EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000042344 (Gene tree)
Gene ID: 563475
Gene Symbol: trmt6
Alias: zgc:123193
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 17984 bases
Position: chr20:45754323-45772306
Accession: ZDB-GENE-051120-141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000062091	Gcd10p	PF04189.13	2.9e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000062092	-	1715	-	ENSDARP00000062091	464 (aa)	-	F1QFE5

Gene Model

Click here to download ENSDARG00000042344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000042344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000042344	trmt6	97	57.495	ENSG00000089195	TRMT6	97	58.111	Homo_sapiens
ENSDARG00000042344	trmt6	98	69.890	ENSAPOG00000008036	trmt6	99	69.890	Acanthochromis_polyacanthus
ENSDARG00000042344	trmt6	97	58.178	ENSAMEG00000010635	TRMT6	97	58.178	Ailuropoda_melanoleuca
ENSDARG00000042344	trmt6	97	66.815	ENSACIG00000004608	trmt6	98	66.667	Amphilophus_citrinellus
ENSDARG00000042344	trmt6	97	69.556	ENSAOCG00000024322	trmt6	99	69.316	Amphiprion_ocellaris
ENSDARG00000042344	trmt6	97	69.397	ENSAPEG00000017334	trmt6	99	69.397	Amphiprion_percula
ENSDARG00000042344	trmt6	90	69.977	ENSATEG00000018498	trmt6	96	69.977	Anabas_testudineus
ENSDARG00000042344	trmt6	90	58.628	ENSAPLG00000007761	TRMT6	98	58.628	Anas_platyrhynchos
ENSDARG00000042344	trmt6	95	58.547	ENSACAG00000000575	TRMT6	98	58.547	Anolis_carolinensis
ENSDARG00000042344	trmt6	97	58.058	ENSANAG00000021260	TRMT6	97	58.678	Aotus_nancymaae
ENSDARG00000042344	trmt6	97	65.880	ENSACLG00000026034	trmt6	97	65.880	Astatotilapia_calliptera
ENSDARG00000042344	trmt6	99	74.051	ENSAMXG00000017116	trmt6	99	74.473	Astyanax_mexicanus
ENSDARG00000042344	trmt6	96	59.081	ENSBTAG00000001314	TRMT6	96	59.244	Bos_taurus
ENSDARG00000042344	trmt6	90	30.787	WBGene00014120	ZK858.7	93	30.698	Caenorhabditis_elegans
ENSDARG00000042344	trmt6	97	57.350	ENSCJAG00000021296	TRMT6	97	57.971	Callithrix_jacchus
ENSDARG00000042344	trmt6	97	58.884	ENSCAFG00000005969	TRMT6	97	58.884	Canis_familiaris
ENSDARG00000042344	trmt6	97	58.678	ENSCAFG00020000777	TRMT6	97	58.678	Canis_lupus_dingo
ENSDARG00000042344	trmt6	96	59.290	ENSCHIG00000010338	TRMT6	96	59.454	Capra_hircus
ENSDARG00000042344	trmt6	98	56.680	ENSTSYG00000004286	TRMT6	96	57.287	Carlito_syrichta
ENSDARG00000042344	trmt6	82	57.590	ENSCAPG00000015467	TRMT6	93	57.590	Cavia_aperea
ENSDARG00000042344	trmt6	97	57.557	ENSCPOG00000013809	TRMT6	97	57.557	Cavia_porcellus
ENSDARG00000042344	trmt6	97	57.495	ENSCCAG00000026939	TRMT6	97	58.111	Cebus_capucinus
ENSDARG00000042344	trmt6	97	57.906	ENSCATG00000041111	TRMT6	97	57.906	Cercocebus_atys
ENSDARG00000042344	trmt6	88	58.565	ENSCLAG00000013978	TRMT6	87	58.565	Chinchilla_lanigera
