EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000041878 (Gene tree)
Gene ID: 406798
Gene Symbol: rab11ba
Alias: rab11b|wu:fb07g11|zgc:55760
Full Name: RAB11B%2C member RAS oncogene family%2C a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6939 bases
Position: chr22:17499905-17506843
Accession: ZDB-GENE-040426-2860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000061365	MMR_HSR1	PF01926.23	3e-07	1	1
ENSDARP00000114922	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000133793	-	788	-	ENSDARP00000114922	205 (aa)	-	Q1LVZ1
ENSDART00000061366	-	1804	-	ENSDARP00000061365	218 (aa)	-	Q1LVZ0
ENSDART00000148739	-	726	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000041878's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000041878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000041878	rab11ba	99	40.594	ENSDARG00000007257	rab5ab	89	41.176
ENSDARG00000041878	rab11ba	76	36.774	ENSDARG00000103714	rab6a	75	37.580
ENSDARG00000041878	rab11ba	99	45.050	ENSDARG00000029663	rab1ab	99	46.890
ENSDARG00000041878	rab11ba	99	47.030	ENSDARG00000056479	rab1bb	99	48.804
ENSDARG00000041878	rab11ba	84	37.209	ENSDARG00000114797	rab3b	83	38.122
ENSDARG00000041878	rab11ba	99	35.266	ENSDARG00000045027	rab9a	97	36.190
ENSDARG00000041878	rab11ba	56	31.933	ENSDARG00000045074	arl4d	59	32.231
ENSDARG00000041878	rab11ba	78	42.767	ENSDARG00000015807	rab22a	82	43.478
ENSDARG00000041878	rab11ba	76	33.544	ENSDARG00000075285	si:ch73-116o1.2	79	35.294
ENSDARG00000041878	rab11ba	80	47.273	ENSDARG00000019312	rab39ba	79	47.337
ENSDARG00000041878	rab11ba	83	72.928	ENSDARG00000058800	rab25a	86	72.928
ENSDARG00000041878	rab11ba	79	45.062	ENSDARG00000055291	rab18a	80	45.122
ENSDARG00000041878	rab11ba	80	54.268	ENSDARG00000020261	rab2a	81	54.971
ENSDARG00000041878	rab11ba	94	31.841	ENSDARG00000034522	rab6ba	92	32.512
ENSDARG00000041878	rab11ba	73	35.333	ENSDARG00000005651	hrasb	98	35.664
ENSDARG00000041878	rab11ba	66	30.000	ENSDARG00000033182	arl4ab	67	30.000
ENSDARG00000041878	rab11ba	76	39.375	ENSDARG00000020497	rab7a	78	40.491
ENSDARG00000041878	rab11ba	100	88.073	ENSDARG00000041450	rab11a	100	88.073
ENSDARG00000041878	rab11ba	98	38.424	ENSDARG00000034215	rab42a	99	38.208
ENSDARG00000041878	rab11ba	78	45.000	ENSDARG00000089428	rab12	86	40.094
ENSDARG00000041878	rab11ba	74	33.548	ENSDARG00000010844	kras	87	34.731
ENSDARG00000041878	rab11ba	85	36.313	ENSDARG00000087243	zgc:100918	88	37.363
ENSDARG00000041878	rab11ba	70	38.462	ENSDARG00000004151	rab23	68	37.654
ENSDARG00000041878	rab11ba	99	81.106	ENSDARG00000014340	rab11al	99	81.106
ENSDARG00000041878	rab11ba	76	54.217	ENSDARG00000058044	rab1ba	85	53.012
ENSDARG00000041878	rab11ba	80	51.724	ENSDARG00000074246	rab14	81	51.724
ENSDARG00000041878	rab11ba	68	30.070	ENSDARG00000006915	arl8ba	70	30.070
ENSDARG00000041878	rab11ba	82	40.588	ENSDARG00000003257	zgc:101559	78	40.884
ENSDARG00000041878	rab11ba	56	30.252	ENSDARG00000057606	arl4ca	60	30.252
ENSDARG00000041878	rab11ba	76	34.810	ENSDARG00000063321	rabl2	70	35.220
