EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000041232 (Gene tree)
Gene ID: 405889
Gene Symbol: rps29
Alias: zgc:113935
Full Name: ribosomal protein S29
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6609 bases
Position: chr20:54079341-54085949
Accession: ZDB-GENE-040622-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000060443	Ribosomal_S14	PF00253.21	9.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000060444	-	346	-	ENSDARP00000060443	56 (aa)	-	Q6Q419

Gene Model

Click here to download ENSDARG00000041232's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000041232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000041232	rps29	100	92.857	ENSACIG00000003518	rps29	75	92.857	Amphilophus_citrinellus
ENSDARG00000041232	rps29	98	96.364	ENSANAG00000024423	-	100	96.364	Aotus_nancymaae
ENSDARG00000041232	rps29	89	70.000	ENSACLG00000000915	rps29	59	70.000	Astatotilapia_calliptera
ENSDARG00000041232	rps29	100	96.429	ENSBTAG00000052337	RPS29	100	96.429	Bos_taurus
ENSDARG00000041232	rps29	100	96.429	ENSCJAG00000039096	-	100	96.429	Callithrix_jacchus
ENSDARG00000041232	rps29	100	87.500	ENSCJAG00000031814	-	100	87.500	Callithrix_jacchus
ENSDARG00000041232	rps29	100	89.286	ENSCAFG00020003021	-	100	89.286	Canis_lupus_dingo
ENSDARG00000041232	rps29	98	74.545	ENSCAFG00020021989	-	50	74.545	Canis_lupus_dingo
ENSDARG00000041232	rps29	100	80.357	ENSCAFG00020002956	-	100	80.357	Canis_lupus_dingo
ENSDARG00000041232	rps29	100	91.071	ENSCHIG00000010682	-	100	91.071	Capra_hircus
ENSDARG00000041232	rps29	100	96.429	ENSTSYG00000030415	-	100	96.429	Carlito_syrichta
ENSDARG00000041232	rps29	100	73.214	ENSTSYG00000012410	-	100	73.214	Carlito_syrichta
ENSDARG00000041232	rps29	100	96.429	ENSCPOG00000032637	-	100	96.429	Cavia_porcellus
ENSDARG00000041232	rps29	100	96.429	ENSCCAG00000019033	-	100	96.429	Cebus_capucinus
ENSDARG00000041232	rps29	100	94.643	ENSCCAG00000019847	-	100	94.643	Cebus_capucinus
ENSDARG00000041232	rps29	100	96.429	ENSCCAG00000032090	-	100	96.429	Cebus_capucinus
ENSDARG00000041232	rps29	100	94.643	ENSCCAG00000020608	-	100	94.643	Cebus_capucinus
ENSDARG00000041232	rps29	100	96.429	ENSCCAG00000001210	-	100	96.429	Cebus_capucinus
ENSDARG00000041232	rps29	100	94.643	ENSCCAG00000032225	-	100	94.643	Cebus_capucinus
ENSDARG00000041232	rps29	100	69.643	ENSCATG00000041319	-	100	69.643	Cercocebus_atys
ENSDARG00000041232	rps29	100	96.429	ENSCATG00000017816	-	100	96.429	Cercocebus_atys
ENSDARG00000041232	rps29	100	96.429	ENSCATG00000011469	-	100	96.429	Cercocebus_atys
ENSDARG00000041232	rps29	100	96.429	ENSCSAG00000015276	-	100	96.429	Chlorocebus_sabaeus
ENSDARG00000041232	rps29	91	72.549	ENSCHOG00000011358	-	93	72.549	Choloepus_hoffmanni
ENSDARG00000041232	rps29	100	87.500	ENSCPBG00000019385	-	100	87.500	Chrysemys_picta_bellii
ENSDARG00000041232	rps29	98	72.727	ENSCPBG00000015078	-	64	72.727	Chrysemys_picta_bellii
ENSDARG00000041232	rps29	100	96.429	ENSCPBG00000018320	-	100	96.429	Chrysemys_picta_bellii
