EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000041609 (Gene tree)
Gene ID
58134
Gene Symbol
adarb1a
Alias
ADAR2|RED1|adarb1
Full Name
adenosine deaminase%2C RNA-specific%2C B1a
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
52258 bases
Position
chr22:12641580-12693837
Accession
ZDB-GENE-000627-2
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000105962dsrmPF00035.269.1e-2912
ENSDARP00000105962dsrmPF00035.269.1e-2922
ENSDARP00000044573dsrmPF00035.261e-2812
ENSDARP00000044573dsrmPF00035.261e-2822
ENSDARP00000105962A_deaminPF02137.184.4e-11411
ENSDARP00000044573A_deaminPF02137.184.8e-11411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000129768-5944-ENSDARP00000105962689 (aa)-A5WUX0
ENSDART00000044574-5959XM_021469375ENSDARP00000044573720 (aa)XP_021325050A5WUX1
Gene Model
Click here to download ENSDARG00000041609's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000041609's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000041609adarb1a9983.673ENSDARG00000003544adarb1b9983.143
ENSDARG00000041609adarb1a9950.992ENSDARG00000071823adarb29451.469
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000041609adarb1a9972.532ENSG00000197381ADARB110071.950Homo_sapiens
ENSDARG00000041609adarb1a9982.029ENSAPOG00000021651adarb1b9980.993Acanthochromis_polyacanthus
ENSDARG00000041609adarb1a9976.957ENSAPOG00000021275-9975.959Acanthochromis_polyacanthus
ENSDARG00000041609adarb1a9972.294ENSAMEG00000001885ADARB19971.151Ailuropoda_melanoleuca
ENSDARG00000041609adarb1a9979.716ENSACIG00000004927adarb1b9981.197Amphilophus_citrinellus
ENSDARG00000041609adarb1a9878.466ENSACIG00000024297-9977.467Amphilophus_citrinellus
ENSDARG00000041609adarb1a9983.043ENSAOCG00000001169-9983.043Amphiprion_ocellaris
ENSDARG00000041609adarb1a9982.029ENSAOCG00000004046adarb1b9980.993Amphiprion_ocellaris
ENSDARG00000041609adarb1a9882.743ENSAPEG00000011629-9982.743Amphiprion_percula
ENSDARG00000041609adarb1a9982.029ENSAPEG00000007937adarb1b9980.993Amphiprion_percula
ENSDARG00000041609adarb1a9981.439ENSATEG00000011777adarb1b9980.622Anabas_testudineus
ENSDARG00000041609adarb1a9978.292ENSATEG00000013653-9976.662Anabas_testudineus
ENSDARG00000041609adarb1a9975.867ENSAPLG00000015600ADARB19974.894Anas_platyrhynchos
ENSDARG00000041609adarb1a9975.683ENSACAG00000009710ADARB19974.612Anolis_carolinensis
ENSDARG00000041609adarb1a9972.961ENSANAG00000023685ADARB110072.370Aotus_nancymaae
ENSDARG00000041609adarb1a9975.652ENSACLG00000009531-9974.564Astatotilapia_calliptera
ENSDARG00000041609adarb1a9981.385ENSACLG00000006817adarb1b9980.851Astatotilapia_calliptera
ENSDARG00000041609adarb1a9983.673ENSAMXG00000018363adarb1b9983.143Astyanax_mexicanus
ENSDARG00000041609adarb1a9984.012ENSAMXG00000013675adarb1a9983.843Astyanax_mexicanus
ENSDARG00000041609adarb1a9971.102ENSBTAG00000017486ADARB19771.550Bos_taurus