ENSDARG00000041878	rab11ba	79	34.356	ENSDARG00000100379	si:dkey-34d22.2	90	35.329
ENSDARG00000041878	rab11ba	78	40.244	ENSDARG00000103391	rab9b	82	41.317
ENSDARG00000041878	rab11ba	56	30.252	ENSDARG00000032708	arl4cb	60	30.252
ENSDARG00000041878	rab11ba	99	41.176	ENSDARG00000036501	rab39bb	98	40.952
ENSDARG00000041878	rab11ba	82	38.547	ENSDARG00000052290	rab33ba	76	39.011
ENSDARG00000041878	rab11ba	64	42.446	ENSDARG00000018107	rab3da	83	42.446
ENSDARG00000041878	rab11ba	75	38.922	ENSDARG00000014058	rab36	64	38.922
ENSDARG00000041878	rab11ba	79	40.854	ENSDARG00000102580	CU571310.1	80	40.000
ENSDARG00000041878	rab11ba	80	51.724	ENSDARG00000035188	rab14l	81	51.724
ENSDARG00000041878	rab11ba	76	40.625	ENSDARG00000021287	rab7b	79	41.718
ENSDARG00000041878	rab11ba	100	64.078	ENSDARG00000052954	rab25b	100	63.470
ENSDARG00000041878	rab11ba	94	32.000	ENSDARG00000031343	rab6bb	91	32.673
ENSDARG00000041878	rab11ba	68	32.168	ENSDARG00000070318	arl8bb	72	31.724
ENSDARG00000041878	rab11ba	92	32.990	ENSDARG00000029885	rab41	87	33.673
ENSDARG00000041878	rab11ba	69	36.552	ENSDARG00000010977	rab34b	61	38.462
ENSDARG00000041878	rab11ba	78	48.428	ENSDARG00000058425	rab35b	82	49.398
ENSDARG00000041878	rab11ba	81	44.910	ENSDARG00000037967	si:dkey-16l2.16	96	50.000
ENSDARG00000041878	rab11ba	78	46.541	ENSDARG00000034771	rab13	83	47.590
ENSDARG00000041878	rab11ba	89	37.113	ENSDARG00000057394	rab33a	83	37.563
ENSDARG00000041878	rab11ba	74	47.020	ENSDARG00000102078	CABZ01072548.1	81	48.734
ENSDARG00000041878	rab11ba	99	45.545	ENSDARG00000052263	rab1aa	99	47.368
ENSDARG00000041878	rab11ba	79	33.742	ENSDARG00000006553	rras	87	34.857
ENSDARG00000041878	rab11ba	79	46.914	ENSDARG00000098344	rab18b	83	46.199
ENSDARG00000041878	rab11ba	78	48.428	ENSDARG00000103934	megf8	95	50.303
ENSDARG00000041878	rab11ba	73	36.000	ENSDARG00000098497	hrasa	85	37.037
ENSDARG00000041878	rab11ba	99	39.109	ENSDARG00000037884	rab30	98	40.476
ENSDARG00000041878	rab11ba	74	36.842	ENSDARG00000013161	zgc:55558	87	37.805
ENSDARG00000041878	rab11ba	75	37.342	ENSDARG00000026098	si:dkey-13a21.4	78	37.500
ENSDARG00000041878	rab11ba	77	32.704	ENSDARG00000062865	mras	84	32.704
ENSDARG00000041878	rab11ba	77	51.190	ENSDARG00000033056	zgc:171927	80	51.190
ENSDARG00000041878	rab11ba	76	43.871	ENSDARG00000026484	rab15	76	44.444
ENSDARG00000041878	rab11ba	74	30.058	ENSDARG00000046013	rasl11a	68	30.058
ENSDARG00000041878	rab11ba	74	35.484	ENSDARG00000038225	nras	87	36.527
ENSDARG00000041878	rab11ba	99	40.196	ENSDARG00000018602	rab5aa	90	40.777
ENSDARG00000041878	rab11ba	100	95.610	ENSDARG00000090086	rab11bb	100	94.954
ENSDARG00000041878	rab11ba	74	33.548	ENSDARG00000045628	rab34a	65	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000041878	rab11ba	100	96.330	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
ENSDARG00000041878	rab11ba	99	95.567	ENSAMEG00000004955	RAB11B	99	94.977	Ailuropoda_melanoleuca
ENSDARG00000041878	rab11ba	86	90.374	ENSACIG00000024374	rab11ba	77	90.374	Amphilophus_citrinellus
ENSDARG00000041878	rab11ba	100	94.495	ENSAOCG00000018050	rab11ba	100	94.495	Amphiprion_ocellaris
