EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000042057 (Gene tree)
Gene ID: 559583
Gene Symbol: trmt1l
Alias: im:7142104|si:dkeyp-11g8.5
Full Name: tRNA methyltransferase 1-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 11018 bases
Position: chr20:34388425-34399442
Accession: ZDB-GENE-041014-189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000156040	TRM	PF02005.16	9.8e-68	1	2
ENSDARP00000156040	TRM	PF02005.16	9.8e-68	2	2
ENSDARP00000114812	TRM	PF02005.16	1.3e-67	1	2
ENSDARP00000114812	TRM	PF02005.16	1.3e-67	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000153031	-	781	-	-	- (aa)	-	-
ENSDART00000139648	-	641	-	ENSDARP00000121707	213 (aa)	-	F1R3Q4
ENSDART00000146924	-	2523	XM_682939	ENSDARP00000114812	694 (aa)	XP_688031	F1QK14
ENSDART00000183596	-	1932	-	ENSDARP00000156040	643 (aa)	-	A0A2R8QS20

Gene Model

Click here to download ENSDARG00000042057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000042057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000042057	trmt1l	95	63.339	ENSG00000121486	TRMT1L	99	70.952	Homo_sapiens
ENSDARG00000042057	trmt1l	98	77.876	ENSAPOG00000011807	trmt1l	98	77.876	Acanthochromis_polyacanthus
ENSDARG00000042057	trmt1l	94	63.011	ENSAMEG00000013538	TRMT1L	87	60.648	Ailuropoda_melanoleuca
ENSDARG00000042057	trmt1l	74	78.958	ENSACIG00000012049	trmt1l	92	78.958	Amphilophus_citrinellus
ENSDARG00000042057	trmt1l	98	77.729	ENSAOCG00000018112	trmt1l	98	77.729	Amphiprion_ocellaris
ENSDARG00000042057	trmt1l	98	77.434	ENSAPEG00000021433	trmt1l	97	81.759	Amphiprion_percula
ENSDARG00000042057	trmt1l	94	83.003	ENSATEG00000004573	trmt1l	99	83.007	Anabas_testudineus
ENSDARG00000042057	trmt1l	93	68.220	ENSAPLG00000008394	TRMT1L	88	65.773	Anas_platyrhynchos
ENSDARG00000042057	trmt1l	93	65.890	ENSACAG00000002342	TRMT1L	94	60.888	Anolis_carolinensis
ENSDARG00000042057	trmt1l	95	63.175	ENSANAG00000038162	TRMT1L	87	60.957	Aotus_nancymaae
ENSDARG00000042057	trmt1l	98	76.912	ENSACLG00000021625	trmt1l	98	76.799	Astatotilapia_calliptera
ENSDARG00000042057	trmt1l	98	87.187	ENSAMXG00000009602	trmt1l	97	87.187	Astyanax_mexicanus
ENSDARG00000042057	trmt1l	94	63.029	ENSBTAG00000011285	TRMT1L	87	60.522	Bos_taurus
ENSDARG00000042057	trmt1l	95	63.175	ENSCJAG00000005456	TRMT1L	88	60.957	Callithrix_jacchus
ENSDARG00000042057	trmt1l	95	63.235	ENSCAFG00000013518	TRMT1L	85	60.863	Canis_familiaris
ENSDARG00000042057	trmt1l	95	63.235	ENSCAFG00020015640	TRMT1L	87	60.863	Canis_lupus_dingo
ENSDARG00000042057	trmt1l	94	63.029	ENSCHIG00000016522	TRMT1L	87	60.522	Capra_hircus
ENSDARG00000042057	trmt1l	95	63.339	ENSTSYG00000010465	TRMT1L	97	56.522	Carlito_syrichta
ENSDARG00000042057	trmt1l	74	60.465	ENSCAPG00000012562	TRMT1L	83	60.769	Cavia_aperea
ENSDARG00000042057	trmt1l	94	62.069	ENSCPOG00000001567	TRMT1L	88	60.308	Cavia_porcellus
ENSDARG00000042057	trmt1l	94	63.140	ENSCCAG00000018699	TRMT1L	86	60.903	Cebus_capucinus
