EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000041895 (Gene tree)
Gene ID: 266992
Gene Symbol: cad
Alias: cb456|si:dkey-221h15.3|wu:fc30c12|wu:fc33d01|wu:fc67g02
Full Name: carbamoyl-phosphate synthetase 2%2C aspartate transcarbamylase%2C and dihydroorotase
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 39305 bases
Position: chr20:38788319-38827623
Accession: ZDB-GENE-021030-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000127377	RimK	PF08443.11	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000153310	-	7486	XM_005160811	ENSDARP00000127377	2230 (aa)	XP_005160868	U3JAV8
ENSDART00000125333	-	1454	-	ENSDARP00000106816	485 (aa)	-	F1Q9V4
ENSDART00000152881	-	525	-	-	- (aa)	-	-
ENSDART00000153383	-	791	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000041895's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00240	Pyrimidine metabolism	KEGG
dre00250	Alanine, aspartate and glutamate metabolism	KEGG
dre01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000041895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000041895	cad	99	87.360	ENSACIG00000001012	cad	100	87.360	Amphilophus_citrinellus
ENSDARG00000041895	cad	99	73.687	ENSANAG00000022610	CAD	99	73.776	Aotus_nancymaae
ENSDARG00000041895	cad	99	86.410	ENSACLG00000002358	cad	99	86.410	Astatotilapia_calliptera
ENSDARG00000041895	cad	99	73.108	ENSCJAG00000001126	CAD	99	73.731	Callithrix_jacchus
ENSDARG00000041895	cad	98	75.722	ENSCAFG00000004767	CAD	99	75.767	Canis_familiaris
ENSDARG00000041895	cad	97	87.435	ENSCAFG00020024313	CAD	99	87.435	Canis_lupus_dingo
ENSDARG00000041895	cad	99	73.508	ENSCHIG00000022371	CAD	99	73.598	Capra_hircus
ENSDARG00000041895	cad	99	74.043	ENSCCAG00000037042	CAD	99	74.043	Cebus_capucinus
ENSDARG00000041895	cad	99	73.687	ENSCATG00000029790	CAD	99	73.687	Cercocebus_atys
ENSDARG00000041895	cad	99	78.154	ENSCPBG00000019255	CAD	99	78.154	Chrysemys_picta_bellii
ENSDARG00000041895	cad	99	73.508	ENSCANG00000033265	CAD	99	73.508	Colobus_angolensis_palliatus
ENSDARG00000041895	cad	99	73.598	ENSCGRG00001017687	Cad	99	73.598	Cricetulus_griseus_chok1gshd
ENSDARG00000041895	cad	99	73.598	ENSCGRG00000008756	Cad	99	73.598	Cricetulus_griseus_crigri
ENSDARG00000041895	cad	97	88.482	ENSEASG00005009550	CAD	99	88.482	Equus_asinus_asinus
ENSDARG00000041895	cad	90	79.575	ENSGAGG00000008166	CAD	98	79.575	Gopherus_agassizii
ENSDARG00000041895	cad	99	73.378	ENSGGOG00000011620	CAD	99	73.467	Gorilla_gorilla
ENSDARG00000041895	cad	99	73.508	ENSSTOG00000011317	CAD	99	73.598	Ictidomys_tridecemlineatus
ENSDARG00000041895	cad	97	87.958	ENSJJAG00000022080	Cad	99	87.958	Jaculus_jaculus
ENSDARG00000041895	cad	96	85.387	ENSKMAG00000012829	cad	99	85.387	Kryptolebias_marmoratus
ENSDARG00000041895	cad	99	73.642	ENSMFAG00000036356	CAD	99	73.642	Macaca_fascicularis
ENSDARG00000041895	cad	99	73.642	ENSMMUG00000010269	ATRAID	99	73.642	Macaca_mulatta
ENSDARG00000041895	cad	99	73.642	ENSMLEG00000031669	CAD	99	73.642	Mandrillus_leucophaeus
ENSDARG00000041895	cad	99	80.785	ENSMZEG00005019557	cad	100	80.785	Maylandia_zebra
ENSDARG00000041895	cad	99	73.630	ENSMAUG00000003111	Cad	99	73.630	Mesocricetus_auratus
ENSDARG00000041895	cad	99	73.508	ENSMICG00000017084	CAD	99	73.514	Microcebus_murinus
ENSDARG00000041895	cad	99	73.898	ENSMOCG00000004643	Cad	99	73.898	Microtus_ochrogaster
ENSDARG00000041895	cad	99	75.812	ENSMODG00000015693	CAD	99	75.812	Monodelphis_domestica
ENSDARG00000041895	cad	99	73.586	MGP_PahariEiJ_G0029306	Cad	99	73.469	Mus_pahari
ENSDARG00000041895	cad	99	73.318	ENSNGAG00000010023	Cad	99	73.408	Nannospalax_galili
ENSDARG00000041895	cad	99	86.083	ENSONIG00000015784	cad	100	86.172	Oreochromis_niloticus