ENSDARG00000041878	rab11ba	100	94.037	ENSAPEG00000009177	rab11ba	100	94.037	Amphiprion_percula
ENSDARG00000041878	rab11ba	100	94.495	ENSATEG00000023730	rab11ba	100	94.495	Anabas_testudineus
ENSDARG00000041878	rab11ba	100	96.330	ENSANAG00000037616	RAB11B	100	96.330	Aotus_nancymaae
ENSDARG00000041878	rab11ba	100	92.202	ENSACLG00000005420	rab11ba	100	92.202	Astatotilapia_calliptera
ENSDARG00000041878	rab11ba	99	83.871	ENSACLG00000018852	-	97	83.871	Astatotilapia_calliptera
ENSDARG00000041878	rab11ba	99	80.556	WBGene00004274	rab-11.1	99	80.556	Caenorhabditis_elegans
ENSDARG00000041878	rab11ba	100	96.330	ENSCJAG00000010778	RAB11B	100	96.330	Callithrix_jacchus
ENSDARG00000041878	rab11ba	100	96.330	ENSCAFG00000032060	RAB11B	100	96.330	Canis_familiaris
ENSDARG00000041878	rab11ba	100	96.330	ENSCAFG00020022184	RAB11B	100	96.330	Canis_lupus_dingo
ENSDARG00000041878	rab11ba	100	96.330	ENSTSYG00000014758	RAB11B	100	96.330	Carlito_syrichta
ENSDARG00000041878	rab11ba	100	95.872	ENSCPOG00000030154	RAB11B	100	95.872	Cavia_porcellus
ENSDARG00000041878	rab11ba	100	96.330	ENSCCAG00000031042	RAB11B	100	96.330	Cebus_capucinus
ENSDARG00000041878	rab11ba	100	96.330	ENSCLAG00000003207	RAB11B	100	96.330	Chinchilla_lanigera
ENSDARG00000041878	rab11ba	100	96.330	ENSCSAG00000008024	RAB11B	100	96.330	Chlorocebus_sabaeus
ENSDARG00000041878	rab11ba	100	82.110	ENSCHOG00000013525	RAB11B	100	82.110	Choloepus_hoffmanni
ENSDARG00000041878	rab11ba	100	83.945	ENSCING00000009526	-	100	83.945	Ciona_intestinalis
ENSDARG00000041878	rab11ba	100	96.330	ENSCANG00000040517	RAB11B	100	96.330	Colobus_angolensis_palliatus
ENSDARG00000041878	rab11ba	100	96.330	ENSCGRG00001013827	Rab11b	100	96.330	Cricetulus_griseus_chok1gshd
ENSDARG00000041878	rab11ba	100	96.330	ENSCGRG00000010967	Rab11b	100	96.330	Cricetulus_griseus_crigri
ENSDARG00000041878	rab11ba	100	94.495	ENSCSEG00000007121	rab11ba	84	94.495	Cynoglossus_semilaevis
ENSDARG00000041878	rab11ba	100	96.330	ENSDNOG00000014618	RAB11B	97	96.330	Dasypus_novemcinctus
ENSDARG00000041878	rab11ba	100	94.634	ENSDNOG00000004134	-	100	94.495	Dasypus_novemcinctus
ENSDARG00000041878	rab11ba	100	95.413	ENSDORG00000006304	Rab11b	100	95.413	Dipodomys_ordii
ENSDARG00000041878	rab11ba	100	81.951	ENSEBUG00000015447	-	100	80.734	Eptatretus_burgeri
ENSDARG00000041878	rab11ba	100	91.284	ENSEBUG00000011775	rab11ba	99	91.220	Eptatretus_burgeri
ENSDARG00000041878	rab11ba	66	99.301	ENSEEUG00000009165	-	100	99.301	Erinaceus_europaeus
ENSDARG00000041878	rab11ba	89	92.784	ENSELUG00000019240	-	99	92.784	Esox_lucius
ENSDARG00000041878	rab11ba	100	95.872	ENSFCAG00000015216	RAB11B	100	95.872	Felis_catus
ENSDARG00000041878	rab11ba	100	95.872	ENSFDAG00000019872	RAB11B	100	95.872	Fukomys_damarensis
ENSDARG00000041878	rab11ba	100	94.037	ENSFHEG00000022642	rab11ba	100	94.037	Fundulus_heteroclitus
ENSDARG00000041878	rab11ba	100	94.037	ENSGMOG00000007390	rab11ba	99	94.037	Gadus_morhua
ENSDARG00000041878	rab11ba	100	93.578	ENSGAFG00000005679	rab11ba	100	93.578	Gambusia_affinis