ENSDARG00000041232	rps29	100	96.429	ENSCANG00000037526	-	100	96.429	Colobus_angolensis_palliatus
ENSDARG00000041232	rps29	100	94.643	ENSCANG00000010019	-	100	94.643	Colobus_angolensis_palliatus
ENSDARG00000041232	rps29	100	96.429	ENSCANG00000019407	-	100	96.429	Colobus_angolensis_palliatus
ENSDARG00000041232	rps29	100	94.643	ENSCGRG00001001537	-	92	94.643	Cricetulus_griseus_chok1gshd
ENSDARG00000041232	rps29	100	85.714	ENSCGRG00001010167	-	100	85.714	Cricetulus_griseus_chok1gshd
ENSDARG00000041232	rps29	100	78.571	ENSCGRG00001000990	-	66	78.571	Cricetulus_griseus_chok1gshd
ENSDARG00000041232	rps29	100	83.929	ENSCGRG00001005461	-	100	83.929	Cricetulus_griseus_chok1gshd
ENSDARG00000041232	rps29	100	96.429	ENSCGRG00001020113	Rps29	100	96.429	Cricetulus_griseus_chok1gshd
ENSDARG00000041232	rps29	100	83.929	ENSCGRG00000019460	-	100	83.929	Cricetulus_griseus_crigri
ENSDARG00000041232	rps29	100	94.643	ENSCGRG00000018591	-	92	94.643	Cricetulus_griseus_crigri
ENSDARG00000041232	rps29	100	85.714	ENSCGRG00000019055	-	100	85.714	Cricetulus_griseus_crigri
ENSDARG00000041232	rps29	100	78.571	ENSCGRG00000019197	-	66	78.571	Cricetulus_griseus_crigri
ENSDARG00000041232	rps29	100	69.643	ENSCGRG00000009208	-	100	69.643	Cricetulus_griseus_crigri
ENSDARG00000041232	rps29	98	96.364	ENSCSEG00000001818	rps29	60	96.364	Cynoglossus_semilaevis
ENSDARG00000041232	rps29	100	81.667	ENSDORG00000013874	-	100	81.667	Dipodomys_ordii
ENSDARG00000041232	rps29	100	87.500	ENSDORG00000026532	-	100	87.500	Dipodomys_ordii
ENSDARG00000041232	rps29	100	92.857	ENSDORG00000028731	-	100	92.857	Dipodomys_ordii
ENSDARG00000041232	rps29	100	82.143	ENSEBUG00000011966	rps29	65	82.143	Eptatretus_burgeri
ENSDARG00000041232	rps29	98	63.636	ENSEASG00005020582	-	95	63.636	Equus_asinus_asinus
ENSDARG00000041232	rps29	98	96.364	ENSEASG00005007821	-	65	96.364	Equus_asinus_asinus
ENSDARG00000041232	rps29	98	96.364	ENSECAG00000011782	RPS29	65	96.364	Equus_caballus
ENSDARG00000041232	rps29	100	76.786	ENSFCAG00000024162	-	100	76.786	Felis_catus
ENSDARG00000041232	rps29	100	96.429	ENSFALG00000001808	-	92	96.429	Ficedula_albicollis
ENSDARG00000041232	rps29	100	96.429	ENSFALG00000001738	-	92	96.429	Ficedula_albicollis
ENSDARG00000041232	rps29	100	98.214	ENSGACG00000012858	rps29	100	98.214	Gasterosteus_aculeatus
ENSDARG00000041232	rps29	98	81.818	ENSGAGG00000016743	-	92	81.818	Gopherus_agassizii
ENSDARG00000041232	rps29	84	91.489	ENSGAGG00000025088	-	57	91.489	Gopherus_agassizii
ENSDARG00000041232	rps29	100	96.429	ENSGGOG00000042996	-	100	96.429	Gorilla_gorilla
ENSDARG00000041232	rps29	100	92.857	ENSGGOG00000042896	-	100	92.857	Gorilla_gorilla
ENSDARG00000041232	rps29	100	96.429	ENSHBUG00000018115	rps29	100	96.429	Haplochromis_burtoni
ENSDARG00000041232	rps29	100	78.571	ENSJJAG00000011627	-	100	78.571	Jaculus_jaculus
ENSDARG00000041232	rps29	100	96.429	ENSLAFG00000031145	-	100	96.429	Loxodonta_africana
ENSDARG00000041232	rps29	100	96.429	ENSMFAG00000026635	-	100	96.429	Macaca_fascicularis