ENSDARG00000041895	cad	74	84.944	ENSOANG00000003933	CAD	87	84.944	Ornithorhynchus_anatinus
ENSDARG00000041895	cad	99	73.467	ENSPPAG00000041472	CAD	99	73.556	Pan_paniscus
ENSDARG00000041895	cad	99	73.654	ENSPPRG00000000884	CAD	99	73.743	Panthera_pardus
ENSDARG00000041895	cad	99	73.467	ENSPTRG00000011756	CAD	99	73.556	Pan_troglodytes
ENSDARG00000041895	cad	99	73.598	ENSPANG00000015738	CAD	99	73.598	Papio_anubis
ENSDARG00000041895	cad	100	82.960	ENSPKIG00000015585	cad	100	82.960	Paramormyrops_kingsleyae
ENSDARG00000041895	cad	99	73.808	ENSPEMG00000007285	Cad	99	73.898	Peromyscus_maniculatus_bairdii
ENSDARG00000041895	cad	99	72.294	ENSPCIG00000012616	CAD	99	74.758	Phascolarctos_cinereus
ENSDARG00000041895	cad	99	73.642	ENSPCOG00000023312	CAD	99	73.731	Propithecus_coquereli
ENSDARG00000041895	cad	99	73.553	ENSRBIG00000022214	CAD	99	73.553	Rhinopithecus_bieti
ENSDARG00000041895	cad	99	73.553	ENSRROG00000036713	CAD	99	76.842	Rhinopithecus_roxellana
ENSDARG00000041895	cad	99	73.241	ENSSBOG00000033880	CAD	99	73.330	Saimiri_boliviensis_boliviensis
ENSDARG00000041895	cad	99	74.699	ENSSHAG00000012598	CAD	99	74.699	Sarcophilus_harrisii
ENSDARG00000041895	cad	99	82.825	ENSSDUG00000003396	cad	100	82.825	Seriola_dumerili
ENSDARG00000041895	cad	99	86.372	ENSSLDG00000007917	cad	99	86.372	Seriola_lalandi_dorsalis
ENSDARG00000041895	cad	97	87.435	ENSUAMG00000006932	CAD	99	87.435	Ursus_americanus
ENSDARG00000041895	cad	99	74.821	ENSUMAG00000020632	CAD	99	74.821	Ursus_maritimus
ENSDARG00000041895	cad	83	80.428	ENSXETG00000016401	cad	99	80.428	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0001946	lymphangiogenesis	25294789.	IMP	Process
GO:0004070	aspartate carbamoyltransferase activity	21873635.	IBA	Function
GO:0004070	aspartate carbamoyltransferase activity	-	IEA	Function
GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	21873635.	IBA	Function
GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	-	IEA	Function
GO:0004151	dihydroorotase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	21873635.	IBA	Process
GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	-	IEA	Process
GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	15937129.	IMP	Process
GO:0006228	UTP biosynthetic process	21873635.	IBA	Process
GO:0006520	cellular amino acid metabolic process	-	IEA	Process
GO:0006541	glutamine metabolic process	21873635.	IBA	Process
GO:0006541	glutamine metabolic process	-	IEA	Process
GO:0006807	nitrogen compound metabolic process	21873635.	IBA	Process
GO:0006807	nitrogen compound metabolic process	-	IEA	Process
GO:0008593	regulation of Notch signaling pathway	25294789.	IMP	Process
GO:0016597	amino acid binding	-	IEA	Function
GO:0016743	carboxyl- or carbamoyltransferase activity	-	IEA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	IEA	Function
GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	-	IEA	Function
GO:0019240	citrulline biosynthetic process	21873635.	IBA	Process
GO:0021610	facial nerve morphogenesis	24280100.	IMP	Process
GO:0021615	glossopharyngeal nerve morphogenesis	24280100.	IMP	Process
GO:0021636	trigeminal nerve morphogenesis	24280100.	IMP	Process
GO:0021644	vagus nerve morphogenesis	24280100.	IMP	Process
GO:0030947	regulation of vascular endothelial growth factor receptor signaling pathway	25294789.	IGI	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048812	neuron projection morphogenesis	24280100.	IMP	Process
GO:0060041	retina development in camera-type eye	11476583.	IMP	Process
GO:1900746	regulation of vascular endothelial growth factor signaling pathway	25294789.	IGI	Process