ENSDARG00000041878	rab11ba	100	96.789	ENSGAGG00000012557	-	100	96.789	Gopherus_agassizii
ENSDARG00000041878	rab11ba	100	96.330	ENSHGLG00000014984	RAB11B	100	96.330	Heterocephalus_glaber_female
ENSDARG00000041878	rab11ba	100	95.872	ENSHGLG00100003638	RAB11B	100	95.872	Heterocephalus_glaber_male
ENSDARG00000041878	rab11ba	100	96.330	ENSSTOG00000031571	RAB11B	100	96.330	Ictidomys_tridecemlineatus
ENSDARG00000041878	rab11ba	100	96.330	ENSJJAG00000018891	Rab11b	100	96.330	Jaculus_jaculus
ENSDARG00000041878	rab11ba	100	94.037	ENSKMAG00000006082	-	100	94.037	Kryptolebias_marmoratus
ENSDARG00000041878	rab11ba	100	94.954	ENSLBEG00000006087	rab11ba	100	94.954	Labrus_bergylta
ENSDARG00000041878	rab11ba	78	100.000	ENSLACG00000016974	RAB11B	99	100.000	Latimeria_chalumnae
ENSDARG00000041878	rab11ba	100	96.330	ENSLAFG00000013598	RAB11B	100	96.330	Loxodonta_africana
ENSDARG00000041878	rab11ba	100	96.330	ENSMNEG00000039759	-	100	96.330	Macaca_nemestrina
ENSDARG00000041878	rab11ba	100	93.578	ENSMAMG00000018556	rab11ba	100	93.578	Mastacembelus_armatus
ENSDARG00000041878	rab11ba	100	92.202	ENSMZEG00005010947	rab11ba	100	92.202	Maylandia_zebra
ENSDARG00000041878	rab11ba	99	83.871	ENSMZEG00005019251	-	97	83.871	Maylandia_zebra
ENSDARG00000041878	rab11ba	100	95.872	ENSMAUG00000021579	Rab11b	100	95.872	Mesocricetus_auratus
ENSDARG00000041878	rab11ba	100	95.872	ENSMOCG00000012667	Rab11b	100	95.872	Microtus_ochrogaster
ENSDARG00000041878	rab11ba	100	91.284	ENSMALG00000021949	rab11ba	100	91.284	Monopterus_albus
ENSDARG00000041878	rab11ba	100	96.330	MGP_CAROLIEiJ_G0021415	Rab11b	100	96.330	Mus_caroli
ENSDARG00000041878	rab11ba	100	95.413	ENSMUSG00000077450	Rab11b	97	98.621	Mus_musculus
ENSDARG00000041878	rab11ba	100	96.330	MGP_PahariEiJ_G0020420	Rab11b	100	96.330	Mus_pahari
ENSDARG00000041878	rab11ba	100	96.330	MGP_SPRETEiJ_G0022327	Rab11b	100	96.330	Mus_spretus
ENSDARG00000041878	rab11ba	100	95.872	ENSMPUG00000007263	RAB11B	100	95.872	Mustela_putorius_furo
ENSDARG00000041878	rab11ba	100	91.855	ENSMLUG00000002308	-	100	91.855	Myotis_lucifugus
ENSDARG00000041878	rab11ba	100	96.330	ENSNGAG00000015757	Rab11b	100	96.330	Nannospalax_galili
ENSDARG00000041878	rab11ba	100	92.661	ENSNBRG00000023898	rab11ba	84	92.661	Neolamprologus_brichardi
ENSDARG00000041878	rab11ba	100	96.330	ENSNLEG00000001733	RAB11B	100	96.330	Nomascus_leucogenys
ENSDARG00000041878	rab11ba	100	96.330	ENSODEG00000011371	RAB11B	100	96.330	Octodon_degus
ENSDARG00000041878	rab11ba	100	93.119	ENSONIG00000002535	rab11ba	100	93.119	Oreochromis_niloticus
ENSDARG00000041878	rab11ba	79	96.894	ENSOCUG00000028208	RAB11B	64	97.516	Oryctolagus_cuniculus
ENSDARG00000041878	rab11ba	99	93.548	ENSORLG00000015307	rab11ba	99	93.548	Oryzias_latipes
ENSDARG00000041878	rab11ba	99	93.548	ENSORLG00020020816	rab11ba	99	93.548	Oryzias_latipes_hni
ENSDARG00000041878	rab11ba	99	93.981	ENSORLG00015016946	rab11ba	81	93.981	Oryzias_latipes_hsok
ENSDARG00000041878	rab11ba	99	93.548	ENSOMEG00000002581	rab11ba	99	93.548	Oryzias_melastigma
ENSDARG00000041878	rab11ba	100	96.330	ENSOGAG00000003227	RAB11B	99	96.330	Otolemur_garnettii