ENSDARG00000042344	trmt6	97	57.906	ENSCSAG00000013461	TRMT6	97	57.906	Chlorocebus_sabaeus
ENSDARG00000042344	trmt6	72	49.438	ENSCHOG00000012537	TRMT6	72	49.438	Choloepus_hoffmanni
ENSDARG00000042344	trmt6	95	58.105	ENSCPBG00000023406	TRMT6	98	58.105	Chrysemys_picta_bellii
ENSDARG00000042344	trmt6	91	36.758	ENSCING00000002472	-	95	35.461	Ciona_intestinalis
ENSDARG00000042344	trmt6	90	39.817	ENSCSAVG00000001680	-	95	39.151	Ciona_savignyi
ENSDARG00000042344	trmt6	97	57.700	ENSCANG00000002381	TRMT6	97	57.700	Colobus_angolensis_palliatus
ENSDARG00000042344	trmt6	95	58.787	ENSCGRG00001003385	Trmt6	96	58.787	Cricetulus_griseus_chok1gshd
ENSDARG00000042344	trmt6	95	58.787	ENSCGRG00000006540	Trmt6	96	58.787	Cricetulus_griseus_crigri
ENSDARG00000042344	trmt6	96	67.991	ENSCSEG00000002228	trmt6	98	67.320	Cynoglossus_semilaevis
ENSDARG00000042344	trmt6	98	64.606	ENSCVAG00000000341	trmt6	99	64.606	Cyprinodon_variegatus
ENSDARG00000042344	trmt6	88	60.417	ENSDNOG00000012785	TRMT6	86	60.417	Dasypus_novemcinctus
ENSDARG00000042344	trmt6	97	56.148	ENSDORG00000006458	Trmt6	97	55.123	Dipodomys_ordii
ENSDARG00000042344	trmt6	53	74.219	ENSETEG00000003490	-	50	72.727	Echinops_telfairi
ENSDARG00000042344	trmt6	59	35.461	ENSETEG00000017282	-	81	35.461	Echinops_telfairi
ENSDARG00000042344	trmt6	97	62.584	ENSEASG00005001411	TRMT6	96	62.584	Equus_asinus_asinus
ENSDARG00000042344	trmt6	97	58.592	ENSECAG00000023914	TRMT6	97	58.592	Equus_caballus
ENSDARG00000042344	trmt6	96	58.678	ENSEEUG00000006635	TRMT6	96	58.678	Erinaceus_europaeus
ENSDARG00000042344	trmt6	97	70.354	ENSELUG00000013378	trmt6	81	69.703	Esox_lucius
ENSDARG00000042344	trmt6	97	58.811	ENSFCAG00000003102	TRMT6	97	58.811	Felis_catus
ENSDARG00000042344	trmt6	90	57.906	ENSFALG00000013575	TRMT6	98	58.797	Ficedula_albicollis
ENSDARG00000042344	trmt6	97	56.448	ENSFDAG00000015117	TRMT6	95	56.448	Fukomys_damarensis
ENSDARG00000042344	trmt6	97	65.739	ENSFHEG00000019957	trmt6	99	65.739	Fundulus_heteroclitus
ENSDARG00000042344	trmt6	98	66.079	ENSGMOG00000011059	trmt6	100	66.079	Gadus_morhua
ENSDARG00000042344	trmt6	95	57.895	ENSGALG00000009169	TRMT6	98	57.773	Gallus_gallus
ENSDARG00000042344	trmt6	97	63.948	ENSGAFG00000008618	trmt6	98	63.948	Gambusia_affinis
ENSDARG00000042344	trmt6	100	68.817	ENSGACG00000012471	trmt6	100	68.817	Gasterosteus_aculeatus
ENSDARG00000042344	trmt6	95	57.474	ENSGAGG00000008464	TRMT6	98	58.737	Gopherus_agassizii
ENSDARG00000042344	trmt6	97	56.468	ENSGGOG00000008597	TRMT6	97	58.316	Gorilla_gorilla
ENSDARG00000042344	trmt6	97	66.309	ENSHBUG00000016631	trmt6	98	66.309	Haplochromis_burtoni
ENSDARG00000042344	trmt6	97	56.315	ENSHGLG00000015405	TRMT6	97	56.315	Heterocephalus_glaber_female