ENSDARG00000042057	trmt1l	95	63.666	ENSCATG00000043114	TRMT1L	87	61.420	Cercocebus_atys
ENSDARG00000042057	trmt1l	95	63.502	ENSCLAG00000010801	-	88	61.385	Chinchilla_lanigera
ENSDARG00000042057	trmt1l	94	48.675	ENSCLAG00000010853	-	85	48.212	Chinchilla_lanigera
ENSDARG00000042057	trmt1l	95	63.666	ENSCSAG00000012880	TRMT1L	87	61.420	Chlorocebus_sabaeus
ENSDARG00000042057	trmt1l	53	71.605	ENSCHOG00000011164	TRMT1L	56	71.605	Choloepus_hoffmanni
ENSDARG00000042057	trmt1l	94	67.492	ENSCPBG00000015694	TRMT1L	90	64.373	Chrysemys_picta_bellii
ENSDARG00000042057	trmt1l	95	63.830	ENSCANG00000031107	TRMT1L	87	61.574	Colobus_angolensis_palliatus
ENSDARG00000042057	trmt1l	94	61.614	ENSCGRG00001019297	Trmt1l	87	59.414	Cricetulus_griseus_chok1gshd
ENSDARG00000042057	trmt1l	94	61.614	ENSCGRG00000005036	Trmt1l	87	59.414	Cricetulus_griseus_crigri
ENSDARG00000042057	trmt1l	99	75.797	ENSCSEG00000001248	trmt1l	99	75.797	Cynoglossus_semilaevis
ENSDARG00000042057	trmt1l	97	75.148	ENSCVAG00000012274	trmt1l	99	74.273	Cyprinodon_variegatus
ENSDARG00000042057	trmt1l	95	62.848	ENSDNOG00000005239	TRMT1L	87	60.494	Dasypus_novemcinctus
ENSDARG00000042057	trmt1l	85	61.552	ENSDORG00000003298	Trmt1l	83	61.552	Dipodomys_ordii
ENSDARG00000042057	trmt1l	82	57.243	ENSETEG00000015895	TRMT1L	77	57.243	Echinops_telfairi
ENSDARG00000042057	trmt1l	91	47.766	ENSEBUG00000010301	trmt1l	93	47.078	Eptatretus_burgeri
ENSDARG00000042057	trmt1l	94	60.820	ENSEASG00005005551	TRMT1L	84	59.874	Equus_asinus_asinus
ENSDARG00000042057	trmt1l	94	62.890	ENSECAG00000020999	TRMT1L	79	61.867	Equus_caballus
ENSDARG00000042057	trmt1l	94	56.650	ENSEEUG00000014110	TRMT1L	90	55.416	Erinaceus_europaeus
ENSDARG00000042057	trmt1l	93	84.859	ENSELUG00000020587	trmt1l	99	79.971	Esox_lucius
ENSDARG00000042057	trmt1l	94	63.577	ENSFCAG00000011285	TRMT1L	86	62.401	Felis_catus
ENSDARG00000042057	trmt1l	93	66.389	ENSFALG00000003177	TRMT1L	95	64.388	Ficedula_albicollis
ENSDARG00000042057	trmt1l	95	62.378	ENSFDAG00000008822	TRMT1L	88	60.736	Fukomys_damarensis
ENSDARG00000042057	trmt1l	83	81.343	ENSFHEG00000014328	trmt1l	99	81.343	Fundulus_heteroclitus
ENSDARG00000042057	trmt1l	93	79.934	ENSGMOG00000009535	trmt1l	99	79.173	Gadus_morhua
ENSDARG00000042057	trmt1l	93	66.834	ENSGALG00000033077	TRMT1L	86	61.961	Gallus_gallus
ENSDARG00000042057	trmt1l	99	74.855	ENSGAFG00000012445	trmt1l	99	74.855	Gambusia_affinis
ENSDARG00000042057	trmt1l	99	77.090	ENSGACG00000005050	trmt1l	99	79.049	Gasterosteus_aculeatus
ENSDARG00000042057	trmt1l	94	68.264	ENSGAGG00000007441	TRMT1L	90	61.582	Gopherus_agassizii
ENSDARG00000042057	trmt1l	95	63.339	ENSGGOG00000011778	TRMT1L	87	61.111	Gorilla_gorilla
ENSDARG00000042057	trmt1l	98	76.393	ENSHBUG00000000622	trmt1l	99	78.049	Haplochromis_burtoni
ENSDARG00000042057	trmt1l	88	61.579	ENSHGLG00000003135	-	88	58.044	Heterocephalus_glaber_female