ENSDARG00000041878	rab11ba	100	96.330	ENSOARG00000003801	RAB11B	97	96.330	Ovis_aries
ENSDARG00000041878	rab11ba	89	87.940	ENSPPRG00000010160	RAB11B	98	87.940	Panthera_pardus
ENSDARG00000041878	rab11ba	100	96.330	ENSPEMG00000014536	Rab11b	100	96.330	Peromyscus_maniculatus_bairdii
ENSDARG00000041878	rab11ba	100	79.524	ENSPMAG00000009335	-	100	80.000	Petromyzon_marinus
ENSDARG00000041878	rab11ba	100	94.037	ENSPFOG00000006159	rab11ba	100	94.037	Poecilia_formosa
ENSDARG00000041878	rab11ba	100	94.037	ENSPLAG00000014243	rab11ba	100	94.037	Poecilia_latipinna
ENSDARG00000041878	rab11ba	100	94.037	ENSPMEG00000007917	rab11ba	75	94.037	Poecilia_mexicana
ENSDARG00000041878	rab11ba	100	94.037	ENSPREG00000006357	rab11ba	78	94.037	Poecilia_reticulata
ENSDARG00000041878	rab11ba	100	96.330	ENSPPYG00000009504	RAB11B	100	96.330	Pongo_abelii
ENSDARG00000041878	rab11ba	100	87.615	ENSPCAG00000016118	RAB11B	100	87.615	Procavia_capensis
ENSDARG00000041878	rab11ba	100	96.330	ENSPCOG00000028053	RAB11B	100	96.330	Propithecus_coquereli
ENSDARG00000041878	rab11ba	67	97.260	ENSPCOG00000008655	-	100	97.260	Propithecus_coquereli
ENSDARG00000041878	rab11ba	100	96.330	ENSPVAG00000009645	RAB11B	100	96.330	Pteropus_vampyrus
ENSDARG00000041878	rab11ba	93	78.049	ENSPNYG00000023810	-	90	78.049	Pundamilia_nyererei
ENSDARG00000041878	rab11ba	100	92.202	ENSPNYG00000019644	rab11ba	100	92.202	Pundamilia_nyererei
ENSDARG00000041878	rab11ba	100	97.706	ENSPNAG00000020475	rab11ba	100	97.706	Pygocentrus_nattereri
ENSDARG00000041878	rab11ba	100	96.585	ENSPNAG00000006431	-	100	96.330	Pygocentrus_nattereri
ENSDARG00000041878	rab11ba	100	96.330	ENSRNOG00000007648	Rab11b	100	96.330	Rattus_norvegicus
ENSDARG00000041878	rab11ba	100	96.330	ENSSBOG00000035094	RAB11B	100	96.330	Saimiri_boliviensis_boliviensis
ENSDARG00000041878	rab11ba	100	94.037	ENSSDUG00000002965	rab11ba	100	94.037	Seriola_dumerili
ENSDARG00000041878	rab11ba	100	94.037	ENSSLDG00000005221	rab11ba	100	94.037	Seriola_lalandi_dorsalis
ENSDARG00000041878	rab11ba	100	94.037	ENSSPAG00000017313	rab11ba	100	94.037	Stegastes_partitus
ENSDARG00000041878	rab11ba	100	96.330	ENSSSCG00000013600	RAB11B	100	96.330	Sus_scrofa
ENSDARG00000041878	rab11ba	63	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSDARG00000041878	rab11ba	100	96.330	ENSTTRG00000009758	RAB11B	100	96.330	Tursiops_truncatus
ENSDARG00000041878	rab11ba	93	81.675	ENSUMAG00000014594	RAB11B	91	79.897	Ursus_maritimus
ENSDARG00000041878	rab11ba	100	96.330	ENSVVUG00000025210	RAB11B	100	96.330	Vulpes_vulpes
ENSDARG00000041878	rab11ba	100	94.037	ENSXETG00000021890	rab11b.2	99	94.037	Xenopus_tropicalis
ENSDARG00000041878	rab11ba	61	98.496	ENSXCOG00000009194	-	98	98.496	Xiphophorus_couchianus
ENSDARG00000041878	rab11ba	100	93.578	ENSXMAG00000013416	rab11ba	100	93.578	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005768	endosome	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006887	exocytosis	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0055037	recycling endosome	21873635.	IBA	Component