ENSDARG00000042344	trmt6	97	56.315	ENSHGLG00100004120	TRMT6	97	56.315	Heterocephalus_glaber_male
ENSDARG00000042344	trmt6	98	65.733	ENSHCOG00000000118	trmt6	97	65.733	Hippocampus_comes
ENSDARG00000042344	trmt6	96	77.384	ENSIPUG00000019365	trmt6	99	77.384	Ictalurus_punctatus
ENSDARG00000042344	trmt6	97	57.380	ENSSTOG00000006863	TRMT6	97	58.004	Ictidomys_tridecemlineatus
ENSDARG00000042344	trmt6	97	56.879	ENSJJAG00000007315	Trmt6	97	56.879	Jaculus_jaculus
ENSDARG00000042344	trmt6	97	67.312	ENSKMAG00000001295	trmt6	99	67.312	Kryptolebias_marmoratus
ENSDARG00000042344	trmt6	97	67.377	ENSLBEG00000025654	trmt6	99	67.377	Labrus_bergylta
ENSDARG00000042344	trmt6	95	60.470	ENSLACG00000016478	TRMT6	95	60.470	Latimeria_chalumnae
ENSDARG00000042344	trmt6	95	70.217	ENSLOCG00000016451	trmt6	97	70.217	Lepisosteus_oculatus
ENSDARG00000042344	trmt6	97	58.316	ENSLAFG00000032216	TRMT6	97	58.316	Loxodonta_africana
ENSDARG00000042344	trmt6	97	57.906	ENSMFAG00000044360	TRMT6	97	57.906	Macaca_fascicularis
ENSDARG00000042344	trmt6	97	57.906	ENSMMUG00000013728	TRMT6	97	57.906	Macaca_mulatta
ENSDARG00000042344	trmt6	97	57.906	ENSMNEG00000041831	TRMT6	97	57.906	Macaca_nemestrina
ENSDARG00000042344	trmt6	97	57.906	ENSMLEG00000040762	TRMT6	97	57.906	Mandrillus_leucophaeus
ENSDARG00000042344	trmt6	96	64.668	ENSMAMG00000012101	trmt6	99	67.026	Mastacembelus_armatus
ENSDARG00000042344	trmt6	97	66.309	ENSMZEG00005010771	trmt6	97	66.309	Maylandia_zebra
ENSDARG00000042344	trmt6	95	57.082	ENSMGAG00000007678	TRMT6	97	56.962	Meleagris_gallopavo
ENSDARG00000042344	trmt6	95	58.824	ENSMAUG00000008719	Trmt6	96	58.824	Mesocricetus_auratus
ENSDARG00000042344	trmt6	96	58.004	ENSMICG00000011626	TRMT6	96	58.004	Microcebus_murinus
ENSDARG00000042344	trmt6	95	58.475	ENSMOCG00000022320	Trmt6	95	58.475	Microtus_ochrogaster
ENSDARG00000042344	trmt6	98	67.692	ENSMMOG00000004412	trmt6	99	67.692	Mola_mola
ENSDARG00000042344	trmt6	99	56.212	ENSMODG00000003784	TRMT6	99	56.212	Monodelphis_domestica
ENSDARG00000042344	trmt6	98	63.420	ENSMALG00000018140	trmt6	98	63.420	Monopterus_albus
ENSDARG00000042344	trmt6	97	57.971	MGP_CAROLIEiJ_G0024344	Trmt6	97	57.971	Mus_caroli
ENSDARG00000042344	trmt6	97	58.299	ENSMUSG00000037376	Trmt6	97	58.299	Mus_musculus
ENSDARG00000042344	trmt6	97	58.299	MGP_PahariEiJ_G0025789	Trmt6	97	58.299	Mus_pahari
ENSDARG00000042344	trmt6	97	57.676	MGP_SPRETEiJ_G0025264	Trmt6	97	57.676	Mus_spretus
ENSDARG00000042344	trmt6	91	56.823	ENSMPUG00000006317	TRMT6	90	59.330	Mustela_putorius_furo
ENSDARG00000042344	trmt6	97	57.143	ENSMLUG00000006491	TRMT6	97	57.582	Myotis_lucifugus
ENSDARG00000042344	trmt6	98	56.504	ENSNGAG00000015251	Trmt6	96	56.504	Nannospalax_galili
ENSDARG00000042344	trmt6	97	64.602	ENSNBRG00000020261	trmt6	98	64.602	Neolamprologus_brichardi