ENSDARG00000041232	rps29	100	96.429	ENSMMUG00000008939	-	100	96.429	Macaca_mulatta
ENSDARG00000041232	rps29	100	94.643	ENSMMUG00000040278	-	100	94.643	Macaca_mulatta
ENSDARG00000041232	rps29	100	96.429	ENSMMUG00000043502	-	100	96.429	Macaca_mulatta
ENSDARG00000041232	rps29	100	89.286	ENSMMUG00000032153	-	100	89.286	Macaca_mulatta
ENSDARG00000041232	rps29	100	83.929	ENSMMUG00000043202	-	100	83.929	Macaca_mulatta
ENSDARG00000041232	rps29	100	96.429	ENSMNEG00000027952	-	100	96.429	Macaca_nemestrina
ENSDARG00000041232	rps29	100	96.429	ENSMNEG00000037893	-	100	96.429	Macaca_nemestrina
ENSDARG00000041232	rps29	100	94.643	ENSMLEG00000026733	-	100	94.643	Mandrillus_leucophaeus
ENSDARG00000041232	rps29	100	96.429	ENSMZEG00005012261	rps29	100	96.429	Maylandia_zebra
ENSDARG00000041232	rps29	100	96.429	ENSMGAG00000013705	-	100	96.429	Meleagris_gallopavo
ENSDARG00000041232	rps29	100	85.714	ENSMAUG00000005362	-	100	85.714	Mesocricetus_auratus
ENSDARG00000041232	rps29	98	83.636	ENSMAUG00000019410	-	100	83.636	Mesocricetus_auratus
ENSDARG00000041232	rps29	63	97.143	ENSMAUG00000000899	-	100	97.143	Mesocricetus_auratus
ENSDARG00000041232	rps29	100	96.429	ENSMICG00000045654	-	100	96.429	Microcebus_murinus
ENSDARG00000041232	rps29	100	92.857	ENSMICG00000041582	-	100	92.857	Microcebus_murinus
ENSDARG00000041232	rps29	100	96.429	ENSMOCG00000017681	Rps29	100	96.429	Microtus_ochrogaster
ENSDARG00000041232	rps29	96	96.296	ENSMMOG00000005119	rps29	51	96.296	Mola_mola
ENSDARG00000041232	rps29	100	85.714	ENSMODG00000025305	-	100	85.714	Monodelphis_domestica
ENSDARG00000041232	rps29	100	96.429	MGP_CAROLIEiJ_G0017795	-	100	96.429	Mus_caroli
ENSDARG00000041232	rps29	100	96.429	ENSMUSG00000034892	Rps29	100	96.429	Mus_musculus
ENSDARG00000041232	rps29	100	96.429	MGP_PahariEiJ_G0029551	-	100	96.429	Mus_pahari
ENSDARG00000041232	rps29	100	96.429	MGP_SPRETEiJ_G0018641	Rps29	100	96.429	Mus_spretus
ENSDARG00000041232	rps29	100	87.500	MGP_SPRETEiJ_G0019597	-	92	87.500	Mus_spretus
ENSDARG00000041232	rps29	100	96.429	ENSMLUG00000025262	-	100	96.429	Myotis_lucifugus
ENSDARG00000041232	rps29	100	87.500	ENSMLUG00000029871	-	100	87.500	Myotis_lucifugus
ENSDARG00000041232	rps29	98	96.364	ENSMLUG00000025007	-	100	96.364	Myotis_lucifugus
ENSDARG00000041232	rps29	100	76.786	ENSNGAG00000011632	-	100	76.786	Nannospalax_galili
ENSDARG00000041232	rps29	100	96.429	ENSNGAG00000013159	Rps29	100	96.429	Nannospalax_galili
ENSDARG00000041232	rps29	100	92.857	ENSNBRG00000021854	rps29	70	92.857	Neolamprologus_brichardi
ENSDARG00000041232	rps29	100	75.000	ENSNLEG00000031810	-	64	75.000	Nomascus_leucogenys
ENSDARG00000041232	rps29	100	94.643	ENSNLEG00000018259	-	100	94.643	Nomascus_leucogenys
ENSDARG00000041232	rps29	100	92.857	ENSODEG00000019960	-	100	92.857	Octodon_degus
ENSDARG00000041232	rps29	100	96.429	ENSODEG00000018519	-	100	96.429	Octodon_degus
ENSDARG00000041232	rps29	93	90.385	ENSODEG00000019249	-	100	90.385	Octodon_degus
ENSDARG00000041232	rps29	100	96.429	ENSODEG00000019220	-	100	96.429	Octodon_degus