ENSDARG00000042057	trmt1l	91	49.846	ENSHGLG00000012595	-	92	49.307	Heterocephalus_glaber_female
ENSDARG00000042057	trmt1l	95	62.193	ENSHGLG00100019412	-	88	60.615	Heterocephalus_glaber_male
ENSDARG00000042057	trmt1l	91	49.846	ENSHGLG00100004569	-	92	49.307	Heterocephalus_glaber_male
ENSDARG00000042057	trmt1l	98	79.616	ENSIPUG00000008873	trmt1l	99	79.616	Ictalurus_punctatus
ENSDARG00000042057	trmt1l	95	63.132	ENSSTOG00000010332	TRMT1L	87	60.802	Ictidomys_tridecemlineatus
ENSDARG00000042057	trmt1l	94	62.211	ENSJJAG00000010929	Trmt1l	91	59.542	Jaculus_jaculus
ENSDARG00000042057	trmt1l	94	75.974	ENSKMAG00000010310	trmt1l	92	76.461	Kryptolebias_marmoratus
ENSDARG00000042057	trmt1l	90	75.949	ENSLBEG00000007982	-	100	75.949	Labrus_bergylta
ENSDARG00000042057	trmt1l	98	76.204	ENSLBEG00000003487	trmt1l	99	76.204	Labrus_bergylta
ENSDARG00000042057	trmt1l	93	68.377	ENSLACG00000008447	TRMT1L	96	64.211	Latimeria_chalumnae
ENSDARG00000042057	trmt1l	99	76.812	ENSLOCG00000001781	trmt1l	99	76.812	Lepisosteus_oculatus
ENSDARG00000042057	trmt1l	94	62.890	ENSLAFG00000004339	TRMT1L	87	60.836	Loxodonta_africana
ENSDARG00000042057	trmt1l	95	63.502	ENSMFAG00000037592	TRMT1L	87	61.265	Macaca_fascicularis
ENSDARG00000042057	trmt1l	95	63.502	ENSMMUG00000013879	TRMT1L	95	59.111	Macaca_mulatta
ENSDARG00000042057	trmt1l	95	63.666	ENSMNEG00000041637	TRMT1L	87	61.420	Macaca_nemestrina
ENSDARG00000042057	trmt1l	95	63.666	ENSMLEG00000004840	TRMT1L	87	61.420	Mandrillus_leucophaeus
ENSDARG00000042057	trmt1l	98	76.582	ENSMAMG00000015305	trmt1l	98	78.240	Mastacembelus_armatus
ENSDARG00000042057	trmt1l	98	77.059	ENSMZEG00005017822	trmt1l	98	77.059	Maylandia_zebra
ENSDARG00000042057	trmt1l	93	67.169	ENSMGAG00000000930	TRMT1L	95	65.238	Meleagris_gallopavo
ENSDARG00000042057	trmt1l	93	58.902	ENSMAUG00000019870	Trmt1l	88	56.744	Mesocricetus_auratus
ENSDARG00000042057	trmt1l	93	64.226	ENSMICG00000009494	TRMT1L	86	61.755	Microcebus_murinus
ENSDARG00000042057	trmt1l	94	61.794	ENSMOCG00000016453	Trmt1l	87	59.443	Microtus_ochrogaster
ENSDARG00000042057	trmt1l	94	79.174	ENSMMOG00000016961	trmt1l	96	79.174	Mola_mola
ENSDARG00000042057	trmt1l	93	68.099	ENSMODG00000007454	TRMT1L	77	63.462	Monodelphis_domestica
ENSDARG00000042057	trmt1l	98	77.647	ENSMALG00000019306	trmt1l	98	77.647	Monopterus_albus
ENSDARG00000042057	trmt1l	92	62.818	MGP_CAROLIEiJ_G0014693	Trmt1l	85	60.952	Mus_caroli
ENSDARG00000042057	trmt1l	92	62.395	ENSMUSG00000053286	Trmt1l	85	60.443	Mus_musculus
ENSDARG00000042057	trmt1l	94	61.148	MGP_PahariEiJ_G0027929	Trmt1l	85	60.635	Mus_pahari
ENSDARG00000042057	trmt1l	78	64.141	MGP_SPRETEiJ_G0015500	Trmt1l	83	61.149	Mus_spretus
ENSDARG00000042057	trmt1l	95	58.987	ENSMPUG00000011859	TRMT1L	88	57.319	Mustela_putorius_furo
ENSDARG00000042057	trmt1l	95	63.502	ENSMLUG00000001136	TRMT1L	89	61.111	Myotis_lucifugus
