210091.517ENSOCUG00000005891ELAVL210091.517Oryctolagus_cuniculus
ENSDARG00000040732elavl210093.606ENSORLG00000004217ELAVL210093.606Oryzias_latipes
ENSDARG00000040732elavl210094.857ENSORLG00020016040ELAVL210093.606Oryzias_latipes_hni
ENSDARG00000040732elavl210095.402ENSORLG00015013661ELAVL210093.606Oryzias_latipes_hsok
ENSDARG00000040732elavl210093.606ENSOMEG00000005178ELAVL210093.606Oryzias_melastigma
ENSDARG00000040732elavl29887.697ENSOGAG00000016228ELAVL29888.162Otolemur_garnettii
ENSDARG00000040732elavl210091.517ENSOARG00000014465ELAVL210091.517Ovis_aries
ENSDARG00000040732elavl210092.000ENSPPAG00000041539ELAVL210091.538Pan_paniscus
ENSDARG00000040732elavl210092.529ENSPPRG00000018510ELAVL210091.538Panthera_pardus
ENSDARG00000040732elavl210092.529ENSPTIG00000005627ELAVL210091.538Panthera_tigris_altaica
ENSDARG00000040732elavl210092.000ENSPTRG00000020830ELAVL210091.517Pan_troglodytes
ENSDARG00000040732elavl210092.000ENSPANG00000025263ELAVL210091.517Papio_anubis
ENSDARG00000040732elavl210092.564ENSPKIG00000001903-10092.564Paramormyrops_kingsleyae
ENSDARG00000040732elavl210093.095ENSPKIG00000006187ELAVL210093.095Paramormyrops_kingsleyae
ENSDARG00000040732elavl29695.177ENSPSIG00000015330ELAVL210095.177Pelodiscus_sinensis
ENSDARG00000040732elavl210093.075ENSPMGG00000022018elavl210093.075Periophthalmus_magnuspinnatus
ENSDARG00000040732elavl210092.000ENSPEMG00000014101Elavl210091.795Peromyscus_maniculatus_bairdii
ENSDARG00000040732elavl210092.529ENSPCIG00000011696ELAVL210091.795Phascolarctos_cinereus
ENSDARG00000040732elavl210093.370ENSPFOG00000003436ELAVL29293.350Poecilia_formosa
ENSDARG00000040732elavl210093.370ENSPLAG00000005203ELAVL210093.094Poecilia_latipinna
ENSDARG00000040732elavl210094.857ENSPMEG00000021929ELAVL210090.026Poecilia_mexicana
ENSDARG00000040732elavl210093.370ENSPREG00000017160ELAVL210093.350Poecilia_reticulata
ENSDARG00000040732elavl210091.517ENSPPYG00000019166ELAVL210091.517Pongo_abelii
ENSDARG00000040732elavl210088.175ENSPCAG00000014998ELAVL210088.175Procavia_capensis
ENSDARG00000040732elavl210092.529ENSPCOG00000022819ELAVL210091.538Propithecus_coquereli
ENSDARG00000040732elavl210091.260ENSPVAG00000002688ELAVL210091.260Pteropus_vampyrus
ENSDARG00000040732elavl210095.402ENSPNYG00000001514ELAVL210093.350Pundamilia_nyererei
ENSDARG00000040732elavl210093.590ENSPNAG00000029068ELAVL210093.590Pygocentrus_nattereri
ENSDARG00000040732elavl210092.000ENSRNOG00000006853Elavl210091.774Rattus_norvegicus
ENSDARG00000040732elavl210092.529ENSRBIG00000029495ELAVL210091.538Rhinopithecus_bieti
ENSDARG00000040732elavl210092.529ENSRROG00000041782ELAVL210091.538Rhinopithecus_roxellana
ENSDARG00000040732elavl210092.000ENSSBOG00000028114ELAVL210091.517Saimiri_boliviensis_boliviensis
ENSDARG00000040732elavl210092.000ENSSHAG00000006756ELAVL210087.535Sarcophilus_harrisii
ENSDARG00000040732elavl210088.491ENSSFOG00015001257ELAVL210088.491Scleropages_formosus
ENSDARG00000040732elavl210093.606ENSSFOG00015018252elavl210093.606Scleropages_formosus
ENSDARG00000040732elavl210093.606ENSSMAG00000010745ELAVL210093.606Scophthalmus_maximus
ENSDARG00000040732elavl210093.606ENSSDUG00000008140ELAVL210093.606Seriola_dumerili
ENSDARG00000040732elavl210093.370ENSSLDG00000008455ELAVL210093.370Seriola_lalandi_dorsalis
ENSDARG00000040732elavl210091.260ENSSARG00000005702ELAVL210091.260Sorex_araneus
ENSDARG00000040732elavl210091.413ENSSPUG00000001246ELAVL210091.413Sphenodon_punctatus
ENSDARG00000040732elavl210093.370ENSSPAG00000002388ELAVL210093.370Stegastes_partitus
ENSDARG00000040732elavl210091.517ENSSSCG00000005130ELAVL210091.517Sus_scrofa
ENSDARG00000040732elavl29982.796ENSTGUG00000001349ELAVL29982.979Taeniopygia_guttata
ENSDARG00000040732elavl210092.798ENSTNIG00000011312elavl29792.877Tetraodon_nigroviridis
ENSDARG00000040732elavl210080.214ENSTBEG00000017759ELAVL210079.949Tupaia_belangeri
ENSDARG00000040732elavl210091.003ENSTTRG00000011656ELAVL210091.003Tursiops_truncatus
ENSDARG00000040732elavl210092.000ENSUAMG00000018679ELAVL210091.538Ursus_americanus
ENSDARG00000040732elavl210092.000ENSUMAG00000005644ELAVL210091.538Ursus_maritimus
ENSDARG00000040732elavl210091.260ENSVPAG00000005109ELAVL210091.260Vicugna_pacos
ENSDARG00000040732elavl210092.529ENSVVUG00000021291ELAVL210091.517Vulpes_vulpes
ENSDARG00000040732elavl210091.429ENSXETG00000009387elavl210091.049Xenopus_tropicalis
ENSDARG00000040732elavl210094.286ENSXCOG00000002464ELAVL29989.503Xiphophorus_couchianus
ENSDARG00000040732elavl210093.095ENSXMAG00000029211ELAVL29293.095Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0003730mRNA 3'-UTR binding24735541.IDAFunction
GO:0005575cellular_component-NDComponent

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