ENSDARG00000041232	rps29	100	89.286	ENSODEG00000019457	-	100	89.286	Octodon_degus
ENSDARG00000041232	rps29	100	96.429	ENSONIG00000000829	rps29	100	96.429	Oreochromis_niloticus
ENSDARG00000041232	rps29	100	96.429	ENSOCUG00000027423	RPS29	100	96.429	Oryctolagus_cuniculus
ENSDARG00000041232	rps29	98	96.364	ENSOMEG00000010831	rps29	69	96.364	Oryzias_melastigma
ENSDARG00000041232	rps29	100	85.714	ENSOGAG00000032475	-	100	85.714	Otolemur_garnettii
ENSDARG00000041232	rps29	100	85.714	ENSOGAG00000033843	-	100	85.714	Otolemur_garnettii
ENSDARG00000041232	rps29	100	87.500	ENSOARG00000007891	-	92	87.500	Ovis_aries
ENSDARG00000041232	rps29	100	75.000	ENSPPRG00000017352	-	100	75.000	Panthera_pardus
ENSDARG00000041232	rps29	100	96.429	ENSPPRG00000022391	-	100	96.429	Panthera_pardus
ENSDARG00000041232	rps29	100	94.643	ENSPPRG00000011061	-	100	94.643	Panthera_pardus
ENSDARG00000041232	rps29	100	96.429	ENSPTIG00000006207	-	100	96.429	Panthera_tigris_altaica
ENSDARG00000041232	rps29	100	96.429	ENSPANG00000023730	-	100	96.429	Papio_anubis
ENSDARG00000041232	rps29	100	85.714	ENSPANG00000029212	-	100	85.714	Papio_anubis
ENSDARG00000041232	rps29	100	96.429	ENSPANG00000033247	-	100	96.429	Papio_anubis
ENSDARG00000041232	rps29	100	96.429	ENSPPYG00000005785	RPS29	100	96.429	Pongo_abelii
ENSDARG00000041232	rps29	100	82.143	ENSPCOG00000015576	-	100	82.143	Propithecus_coquereli
ENSDARG00000041232	rps29	100	96.429	ENSPCOG00000024671	-	100	96.429	Propithecus_coquereli
ENSDARG00000041232	rps29	100	96.429	ENSRNOG00000028939	Rps29	100	96.429	Rattus_norvegicus
ENSDARG00000041232	rps29	100	96.429	ENSRNOG00000029443	LOC108352650	100	96.429	Rattus_norvegicus
ENSDARG00000041232	rps29	100	96.429	ENSRNOG00000004196	LOC108350501	100	96.429	Rattus_norvegicus
ENSDARG00000041232	rps29	100	96.429	ENSRNOG00000032542	LOC108351482	100	96.429	Rattus_norvegicus
ENSDARG00000041232	rps29	100	94.643	ENSRBIG00000011261	-	100	94.643	Rhinopithecus_bieti
ENSDARG00000041232	rps29	100	94.643	ENSRBIG00000020563	-	100	94.643	Rhinopithecus_bieti
ENSDARG00000041232	rps29	100	96.429	ENSRBIG00000016462	-	100	96.429	Rhinopithecus_bieti
ENSDARG00000041232	rps29	100	94.643	ENSRBIG00000007567	-	100	94.643	Rhinopithecus_bieti
ENSDARG00000041232	rps29	100	96.429	ENSRBIG00000017110	-	100	96.429	Rhinopithecus_bieti
ENSDARG00000041232	rps29	100	96.429	ENSRROG00000037175	-	100	96.429	Rhinopithecus_roxellana
ENSDARG00000041232	rps29	100	96.429	ENSRROG00000020854	-	100	96.429	Rhinopithecus_roxellana
ENSDARG00000041232	rps29	100	92.857	ENSRROG00000017887	-	100	92.857	Rhinopithecus_roxellana
ENSDARG00000041232	rps29	100	96.429	ENSRROG00000009364	-	100	96.429	Rhinopithecus_roxellana
ENSDARG00000041232	rps29	100	96.429	ENSRROG00000011987	-	100	96.429	Rhinopithecus_roxellana
ENSDARG00000041232	rps29	100	96.429	ENSRROG00000009633	-	100	96.429	Rhinopithecus_roxellana
ENSDARG00000041232	rps29	100	94.643	ENSRROG00000015879	-	100	94.643	Rhinopithecus_roxellana