ENSDARG00000042057	trmt1l	94	61.842	ENSNGAG00000011685	Trmt1l	88	59.815	Nannospalax_galili
ENSDARG00000042057	trmt1l	75	76.907	ENSNBRG00000004053	trmt1l	86	77.328	Neolamprologus_brichardi
ENSDARG00000042057	trmt1l	95	63.666	ENSNLEG00000018030	TRMT1L	87	61.420	Nomascus_leucogenys
ENSDARG00000042057	trmt1l	79	60.656	ENSMEUG00000011344	TRMT1L	81	60.656	Notamacropus_eugenii
ENSDARG00000042057	trmt1l	87	60.387	ENSOPRG00000000680	TRMT1L	85	60.387	Ochotona_princeps
ENSDARG00000042057	trmt1l	94	60.992	ENSODEG00000000826	TRMT1L	87	58.723	Octodon_degus
ENSDARG00000042057	trmt1l	97	79.459	ENSONIG00000007823	trmt1l	99	80.732	Oreochromis_niloticus
ENSDARG00000042057	trmt1l	92	67.851	ENSOANG00000001010	TRMT1L	94	65.655	Ornithorhynchus_anatinus
ENSDARG00000042057	trmt1l	92	63.926	ENSOCUG00000004896	TRMT1L	88	61.478	Oryctolagus_cuniculus
ENSDARG00000042057	trmt1l	91	84.103	ENSORLG00000029610	trmt1l	97	83.500	Oryzias_latipes
ENSDARG00000042057	trmt1l	91	83.932	ENSORLG00020002203	trmt1l	97	77.729	Oryzias_latipes_hni
ENSDARG00000042057	trmt1l	91	83.932	ENSORLG00015021512	trmt1l	97	77.729	Oryzias_latipes_hsok
ENSDARG00000042057	trmt1l	83	91.304	ENSOMEG00000016275	trmt1l	87	91.304	Oryzias_melastigma
ENSDARG00000042057	trmt1l	95	58.143	ENSOGAG00000016186	TRMT1L	98	57.686	Otolemur_garnettii
ENSDARG00000042057	trmt1l	94	63.029	ENSOARG00000003786	TRMT1L	87	60.522	Ovis_aries
ENSDARG00000042057	trmt1l	95	63.339	ENSPPAG00000029141	TRMT1L	87	61.111	Pan_paniscus
ENSDARG00000042057	trmt1l	94	63.577	ENSPPRG00000023981	TRMT1L	88	61.196	Panthera_pardus
ENSDARG00000042057	trmt1l	94	63.577	ENSPTIG00000021754	TRMT1L	88	61.196	Panthera_tigris_altaica
ENSDARG00000042057	trmt1l	95	63.339	ENSPTRG00000001776	TRMT1L	87	61.111	Pan_troglodytes
ENSDARG00000042057	trmt1l	95	61.866	ENSPANG00000020890	TRMT1L	87	59.568	Papio_anubis
ENSDARG00000042057	trmt1l	97	81.645	ENSPKIG00000005941	trmt1l	97	81.645	Paramormyrops_kingsleyae
ENSDARG00000042057	trmt1l	94	67.438	ENSPSIG00000010011	TRMT1L	91	66.401	Pelodiscus_sinensis
ENSDARG00000042057	trmt1l	89	68.430	ENSPMGG00000021359	trmt1l	99	69.113	Periophthalmus_magnuspinnatus
ENSDARG00000042057	trmt1l	94	61.614	ENSPEMG00000000031	Trmt1l	88	59.752	Peromyscus_maniculatus_bairdii
ENSDARG00000042057	trmt1l	93	58.920	ENSPMAG00000005838	trmt1l	100	57.698	Petromyzon_marinus
ENSDARG00000042057	trmt1l	93	68.439	ENSPCIG00000002409	TRMT1L	85	65.480	Phascolarctos_cinereus
ENSDARG00000042057	trmt1l	99	76.507	ENSPFOG00000003872	trmt1l	99	77.434	Poecilia_formosa
ENSDARG00000042057	trmt1l	99	76.052	ENSPLAG00000010387	trmt1l	99	76.052	Poecilia_latipinna
ENSDARG00000042057	trmt1l	99	76.197	ENSPMEG00000011828	trmt1l	99	81.015	Poecilia_mexicana
ENSDARG00000042057	trmt1l	99	75.832	ENSPREG00000002866	trmt1l	99	75.832	Poecilia_reticulata
ENSDARG00000042057	trmt1l	95	63.502	ENSPPYG00000000416	TRMT1L	87	61.265	Pongo_abelii
