EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000041217 (Gene tree)
Gene ID: 333980
Gene Symbol: xpo6
Alias: Ranbp20|fi24f12|wu:fi24f12
Full Name: exportin 6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 46145 bases
Position: chr3:15085294-15131438
Accession: ZDB-GENE-030131-5912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115069	Xpo1	PF08389.12	1.7e-22	1	1
ENSDARP00000115069	IBN_N	PF03810.19	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000138328	-	3834	-	ENSDARP00000115069	1097 (aa)	-	E9QHL9
ENSDART00000131720	-	469	-	ENSDARP00000124078	1 (aa)	-	UPI0000055EF8

Gene Model

Click here to download ENSDARG00000041217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000041217's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000041217	xpo6	99	71.993	ENSG00000169180	XPO6	100	85.714	Homo_sapiens
ENSDARG00000041217	xpo6	99	77.333	ENSAPOG00000012873	xpo6	97	77.333	Acanthochromis_polyacanthus
ENSDARG00000041217	xpo6	99	71.544	ENSAMEG00000011014	XPO6	97	71.544	Ailuropoda_melanoleuca
ENSDARG00000041217	xpo6	99	76.054	ENSACIG00000008055	xpo6	97	76.054	Amphilophus_citrinellus
ENSDARG00000041217	xpo6	99	77.422	ENSAOCG00000001326	xpo6	97	77.422	Amphiprion_ocellaris
ENSDARG00000041217	xpo6	99	77.333	ENSAPEG00000016304	xpo6	97	77.333	Amphiprion_percula
ENSDARG00000041217	xpo6	99	77.019	ENSATEG00000002273	xpo6	97	77.019	Anabas_testudineus
ENSDARG00000041217	xpo6	99	72.197	ENSAPLG00000007480	XPO6	97	72.262	Anas_platyrhynchos
ENSDARG00000041217	xpo6	99	63.993	ENSACAG00000016883	XPO6	97	64.050	Anolis_carolinensis
ENSDARG00000041217	xpo6	99	71.544	ENSANAG00000031761	XPO6	97	71.544	Aotus_nancymaae
ENSDARG00000041217	xpo6	99	76.089	ENSACLG00000007048	xpo6	97	76.089	Astatotilapia_calliptera
ENSDARG00000041217	xpo6	99	92.427	ENSAMXG00000032539	xpo6	97	92.427	Astyanax_mexicanus
ENSDARG00000041217	xpo6	99	71.903	ENSBTAG00000010309	XPO6	97	71.903	Bos_taurus
ENSDARG00000041217	xpo6	99	71.724	ENSCJAG00000006014	XPO6	97	71.724	Callithrix_jacchus
ENSDARG00000041217	xpo6	99	71.903	ENSCAFG00000017356	XPO6	97	71.903	Canis_familiaris
ENSDARG00000041217	xpo6	99	71.903	ENSCAFG00020011808	XPO6	100	71.735	Canis_lupus_dingo
ENSDARG00000041217	xpo6	99	71.903	ENSCHIG00000022341	XPO6	97	71.903	Capra_hircus
ENSDARG00000041217	xpo6	99	68.996	ENSTSYG00000012249	XPO6	98	68.996	Carlito_syrichta
ENSDARG00000041217	xpo6	99	72.083	ENSCPOG00000012824	XPO6	97	72.083	Cavia_porcellus
ENSDARG00000041217	xpo6	99	71.544	ENSCCAG00000036360	XPO6	97	71.544	Cebus_capucinus
ENSDARG00000041217	xpo6	99	71.813	ENSCATG00000034030	XPO6	97	71.813	Cercocebus_atys
