EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: ENSDARG00000042452 (Gene tree)
Gene ID: 387301
Gene Symbol: p2rx4b
Alias: p2rx4.2
Full Name: purinergic receptor P2X%2C ligand-gated ion channel%2C 4b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 12715 bases
Position: chr8:30743263-30755977
Accession: ZDB-GENE-030319-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000145823	LSM	PF01423.22	3.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000181234	-	3186	-	ENSDARP00000145823	127 (aa)	-	B0V1I0
ENSDART00000098975	-	1340	XM_021478206	ENSDARP00000089746	394 (aa)	XP_021333881	B0V1H9

Gene Model

Click here to download ENSDARG00000042452's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04020	Calcium signaling pathway	KEGG
dre04080	Neuroactive ligand-receptor interaction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000042452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000042452	p2rx4b	100	100.000	ENSDARG00000013800	snrpd3	100	100.000
ENSDARG00000042452	p2rx4b	100	95.312	ENSDARG00000076283	snrpd3l	100	95.312
ENSDARG00000042452	p2rx4b	65	31.325	ENSDARG00000011648	snrpd1	71	33.803
ENSDARG00000042452	p2rx4b	86	31.818	ENSDARG00000023852	lsm4	73	31.818

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001614	purinergic nucleotide receptor activity	21873635.	IBA	Function
GO:0001614	purinergic nucleotide receptor activity	-	IEA	Function
GO:0004931	extracellularly ATP-gated cation channel activity	21873635.	IBA	Function
GO:0004931	extracellularly ATP-gated cation channel activity	14580944.	IDA	Function
GO:0004931	extracellularly ATP-gated cation channel activity	-	IEA	Function
GO:0005216	ion channel activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005639	integral component of nuclear inner membrane	21873635.	IBA	Component
GO:0005887	integral component of plasma membrane	-	IEA	Component
GO:0006811	ion transport	-	IEA	Process
GO:0006812	cation transport	21873635.	IBA	Process
GO:0006812	cation transport	14580944.	IDA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	21873635.	IBA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0033198	response to ATP	-	IEA	Process
GO:0034220	ion transmembrane transport	21873635.	IBA	Process
GO:0035381	ATP-gated ion channel activity	21873635.	IBA	Function
GO:0098655	cation transmembrane transport	-	IEA	Process