ENSDARG00000042057	trmt1l	81	66.509	ENSPCAG00000008257	TRMT1L	75	63.542	Procavia_capensis
ENSDARG00000042057	trmt1l	78	50.276	ENSPCOG00000005682	TRMT1L	85	41.628	Propithecus_coquereli
ENSDARG00000042057	trmt1l	81	73.016	ENSPVAG00000005961	TRMT1L	71	73.016	Pteropus_vampyrus
ENSDARG00000042057	trmt1l	98	73.971	ENSPNYG00000005607	trmt1l	99	78.211	Pundamilia_nyererei
ENSDARG00000042057	trmt1l	99	85.137	ENSPNAG00000004389	trmt1l	99	85.137	Pygocentrus_nattereri
ENSDARG00000042057	trmt1l	91	62.692	ENSRNOG00000002580	Trmt1l	85	60.669	Rattus_norvegicus
ENSDARG00000042057	trmt1l	95	63.666	ENSRBIG00000042589	TRMT1L	87	61.420	Rhinopithecus_bieti
ENSDARG00000042057	trmt1l	95	63.666	ENSRROG00000032183	TRMT1L	87	61.420	Rhinopithecus_roxellana
ENSDARG00000042057	trmt1l	94	63.967	ENSSBOG00000029282	TRMT1L	86	61.838	Saimiri_boliviensis_boliviensis
ENSDARG00000042057	trmt1l	98	80.588	ENSSFOG00015004878	trmt1l	98	80.588	Scleropages_formosus
ENSDARG00000042057	trmt1l	68	78.979	ENSSMAG00000015425	trmt1l	98	80.347	Scophthalmus_maximus
ENSDARG00000042057	trmt1l	98	80.438	ENSSDUG00000021807	trmt1l	99	85.314	Seriola_dumerili
ENSDARG00000042057	trmt1l	93	84.975	ENSSLDG00000016579	trmt1l	99	85.149	Seriola_lalandi_dorsalis
ENSDARG00000042057	trmt1l	72	64.235	ENSSARG00000010135	TRMT1L	85	64.235	Sorex_araneus
ENSDARG00000042057	trmt1l	92	69.815	ENSSPUG00000003927	TRMT1L	99	67.590	Sphenodon_punctatus
ENSDARG00000042057	trmt1l	94	82.508	ENSSPAG00000008597	trmt1l	100	77.746	Stegastes_partitus
ENSDARG00000042057	trmt1l	94	62.069	ENSSSCG00000021393	TRMT1L	83	59.754	Sus_scrofa
ENSDARG00000042057	trmt1l	94	65.902	ENSTGUG00000003737	TRMT1L	92	64.353	Taeniopygia_guttata
ENSDARG00000042057	trmt1l	94	73.366	ENSTRUG00000002396	trmt1l	100	73.438	Takifugu_rubripes
ENSDARG00000042057	trmt1l	65	76.651	ENSTNIG00000005534	trmt1l	99	76.651	Tetraodon_nigroviridis
ENSDARG00000042057	trmt1l	76	60.991	ENSTBEG00000016498	TRMT1L	73	58.788	Tupaia_belangeri
ENSDARG00000042057	trmt1l	92	61.977	ENSTTRG00000005892	TRMT1L	85	59.810	Tursiops_truncatus
ENSDARG00000042057	trmt1l	94	63.011	ENSUAMG00000020936	TRMT1L	87	60.648	Ursus_americanus
ENSDARG00000042057	trmt1l	94	63.011	ENSUMAG00000021919	TRMT1L	86	60.648	Ursus_maritimus
ENSDARG00000042057	trmt1l	94	63.192	ENSVPAG00000011854	TRMT1L	97	61.051	Vicugna_pacos
ENSDARG00000042057	trmt1l	95	63.235	ENSVVUG00000009166	TRMT1L	87	60.863	Vulpes_vulpes
ENSDARG00000042057	trmt1l	74	60.127	ENSXETG00000004539	trmt1l	94	59.756	Xenopus_tropicalis
ENSDARG00000042057	trmt1l	91	76.142	ENSXCOG00000007372	trmt1l	90	76.142	Xiphophorus_couchianus
ENSDARG00000042057	trmt1l	99	75.000	ENSXMAG00000003575	trmt1l	99	76.329	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0002940	tRNA N2-guanine methylation	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	21873635.	IBA	Function
GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function