ENSDARG00000041217	xpo6	99	71.903	ENSCLAG00000012270	XPO6	97	71.903	Chinchilla_lanigera
ENSDARG00000041217	xpo6	91	70.293	ENSCHOG00000004369	XPO6	89	70.293	Choloepus_hoffmanni
ENSDARG00000041217	xpo6	91	70.710	ENSCPBG00000024660	XPO6	98	76.471	Chrysemys_picta_bellii
ENSDARG00000041217	xpo6	99	42.693	ENSCING00000006884	-	97	41.895	Ciona_intestinalis
ENSDARG00000041217	xpo6	99	42.668	ENSCSAVG00000000850	-	97	41.961	Ciona_savignyi
ENSDARG00000041217	xpo6	99	71.813	ENSCANG00000041578	XPO6	97	71.813	Colobus_angolensis_palliatus
ENSDARG00000041217	xpo6	99	71.634	ENSCGRG00001013173	Xpo6	97	71.634	Cricetulus_griseus_chok1gshd
ENSDARG00000041217	xpo6	99	75.538	ENSCSEG00000013622	xpo6	97	75.644	Cynoglossus_semilaevis
ENSDARG00000041217	xpo6	99	76.203	ENSCVAG00000017399	xpo6	98	75.717	Cyprinodon_variegatus
ENSDARG00000041217	xpo6	99	71.544	ENSDNOG00000012449	XPO6	97	71.544	Dasypus_novemcinctus
ENSDARG00000041217	xpo6	99	71.544	ENSDORG00000000919	Xpo6	97	71.544	Dipodomys_ordii
ENSDARG00000041217	xpo6	82	74.131	ENSETEG00000018768	XPO6	82	74.131	Echinops_telfairi
ENSDARG00000041217	xpo6	99	57.502	ENSEBUG00000015560	xpo6	99	55.556	Eptatretus_burgeri
ENSDARG00000041217	xpo6	99	71.813	ENSEASG00005017296	XPO6	97	71.813	Equus_asinus_asinus
ENSDARG00000041217	xpo6	99	71.724	ENSECAG00000008601	XPO6	97	71.724	Equus_caballus
ENSDARG00000041217	xpo6	97	65.865	ENSEEUG00000014587	XPO6	97	65.865	Erinaceus_europaeus
ENSDARG00000041217	xpo6	99	77.431	ENSELUG00000009159	xpo6	97	77.431	Esox_lucius
ENSDARG00000041217	xpo6	99	71.993	ENSFCAG00000010309	XPO6	97	71.993	Felis_catus
ENSDARG00000041217	xpo6	99	72.108	ENSFALG00000004441	XPO6	95	72.801	Ficedula_albicollis
ENSDARG00000041217	xpo6	99	71.724	ENSFDAG00000012689	XPO6	97	71.724	Fukomys_damarensis
ENSDARG00000041217	xpo6	99	75.779	ENSFHEG00000021190	xpo6	97	75.647	Fundulus_heteroclitus
ENSDARG00000041217	xpo6	99	72.043	ENSGALG00000035360	XPO6	97	72.108	Gallus_gallus
ENSDARG00000041217	xpo6	99	76.450	ENSGAFG00000004044	xpo6	97	76.450	Gambusia_affinis
ENSDARG00000041217	xpo6	97	71.599	ENSGAGG00000022738	XPO6	100	71.783	Gopherus_agassizii
ENSDARG00000041217	xpo6	99	71.993	ENSGGOG00000005609	XPO6	97	71.993	Gorilla_gorilla
ENSDARG00000041217	xpo6	99	76.089	ENSHBUG00000019504	xpo6	97	76.089	Haplochromis_burtoni
ENSDARG00000041217	xpo6	99	71.685	ENSHGLG00000009679	-	97	71.685	Heterocephalus_glaber_female
ENSDARG00000041217	xpo6	93	59.777	ENSHGLG00000003865	-	98	59.777	Heterocephalus_glaber_female
ENSDARG00000041217	xpo6	93	62.003	ENSHGLG00100001081	-	98	62.003	Heterocephalus_glaber_male
ENSDARG00000041217	xpo6	99	71.685	ENSHGLG00100003673	-	97	71.685	Heterocephalus_glaber_male