ENSDARG00000042344	trmt6	97	56.263	ENSNLEG00000013957	TRMT6	97	58.111	Nomascus_leucogenys
ENSDARG00000042344	trmt6	85	58.095	ENSMEUG00000009179	TRMT6	99	58.095	Notamacropus_eugenii
ENSDARG00000042344	trmt6	96	55.925	ENSOPRG00000008564	TRMT6	97	57.741	Ochotona_princeps
ENSDARG00000042344	trmt6	97	56.936	ENSODEG00000005657	TRMT6	97	56.936	Octodon_degus
ENSDARG00000042344	trmt6	97	66.524	ENSONIG00000000968	trmt6	98	66.524	Oreochromis_niloticus
ENSDARG00000042344	trmt6	90	58.407	ENSOANG00000008403	-	99	58.407	Ornithorhynchus_anatinus
ENSDARG00000042344	trmt6	97	56.522	ENSOCUG00000014669	TRMT6	97	56.522	Oryctolagus_cuniculus
ENSDARG00000042344	trmt6	97	66.595	ENSORLG00000009862	trmt6	99	66.452	Oryzias_latipes
ENSDARG00000042344	trmt6	97	66.379	ENSORLG00020001466	trmt6	99	66.237	Oryzias_latipes_hni
ENSDARG00000042344	trmt6	97	64.407	ENSORLG00015015552	trmt6	99	66.953	Oryzias_latipes_hsok
ENSDARG00000042344	trmt6	95	65.784	ENSOMEG00000019874	trmt6	99	65.171	Oryzias_melastigma
ENSDARG00000042344	trmt6	97	58.799	ENSOGAG00000012950	TRMT6	96	58.799	Otolemur_garnettii
ENSDARG00000042344	trmt6	96	59.081	ENSOARG00000017993	TRMT6	96	59.244	Ovis_aries
ENSDARG00000042344	trmt6	97	57.172	ENSPPAG00000036809	TRMT6	97	57.787	Pan_paniscus
ENSDARG00000042344	trmt6	97	58.811	ENSPPRG00000000424	TRMT6	97	58.811	Panthera_pardus
ENSDARG00000042344	trmt6	97	58.811	ENSPTIG00000010629	TRMT6	97	58.811	Panthera_tigris_altaica
ENSDARG00000042344	trmt6	97	57.700	ENSPTRG00000013231	TRMT6	97	58.316	Pan_troglodytes
ENSDARG00000042344	trmt6	97	57.906	ENSPANG00000009284	TRMT6	97	57.906	Papio_anubis
ENSDARG00000042344	trmt6	94	69.752	ENSPKIG00000003441	trmt6	95	69.752	Paramormyrops_kingsleyae
ENSDARG00000042344	trmt6	95	58.439	ENSPSIG00000017048	TRMT6	97	58.439	Pelodiscus_sinensis
ENSDARG00000042344	trmt6	93	70.534	ENSPMGG00000021074	trmt6	95	70.998	Periophthalmus_magnuspinnatus
ENSDARG00000042344	trmt6	95	58.105	ENSPEMG00000023268	Trmt6	95	58.105	Peromyscus_maniculatus_bairdii
ENSDARG00000042344	trmt6	97	56.907	ENSPCIG00000001546	TRMT6	95	56.907	Phascolarctos_cinereus
ENSDARG00000042344	trmt6	97	64.421	ENSPFOG00000003037	trmt6	98	64.421	Poecilia_formosa
ENSDARG00000042344	trmt6	97	65.086	ENSPLAG00000005143	trmt6	98	65.086	Poecilia_latipinna
ENSDARG00000042344	trmt6	97	65.086	ENSPMEG00000014875	trmt6	98	65.086	Poecilia_mexicana
ENSDARG00000042344	trmt6	97	64.811	ENSPREG00000016227	trmt6	98	64.811	Poecilia_reticulata
ENSDARG00000042344	trmt6	97	58.316	ENSPPYG00000010691	TRMT6	97	58.316	Pongo_abelii
ENSDARG00000042344	trmt6	97	55.258	ENSPCAG00000012098	TRMT6	97	58.230	Procavia_capensis
ENSDARG00000042344	trmt6	97	58.385	ENSPCOG00000020723	TRMT6	97	58.385	Propithecus_coquereli