ENSDARG00000041609adarb1a9971.960ENSCJAG00000018646ADARB110071.529Callithrix_jacchus
ENSDARG00000041609adarb1a9971.531ENSCAFG00000011077ADARB110071.248Canis_familiaris
ENSDARG00000041609adarb1a9971.327ENSCAFG00020019446ADARB110071.049Canis_lupus_dingo
ENSDARG00000041609adarb1a9970.815ENSCHIG00000018259ADARB110070.687Capra_hircus
ENSDARG00000041609adarb1a9971.960ENSTSYG00000014318ADARB110071.408Carlito_syrichta
ENSDARG00000041609adarb1a8669.444ENSCAPG00000014999ADARB19969.643Cavia_aperea
ENSDARG00000041609adarb1a8372.117ENSCPOG00000022969ADARB19771.597Cavia_porcellus
ENSDARG00000041609adarb1a9972.532ENSCCAG00000029934ADARB110071.950Cebus_capucinus
ENSDARG00000041609adarb1a9972.246ENSCATG00000029876ADARB110071.669Cercocebus_atys
ENSDARG00000041609adarb1a9971.777ENSCLAG00000010595ADARB110071.248Chinchilla_lanigera
ENSDARG00000041609adarb1a9972.246ENSCSAG00000007489ADARB110071.669Chlorocebus_sabaeus
ENSDARG00000041609adarb1a9975.977ENSCPBG00000004191ADARB19876.567Chrysemys_picta_bellii
ENSDARG00000041609adarb1a9972.532ENSCANG00000005413ADARB110071.950Colobus_angolensis_palliatus
ENSDARG00000041609adarb1a9972.040ENSCGRG00001023922Adarb110071.569Cricetulus_griseus_chok1gshd
ENSDARG00000041609adarb1a9972.040ENSCGRG00000005984Adarb110071.569Cricetulus_griseus_crigri
ENSDARG00000041609adarb1a9981.977ENSCSEG00000019137adarb1b10080.028Cynoglossus_semilaevis
ENSDARG00000041609adarb1a9562.974ENSCSEG00000005961-9762.348Cynoglossus_semilaevis
ENSDARG00000041609adarb1a9981.792ENSCVAG00000006161adarb1b9980.567Cyprinodon_variegatus
ENSDARG00000041609adarb1a8370.884ENSDNOG00000006954ADARB18870.558Dasypus_novemcinctus
ENSDARG00000041609adarb1a9964.861ENSDORG00000000619Adarb110064.441Dipodomys_ordii
ENSDARG00000041609adarb1a9967.703ENSETEG00000007374ADARB110067.507Echinops_telfairi
ENSDARG00000041609adarb1a9738.071ENSEBUG00000007277-8642.737Eptatretus_burgeri
ENSDARG00000041609adarb1a9952.901ENSEBUG00000004654-8974.419Eptatretus_burgeri
ENSDARG00000041609adarb1a9972.246ENSEASG00005007085ADARB110071.669Equus_asinus_asinus
ENSDARG00000041609adarb1a9972.389ENSECAG00000019917ADARB110071.809Equus_caballus
ENSDARG00000041609adarb1a9981.766ENSELUG00000012944adarb1b9981.000Esox_lucius
ENSDARG00000041609adarb1a9980.599ENSELUG00000016573adarb1a9879.828Esox_lucius
ENSDARG00000041609adarb1a9971.960ENSFCAG00000009665ADARB110071.950Felis_catus
ENSDARG00000041609adarb1a9977.928ENSFALG00000013340ADARB19977.477Ficedula_albicollis
ENSDARG00000041609adarb1a9971.388ENSFDAG00000007146ADARB110070.968Fukomys_damarensis
ENSDARG00000041609adarb1a9878.971ENSFHEG00000005765adarb1b9583.010Fundulus_heteroclitus
ENSDARG00000041609adarb1a9974.818ENSFHEG00000015959-9973.371Fundulus_heteroclitus
ENSDARG00000041609adarb1a5873.902ENSGMOG00000002964-9973.902Gadus_morhua
ENSDARG00000041609adarb1a9483.746ENSGMOG00000005924adarb1b9576.528Gadus_morhua