ENSDARG00000041217	xpo6	99	75.801	ENSHCOG00000004987	xpo6	97	75.890	Hippocampus_comes
ENSDARG00000041217	xpo6	99	90.693	ENSIPUG00000006516	xpo6	97	90.693	Ictalurus_punctatus
ENSDARG00000041217	xpo6	99	71.634	ENSSTOG00000012161	XPO6	97	71.634	Ictidomys_tridecemlineatus
ENSDARG00000041217	xpo6	99	71.634	ENSJJAG00000019392	Xpo6	97	71.634	Jaculus_jaculus
ENSDARG00000041217	xpo6	99	76.827	ENSKMAG00000010403	xpo6	97	76.827	Kryptolebias_marmoratus
ENSDARG00000041217	xpo6	99	76.267	ENSLBEG00000023039	xpo6	98	76.075	Labrus_bergylta
ENSDARG00000041217	xpo6	99	71.069	ENSLACG00000017930	XPO6	97	71.069	Latimeria_chalumnae
ENSDARG00000041217	xpo6	97	75.668	ENSLOCG00000003304	xpo6	100	75.668	Lepisosteus_oculatus
ENSDARG00000041217	xpo6	99	71.005	ENSLAFG00000011960	XPO6	97	71.005	Loxodonta_africana
ENSDARG00000041217	xpo6	99	71.813	ENSMFAG00000045067	XPO6	97	71.813	Macaca_fascicularis
ENSDARG00000041217	xpo6	99	71.813	ENSMMUG00000018623	XPO6	97	71.813	Macaca_mulatta
ENSDARG00000041217	xpo6	99	71.813	ENSMNEG00000028587	XPO6	97	71.813	Macaca_nemestrina
ENSDARG00000041217	xpo6	99	71.813	ENSMLEG00000029685	XPO6	97	71.813	Mandrillus_leucophaeus
ENSDARG00000041217	xpo6	99	76.813	ENSMAMG00000001351	xpo6	98	76.813	Mastacembelus_armatus
ENSDARG00000041217	xpo6	99	76.178	ENSMZEG00005010620	xpo6	97	76.178	Maylandia_zebra
ENSDARG00000041217	xpo6	99	71.582	ENSMGAG00000009566	XPO6	99	71.646	Meleagris_gallopavo
ENSDARG00000041217	xpo6	99	64.144	ENSMAUG00000012539	Xpo6	98	64.253	Mesocricetus_auratus
ENSDARG00000041217	xpo6	99	71.903	ENSMICG00000001923	XPO6	97	71.903	Microcebus_murinus
ENSDARG00000041217	xpo6	99	71.634	ENSMOCG00000008015	Xpo6	97	71.634	Microtus_ochrogaster
ENSDARG00000041217	xpo6	99	76.370	ENSMMOG00000011992	xpo6	97	76.370	Mola_mola
ENSDARG00000041217	xpo6	99	71.993	ENSMODG00000015516	XPO6	97	71.993	Monodelphis_domestica
ENSDARG00000041217	xpo6	99	68.694	ENSMALG00000020612	xpo6	97	69.018	Monopterus_albus
ENSDARG00000041217	xpo6	99	71.364	MGP_CAROLIEiJ_G0030439	Xpo6	97	71.364	Mus_caroli
ENSDARG00000041217	xpo6	99	71.544	ENSMUSG00000000131	Xpo6	97	71.544	Mus_musculus
ENSDARG00000041217	xpo6	99	71.364	MGP_PahariEiJ_G0013649	Xpo6	97	71.364	Mus_pahari
ENSDARG00000041217	xpo6	99	71.544	MGP_SPRETEiJ_G0031553	Xpo6	97	71.544	Mus_spretus
ENSDARG00000041217	xpo6	99	71.544	ENSMPUG00000012920	XPO6	95	71.544	Mustela_putorius_furo
ENSDARG00000041217	xpo6	99	71.275	ENSMLUG00000012970	XPO6	97	71.275	Myotis_lucifugus
ENSDARG00000041217	xpo6	99	71.454	ENSNGAG00000012740	Xpo6	97	71.454	Nannospalax_galili