ENSDARG00000041232	rps29	100	92.857	ENSSBOG00000009349	-	100	92.857	Saimiri_boliviensis_boliviensis
ENSDARG00000041232	rps29	100	94.643	ENSSBOG00000019207	-	100	94.643	Saimiri_boliviensis_boliviensis
ENSDARG00000041232	rps29	100	94.643	ENSSBOG00000012724	-	100	94.643	Saimiri_boliviensis_boliviensis
ENSDARG00000041232	rps29	63	97.143	ENSSBOG00000029046	-	66	97.143	Saimiri_boliviensis_boliviensis
ENSDARG00000041232	rps29	98	96.364	ENSSFOG00015000394	-	73	96.364	Scleropages_formosus
ENSDARG00000041232	rps29	100	94.643	ENSSDUG00000009578	rps29	63	94.643	Seriola_dumerili
ENSDARG00000041232	rps29	100	96.429	ENSSSCG00000038507	-	100	96.429	Sus_scrofa
ENSDARG00000041232	rps29	100	80.357	ENSSSCG00000037150	-	100	80.357	Sus_scrofa
ENSDARG00000041232	rps29	100	75.000	ENSSSCG00000001855	-	100	75.000	Sus_scrofa
ENSDARG00000041232	rps29	100	83.929	ENSSSCG00000035779	-	100	83.929	Sus_scrofa
ENSDARG00000041232	rps29	98	94.545	ENSUAMG00000012422	-	54	94.545	Ursus_americanus
ENSDARG00000041232	rps29	71	85.000	ENSUAMG00000005201	-	75	85.000	Ursus_americanus
ENSDARG00000041232	rps29	100	76.786	ENSUAMG00000003050	-	100	76.786	Ursus_americanus
ENSDARG00000041232	rps29	100	89.286	ENSUAMG00000002506	-	100	89.286	Ursus_americanus
ENSDARG00000041232	rps29	100	96.429	ENSUAMG00000022821	-	100	96.429	Ursus_americanus
ENSDARG00000041232	rps29	100	91.071	ENSUAMG00000016993	-	100	91.071	Ursus_americanus
ENSDARG00000041232	rps29	98	94.545	ENSUMAG00000007648	-	54	94.545	Ursus_maritimus
ENSDARG00000041232	rps29	100	91.071	ENSUMAG00000019137	-	100	91.071	Ursus_maritimus
ENSDARG00000041232	rps29	100	76.786	ENSUMAG00000008130	-	100	76.786	Ursus_maritimus
ENSDARG00000041232	rps29	100	87.500	ENSUMAG00000012903	-	100	87.500	Ursus_maritimus
ENSDARG00000041232	rps29	98	74.545	ENSVVUG00000029871	-	53	74.545	Vulpes_vulpes
ENSDARG00000041232	rps29	100	83.929	ENSVVUG00000016811	-	100	83.929	Vulpes_vulpes
ENSDARG00000041232	rps29	100	92.857	ENSVVUG00000000785	-	100	92.857	Vulpes_vulpes
ENSDARG00000041232	rps29	100	96.429	ENSXETG00000027734	rps29	100	96.429	Xenopus_tropicalis
ENSDARG00000041232	rps29	100	94.643	ENSXCOG00000007248	rps29	72	94.643	Xiphophorus_couchianus
ENSDARG00000041232	rps29	80	95.556	ENSXMAG00000019760	-	80	95.556	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001525	angiogenesis	19332767.	IMP	Process
GO:0001570	vasculogenesis	19332767.	IMP	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0008270	zinc ion binding	21873635.	IBA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0022627	cytosolic small ribosomal subunit	21873635.	IBA	Component
GO:0030218	erythrocyte differentiation	24829207.	IMP	Process
GO:0043009	chordate embryonic development	17183665.	IMP	Process
GO:0048821	erythrocyte development	22120640.	IMP	Process
GO:0051726	regulation of cell cycle	15138505.	IMP	Process
GO:0060218	hematopoietic stem cell differentiation	19332767.	IMP	Process
GO:0072332	intrinsic apoptotic signaling pathway by p53 class mediator	22120640.	IMP	Process