ENSDARG00000041609adarb1a7878.664ENSGALG00000007527ADARB110074.099Gallus_gallus
ENSDARG00000041609adarb1a9982.533ENSGAFG00000018552adarb1b9980.426Gambusia_affinis
ENSDARG00000041609adarb1a9975.434ENSGAFG00000002675-9672.917Gambusia_affinis
ENSDARG00000041609adarb1a9980.870ENSGACG00000002216adarb1b9479.635Gasterosteus_aculeatus
ENSDARG00000041609adarb1a9981.395ENSGACG00000015240-9880.347Gasterosteus_aculeatus
ENSDARG00000041609adarb1a9776.567ENSGAGG00000013378ADARB19876.269Gopherus_agassizii
ENSDARG00000041609adarb1a9972.675ENSGGOG00000013244ADARB110072.090Gorilla_gorilla
ENSDARG00000041609adarb1a9981.385ENSHBUG00000004710adarb1b9980.851Haplochromis_burtoni
ENSDARG00000041609adarb1a7474.074ENSHBUG00000023046-8770.943Haplochromis_burtoni
ENSDARG00000041609adarb1a9971.960ENSHGLG00000005906ADARB110071.529Heterocephalus_glaber_female
ENSDARG00000041609adarb1a9971.960ENSHGLG00100006988ADARB110071.529Heterocephalus_glaber_male
ENSDARG00000041609adarb1a9982.507ENSHCOG00000009597adarb1b9980.966Hippocampus_comes
ENSDARG00000041609adarb1a9983.552ENSIPUG00000008384adarb1b9983.024Ictalurus_punctatus
ENSDARG00000041609adarb1a9980.233ENSIPUG00000008816adarb19980.087Ictalurus_punctatus
ENSDARG00000041609adarb1a9971.960ENSSTOG00000015792ADARB110071.709Ictidomys_tridecemlineatus
ENSDARG00000041609adarb1a9968.000ENSJJAG00000016847Adarb110068.052Jaculus_jaculus
ENSDARG00000041609adarb1a9679.228ENSKMAG00000010426-9977.201Kryptolebias_marmoratus
ENSDARG00000041609adarb1a9981.713ENSKMAG00000018557adarb1b9980.540Kryptolebias_marmoratus
ENSDARG00000041609adarb1a9979.513ENSLBEG00000017967-9979.799Labrus_bergylta
ENSDARG00000041609adarb1a9981.395ENSLBEG00000026387adarb1b9980.370Labrus_bergylta
ENSDARG00000041609adarb1a9976.599ENSLACG00000008270ADARB19976.453Latimeria_chalumnae
ENSDARG00000041609adarb1a9982.558ENSLOCG00000009051adarb1b10081.909Lepisosteus_oculatus
ENSDARG00000041609adarb1a9971.368ENSLAFG00000007480ADARB110070.816Loxodonta_africana
ENSDARG00000041609adarb1a9972.246ENSMFAG00000011312ADARB110071.669Macaca_fascicularis
ENSDARG00000041609adarb1a9972.246ENSMMUG00000010695ADARB110071.669Macaca_mulatta
ENSDARG00000041609adarb1a9972.246ENSMNEG00000031543ADARB110071.669Macaca_nemestrina
ENSDARG00000041609adarb1a9963.805ENSMLEG00000033846ADARB110060.159Mandrillus_leucophaeus
ENSDARG00000041609adarb1a9981.304ENSMAMG00000013170adarb1b9980.284Mastacembelus_armatus
ENSDARG00000041609adarb1a9677.693ENSMAMG00000000571-9777.356Mastacembelus_armatus
ENSDARG00000041609adarb1a9981.385ENSMZEG00005017003adarb1b9980.851Maylandia_zebra
ENSDARG00000041609adarb1a9975.797ENSMZEG00005021060-9474.709Maylandia_zebra
ENSDARG00000041609adarb1a9679.885ENSMGAG00000000971ADARB19978.670Meleagris_gallopavo
ENSDARG00000041609adarb1a9971.167ENSMAUG00000009334Adarb110070.718Mesocricetus_auratus
ENSDARG00000041609adarb1a9970.113ENSMICG00000008433ADARB110070.056Microcebus_murinus