ENSDARG00000041217	xpo6	99	76.178	ENSNBRG00000007275	xpo6	97	76.178	Neolamprologus_brichardi
ENSDARG00000041217	xpo6	99	71.993	ENSNLEG00000011518	XPO6	97	71.993	Nomascus_leucogenys
ENSDARG00000041217	xpo6	80	73.973	ENSOPRG00000009278	XPO6	78	73.973	Ochotona_princeps
ENSDARG00000041217	xpo6	99	72.083	ENSODEG00000012917	XPO6	97	72.083	Octodon_degus
ENSDARG00000041217	xpo6	99	76.089	ENSONIG00000019366	xpo6	97	76.089	Oreochromis_niloticus
ENSDARG00000041217	xpo6	99	71.724	ENSOCUG00000002727	XPO6	97	71.724	Oryctolagus_cuniculus
ENSDARG00000041217	xpo6	99	75.223	ENSORLG00000011231	xpo6	98	74.688	Oryzias_latipes
ENSDARG00000041217	xpo6	99	75.401	ENSORLG00020000386	xpo6	97	75.401	Oryzias_latipes_hni
ENSDARG00000041217	xpo6	99	75.401	ENSORLG00015003636	xpo6	97	75.401	Oryzias_latipes_hsok
ENSDARG00000041217	xpo6	99	75.312	ENSOMEG00000016505	xpo6	98	74.377	Oryzias_melastigma
ENSDARG00000041217	xpo6	99	71.993	ENSOGAG00000012844	XPO6	97	71.993	Otolemur_garnettii
ENSDARG00000041217	xpo6	99	71.903	ENSOARG00000000960	XPO6	97	71.903	Ovis_aries
ENSDARG00000041217	xpo6	99	71.903	ENSPPAG00000033668	XPO6	97	71.903	Pan_paniscus
ENSDARG00000041217	xpo6	99	71.813	ENSPPRG00000001454	XPO6	98	71.813	Panthera_pardus
ENSDARG00000041217	xpo6	97	71.323	ENSPTIG00000016663	XPO6	97	71.323	Panthera_tigris_altaica
ENSDARG00000041217	xpo6	99	71.903	ENSPTRG00000007919	XPO6	97	71.903	Pan_troglodytes
ENSDARG00000041217	xpo6	99	71.813	ENSPANG00000017103	XPO6	97	71.813	Papio_anubis
ENSDARG00000041217	xpo6	99	74.639	ENSPKIG00000022550	xpo6	97	74.639	Paramormyrops_kingsleyae
ENSDARG00000041217	xpo6	99	70.968	ENSPSIG00000018225	XPO6	98	70.968	Pelodiscus_sinensis
ENSDARG00000041217	xpo6	99	75.269	ENSPMGG00000014436	xpo6	98	75.269	Periophthalmus_magnuspinnatus
ENSDARG00000041217	xpo6	99	71.634	ENSPEMG00000012100	Xpo6	97	71.634	Peromyscus_maniculatus_bairdii
ENSDARG00000041217	xpo6	99	65.952	ENSPMAG00000003127	xpo6	97	65.952	Petromyzon_marinus
ENSDARG00000041217	xpo6	97	71.731	ENSPCIG00000003863	XPO6	100	71.731	Phascolarctos_cinereus
ENSDARG00000041217	xpo6	99	77.195	ENSPFOG00000008763	xpo6	97	77.195	Poecilia_formosa
ENSDARG00000041217	xpo6	99	76.182	ENSPLAG00000014054	xpo6	97	76.182	Poecilia_latipinna
ENSDARG00000041217	xpo6	99	76.182	ENSPMEG00000018994	xpo6	97	76.182	Poecilia_mexicana
ENSDARG00000041217	xpo6	99	76.224	ENSPREG00000016421	xpo6	96	76.093	Poecilia_reticulata
ENSDARG00000041217	xpo6	99	71.993	ENSPPYG00000007218	XPO6	97	71.993	Pongo_abelii
ENSDARG00000041217	xpo6	90	74.709	ENSPCAG00000008918	XPO6	87	74.709	Procavia_capensis
ENSDARG00000041217	xpo6	99	71.993	ENSPCOG00000017886	XPO6	97	71.993	Propithecus_coquereli