ENSDARG00000042344	trmt6	96	54.339	ENSPVAG00000007539	TRMT6	96	54.339	Pteropus_vampyrus
ENSDARG00000042344	trmt6	98	67.692	ENSPNYG00000000918	trmt6	99	67.692	Pundamilia_nyererei
ENSDARG00000042344	trmt6	100	73.640	ENSPNAG00000019279	trmt6	100	73.640	Pygocentrus_nattereri
ENSDARG00000042344	trmt6	97	57.500	ENSRNOG00000021270	Trmt6	97	57.500	Rattus_norvegicus
ENSDARG00000042344	trmt6	97	58.091	ENSRBIG00000031132	TRMT6	97	57.700	Rhinopithecus_bieti
ENSDARG00000042344	trmt6	97	57.906	ENSRROG00000045329	TRMT6	97	57.906	Rhinopithecus_roxellana
ENSDARG00000042344	trmt6	79	54.950	ENSSBOG00000019803	-	96	54.950	Saimiri_boliviensis_boliviensis
ENSDARG00000042344	trmt6	97	58.058	ENSSBOG00000033602	-	97	58.678	Saimiri_boliviensis_boliviensis
ENSDARG00000042344	trmt6	96	56.933	ENSSHAG00000010754	TRMT6	94	57.203	Sarcophilus_harrisii
ENSDARG00000042344	trmt6	97	69.851	ENSSFOG00015008429	trmt6	98	69.851	Scleropages_formosus
ENSDARG00000042344	trmt6	97	69.762	ENSSMAG00000005352	trmt6	98	69.762	Scophthalmus_maximus
ENSDARG00000042344	trmt6	97	68.737	ENSSDUG00000008294	trmt6	99	69.032	Seriola_dumerili
ENSDARG00000042344	trmt6	97	68.737	ENSSLDG00000002180	trmt6	99	69.032	Seriola_lalandi_dorsalis
ENSDARG00000042344	trmt6	88	54.965	ENSSARG00000005487	TRMT6	87	54.965	Sorex_araneus
ENSDARG00000042344	trmt6	97	70.815	ENSSPAG00000011628	trmt6	99	70.815	Stegastes_partitus
ENSDARG00000042344	trmt6	96	55.052	ENSSSCG00000007046	TRMT6	69	57.231	Sus_scrofa
ENSDARG00000042344	trmt6	96	57.384	ENSTGUG00000002195	TRMT6	98	58.861	Taeniopygia_guttata
ENSDARG00000042344	trmt6	96	64.206	ENSTRUG00000007153	trmt6	98	64.206	Takifugu_rubripes
ENSDARG00000042344	trmt6	96	65.605	ENSTNIG00000010726	TRMT6	98	65.605	Tetraodon_nigroviridis
ENSDARG00000042344	trmt6	61	62.025	ENSTBEG00000016317	TRMT6	58	62.025	Tupaia_belangeri
ENSDARG00000042344	trmt6	97	57.700	ENSTTRG00000012889	TRMT6	97	58.727	Tursiops_truncatus
ENSDARG00000042344	trmt6	97	57.764	ENSUAMG00000008674	TRMT6	97	57.764	Ursus_americanus
ENSDARG00000042344	trmt6	97	58.178	ENSUMAG00000004999	TRMT6	97	58.178	Ursus_maritimus
ENSDARG00000042344	trmt6	97	57.230	ENSVPAG00000002371	TRMT6	97	57.230	Vicugna_pacos
ENSDARG00000042344	trmt6	97	58.678	ENSVVUG00000023370	TRMT6	97	58.678	Vulpes_vulpes
ENSDARG00000042344	trmt6	99	58.740	ENSXETG00000004501	trmt6	100	58.740	Xenopus_tropicalis
ENSDARG00000042344	trmt6	96	63.087	ENSXCOG00000007761	trmt6	98	63.087	Xiphophorus_couchianus
ENSDARG00000042344	trmt6	97	65.591	ENSXMAG00000008592	trmt6	98	65.591	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	-	IEA	Process
GO:0031515	tRNA (m1A) methyltransferase complex	21873635.	IBA	Component
GO:0031515	tRNA (m1A) methyltransferase complex	-	IEA	Component