ENSDARG00000041609adarb1a9972.040ENSMOCG00000018324Adarb110071.569Microtus_ochrogaster
ENSDARG00000041609adarb1a9980.612ENSMMOG00000005423adarb1b9980.556Mola_mola
ENSDARG00000041609adarb1a9979.420ENSMMOG00000006394-9878.129Mola_mola
ENSDARG00000041609adarb1a9980.952ENSMALG00000022629adarb1b9980.142Monopterus_albus
ENSDARG00000041609adarb1a9971.755MGP_CAROLIEiJ_G0015481Adarb110071.289Mus_caroli
ENSDARG00000041609adarb1a9971.755ENSMUSG00000020262Adarb110071.289Mus_musculus
ENSDARG00000041609adarb1a9971.897MGP_PahariEiJ_G0030894Adarb110071.429Mus_pahari
ENSDARG00000041609adarb1a9971.755MGP_SPRETEiJ_G0016294Adarb110071.429Mus_spretus
ENSDARG00000041609adarb1a9972.006ENSMPUG00000010296ADARB110071.248Mustela_putorius_furo
ENSDARG00000041609adarb1a9773.134ENSMLUG00000011328ADARB110069.468Myotis_lucifugus
ENSDARG00000041609adarb1a9971.612ENSNGAG00000021602Adarb110071.248Nannospalax_galili
ENSDARG00000041609adarb1a9974.674ENSNBRG00000013437-9973.768Neolamprologus_brichardi
ENSDARG00000041609adarb1a9981.385ENSNBRG00000015066adarb1b9980.851Neolamprologus_brichardi
ENSDARG00000041609adarb1a9972.389ENSNLEG00000002514ADARB110071.809Nomascus_leucogenys
ENSDARG00000041609adarb1a9970.685ENSMEUG00000009400ADARB19970.274Notamacropus_eugenii
ENSDARG00000041609adarb1a8371.711ENSOPRG00000000350-7072.517Ochotona_princeps
ENSDARG00000041609adarb1a9970.195ENSODEG00000014508ADARB19970.474Octodon_degus
ENSDARG00000041609adarb1a9980.830ENSONIG00000004464adarb1b9480.645Oreochromis_niloticus
ENSDARG00000041609adarb1a9974.456ENSONIG00000007354-9871.950Oreochromis_niloticus
ENSDARG00000041609adarb1a9975.977ENSOANG00000012491ADARB19474.474Ornithorhynchus_anatinus
ENSDARG00000041609adarb1a9971.102ENSOCUG00000004683ADARB19570.028Oryctolagus_cuniculus
ENSDARG00000041609adarb1a9981.884ENSORLG00000018106adarb1b9980.851Oryzias_latipes
ENSDARG00000041609adarb1a9557.230ENSORLG00000020682-9556.860Oryzias_latipes
ENSDARG00000041609adarb1a9556.707ENSORLG00020013949-9556.336Oryzias_latipes_hni
ENSDARG00000041609adarb1a9981.739ENSORLG00020012709adarb1b9980.709Oryzias_latipes_hni
ENSDARG00000041609adarb1a9981.884ENSORLG00015008706adarb1b9480.478Oryzias_latipes_hsok
ENSDARG00000041609adarb1a9557.839ENSORLG00015016287-9257.317Oryzias_latipes_hsok
ENSDARG00000041609adarb1a9982.029ENSOMEG00000010493adarb1b9980.993Oryzias_melastigma
ENSDARG00000041609adarb1a9960.958ENSOMEG00000010969-9961.383Oryzias_melastigma
ENSDARG00000041609adarb1a9970.156ENSOGAG00000017167ADARB110069.626Otolemur_garnettii
ENSDARG00000041609adarb1a9970.809ENSOARG00000012452ADARB18669.608Ovis_aries
ENSDARG00000041609adarb1a9972.532ENSPPAG00000027139ADARB110071.950Pan_paniscus
ENSDARG00000041609adarb1a9971.817ENSPPRG00000012281ADARB110071.809Panthera_pardus
ENSDARG00000041609adarb1a9171.541ENSPTIG00000007673ADARB19965.746Panthera_tigris_altaica