ENSDARG00000041217	xpo6	78	78.378	ENSPVAG00000012234	XPO6	76	78.378	Pteropus_vampyrus
ENSDARG00000041217	xpo6	99	76.089	ENSPNYG00000008375	xpo6	97	76.089	Pundamilia_nyererei
ENSDARG00000041217	xpo6	99	92.252	ENSPNAG00000008284	xpo6	97	92.252	Pygocentrus_nattereri
ENSDARG00000041217	xpo6	99	71.275	ENSRNOG00000016722	Xpo6	97	71.275	Rattus_norvegicus
ENSDARG00000041217	xpo6	99	71.813	ENSRBIG00000031469	XPO6	97	71.813	Rhinopithecus_bieti
ENSDARG00000041217	xpo6	99	71.813	ENSRROG00000044864	XPO6	97	71.813	Rhinopithecus_roxellana
ENSDARG00000041217	xpo6	99	71.544	ENSSBOG00000027650	XPO6	97	71.544	Saimiri_boliviensis_boliviensis
ENSDARG00000041217	xpo6	99	71.813	ENSSHAG00000013864	XPO6	97	71.813	Sarcophilus_harrisii
ENSDARG00000041217	xpo6	99	72.197	ENSSFOG00015009347	xpo6	97	72.442	Scleropages_formosus
ENSDARG00000041217	xpo6	99	76.622	ENSSMAG00000010566	xpo6	97	76.622	Scophthalmus_maximus
ENSDARG00000041217	xpo6	99	77.509	ENSSDUG00000017294	xpo6	98	77.370	Seriola_dumerili
ENSDARG00000041217	xpo6	99	77.422	ENSSLDG00000006580	xpo6	98	77.370	Seriola_lalandi_dorsalis
ENSDARG00000041217	xpo6	93	69.648	ENSSARG00000013120	XPO6	90	69.648	Sorex_araneus
ENSDARG00000041217	xpo6	99	72.172	ENSSPUG00000009217	XPO6	97	73.669	Sphenodon_punctatus
ENSDARG00000041217	xpo6	99	77.333	ENSSPAG00000009469	xpo6	98	77.240	Stegastes_partitus
ENSDARG00000041217	xpo6	99	71.813	ENSSSCG00000007812	XPO6	98	71.813	Sus_scrofa
ENSDARG00000041217	xpo6	87	71.385	ENSTGUG00000003781	XPO6	97	71.458	Taeniopygia_guttata
ENSDARG00000041217	xpo6	99	76.313	ENSTRUG00000004696	xpo6	98	75.758	Takifugu_rubripes
ENSDARG00000041217	xpo6	99	77.199	ENSTNIG00000018949	xpo6	97	77.379	Tetraodon_nigroviridis
ENSDARG00000041217	xpo6	93	79.612	ENSTBEG00000009945	XPO6	88	79.612	Tupaia_belangeri
ENSDARG00000041217	xpo6	99	71.185	ENSTTRG00000009558	XPO6	97	71.185	Tursiops_truncatus
ENSDARG00000041217	xpo6	99	71.559	ENSUMAG00000007086	XPO6	98	71.559	Ursus_maritimus
ENSDARG00000041217	xpo6	91	78.378	ENSVPAG00000008493	XPO6	91	78.378	Vicugna_pacos
ENSDARG00000041217	xpo6	99	71.903	ENSVVUG00000024150	XPO6	97	71.903	Vulpes_vulpes
ENSDARG00000041217	xpo6	99	69.362	ENSXETG00000010326	xpo6	97	69.362	Xenopus_tropicalis
ENSDARG00000041217	xpo6	99	76.271	ENSXMAG00000011630	xpo6	97	76.271	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006611	protein export from nucleus	-	IEA	Process
GO:0006611	protein export from nucleus	-	ISS	Process
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0008536	Ran GTPase binding	-	IEA	Function
GO:0008565	protein transporter activity	-	IEA	Function
GO:0015031	protein transport	-	IEA	Process