ENSDARG00000041609adarb1a9972.532ENSPTRG00000013997ADARB110071.950Pan_troglodytes
ENSDARG00000041609adarb1a9972.246ENSPANG00000020871ADARB19971.886Papio_anubis
ENSDARG00000041609adarb1a9984.548ENSPKIG00000010029adarb1b9983.429Paramormyrops_kingsleyae
ENSDARG00000041609adarb1a9978.818ENSPKIG00000014295adarb1b9978.066Paramormyrops_kingsleyae
ENSDARG00000041609adarb1a9975.832ENSPSIG00000006201ADARB19974.964Pelodiscus_sinensis
ENSDARG00000041609adarb1a9981.727ENSPMGG00000011320adarb1a9381.385Periophthalmus_magnuspinnatus
ENSDARG00000041609adarb1a9970.745ENSPEMG00000022360Adarb110070.304Peromyscus_maniculatus_bairdii
ENSDARG00000041609adarb1a5563.797ENSPMAG00000006731-9764.583Petromyzon_marinus
ENSDARG00000041609adarb1a9965.036ENSPMAG00000007453-9964.589Petromyzon_marinus
ENSDARG00000041609adarb1a9975.072ENSPCIG00000024187ADARB19973.722Phascolarctos_cinereus
ENSDARG00000041609adarb1a9981.241ENSPFOG00000002576adarb1b9980.426Poecilia_formosa
ENSDARG00000041609adarb1a9974.892ENSPFOG00000002564-9973.542Poecilia_formosa
ENSDARG00000041609adarb1a9980.580ENSPLAG00000003525adarb1b9979.830Poecilia_latipinna
ENSDARG00000041609adarb1a9981.241ENSPMEG00000014365adarb1b9980.426Poecilia_mexicana
ENSDARG00000041609adarb1a9975.325ENSPMEG00000009668-9374.566Poecilia_mexicana
ENSDARG00000041609adarb1a9975.145ENSPREG00000018254-9772.778Poecilia_reticulata
ENSDARG00000041609adarb1a9981.594ENSPREG00000016600adarb1b9980.426Poecilia_reticulata
ENSDARG00000041609adarb1a9972.532ENSPPYG00000011514ADARB110071.950Pongo_abelii
ENSDARG00000041609adarb1a5676.687ENSPCAG00000012027-5576.687Procavia_capensis
ENSDARG00000041609adarb1a9972.246ENSPCOG00000020406ADARB110071.669Propithecus_coquereli
ENSDARG00000041609adarb1a8771.993ENSPVAG00000012197ADARB19968.606Pteropus_vampyrus
ENSDARG00000041609adarb1a9981.385ENSPNYG00000000542adarb1b9980.851Pundamilia_nyererei
ENSDARG00000041609adarb1a9975.977ENSPNYG00000016509-9974.820Pundamilia_nyererei
ENSDARG00000041609adarb1a9983.965ENSPNAG00000013623adarb1b9983.714Pygocentrus_nattereri
ENSDARG00000041609adarb1a7284.879ENSPNAG00000022697adarb1a9979.403Pygocentrus_nattereri
ENSDARG00000041609adarb1a9971.755ENSRNOG00000001227Adarb19871.843Rattus_norvegicus
ENSDARG00000041609adarb1a9972.532ENSRBIG00000033033ADARB19771.567Rhinopithecus_bieti
ENSDARG00000041609adarb1a9972.532ENSRROG00000042856ADARB110074.204Rhinopithecus_roxellana
ENSDARG00000041609adarb1a8372.978ENSSBOG00000021021ADARB19972.269Saimiri_boliviensis_boliviensis
ENSDARG00000041609adarb1a5373.973ENSSHAG00000006483-9973.973Sarcophilus_harrisii
ENSDARG00000041609adarb1a9977.616ENSSFOG00015016632adarb1b9976.590Scleropages_formosus
ENSDARG00000041609adarb1a9981.951ENSSFOG00015008633adarb1b9981.951Scleropages_formosus
ENSDARG00000041609adarb1a9780.089ENSSMAG00000009423-9879.056Scophthalmus_maximus
ENSDARG00000041609adarb1a9976.308ENSSMAG00000004206adarb1b9974.646Scophthalmus_maximus
ENSDARG00000041609adarb1a9982.754ENSSDUG00000018690-9379.944Seriola_dumerili
ENSDARG00000041609adarb1a9982.533ENSSDUG00000010164adarb1b9980.709Seriola_dumerili
ENSDARG00000041609adarb1a9881.029ENSSLDG00000013681-9981.185Seriola_lalandi_dorsalis
ENSDARG00000041609adarb1a9982.533ENSSLDG00000021316adarb1b9980.709Seriola_lalandi_dorsalis
ENSDARG00000041609adarb1a9177.778ENSSARG00000004655ADARB18577.778Sorex_araneus
ENSDARG00000041609adarb1a9975.180ENSSPUG00000014163ADARB19973.938Sphenodon_punctatus
ENSDARG00000041609adarb1a9981.884ENSSPAG00000005613adarb1b9980.851Stegastes_partitus
ENSDARG00000041609adarb1a9982.899ENSSPAG00000003299-9882.899Stegastes_partitus
ENSDARG00000041609adarb1a9969.744ENSSSCG00000012089ADARB110069.777Sus_scrofa
ENSDARG00000041609adarb1a9976.556ENSTGUG00000011159ADARB19975.461Taeniopygia_guttata
ENSDARG00000041609adarb1a9982.174ENSTRUG00000006297-9981.241Takifugu_rubripes
ENSDARG00000041609adarb1a9981.951ENSTRUG00000006823adarb1b9980.000Takifugu_rubripes
ENSDARG00000041609adarb1a9980.231ENSTNIG00000008894adarb1b9478.933Tetraodon_nigroviridis
ENSDARG00000041609adarb1a9881.912ENSTNIG00000014498-9979.627Tetraodon_nigroviridis
ENSDARG00000041609adarb1a9970.014ENSTBEG00000014798ADARB110069.339Tupaia_belangeri
ENSDARG00000041609adarb1a9969.844ENSTTRG00000002681ADARB110069.456Tursiops_truncatus
ENSDARG00000041609adarb1a9072.596ENSUAMG00000005024ADARB19871.739Ursus_americanus
ENSDARG00000041609adarb1a9972.006ENSUMAG00000025411ADARB110070.042Ursus_maritimus
ENSDARG00000041609adarb1a9971.388ENSVVUG00000023911ADARB110071.108Vulpes_vulpes
ENSDARG00000041609adarb1a9975.652ENSXETG00000018692adarb19973.611Xenopus_tropicalis
ENSDARG00000041609adarb1a9981.241ENSXCOG00000014535adarb1b9980.426Xiphophorus_couchianus
ENSDARG00000041609adarb1a9975.216ENSXCOG00000020590-9774.603Xiphophorus_couchianus
ENSDARG00000041609adarb1a9981.241ENSXMAG00000002053adarb1b9980.426Xiphophorus_maculatus
ENSDARG00000041609adarb1a9975.216ENSXMAG00000018829-9772.992Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding-IEAFunction
GO:0003725double-stranded RNA binding21873635.IBAFunction
GO:0003726double-stranded RNA adenosine deaminase activity21873635.IBAFunction
GO:0004000adenosine deaminase activity-IEAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0006382adenosine to inosine editing21873635.IBAProcess
GO:0006396RNA processing21873635.IBAProcess
GO:0006396RNA processing-IEAProcess
GO:0007399nervous system development24818983.IMPProcess
GO:0008251tRNA-specific adenosine deaminase activity21873635.IBAFunction
GO:0014032neural crest cell development24818983.IMPProcess
GO:0048701embryonic cranial skeleton morphogenesis24818983.IMPProcess
GO:0048899anterior lateral line development24818983.IMPProcess
GO:0048916posterior lateral line development24818983.IMPProcess

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