EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000042724 (Gene tree)
Gene ID: 64275
Gene Symbol: supt5h
Alias: Spt5|etID10129.15|etID37101.15|fb37g01|fb95e05|fog|foggy|wu:fb37g01|wu:fb95e05|wu:fc10f02
Full Name: SPT5 homolog%2C DSIF elongation factor subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 31391 bases
Position: chr15:20363859-20395249
Accession: ZDB-GENE-001207-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000062675	KOW	PF00467.29	8.6e-30	1	1
ENSDARP00000132237	KOW	PF00467.29	2.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000166846	-	4024	-	ENSDARP00000132237	1052 (aa)	-	A0A0R4IBG8
ENSDART00000062676	-	3868	XM_005157529	ENSDARP00000062675	1084 (aa)	XP_005157586	F1QD27

Gene Model

Click here to download ENSDARG00000042724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000042724's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000042724	supt5h	99	87.293	ENSG00000196235	SUPT5H	97	95.556	Homo_sapiens
ENSDARG00000042724	supt5h	94	86.373	ENSAPOG00000012970	supt5h	96	86.471	Acanthochromis_polyacanthus
ENSDARG00000042724	supt5h	94	90.098	ENSAMEG00000008382	SUPT5H	94	90.098	Ailuropoda_melanoleuca
ENSDARG00000042724	supt5h	97	88.131	ENSACIG00000021245	supt5h	93	92.170	Amphilophus_citrinellus
ENSDARG00000042724	supt5h	94	90.402	ENSAOCG00000001136	supt5h	96	89.706	Amphiprion_ocellaris
ENSDARG00000042724	supt5h	94	85.784	ENSAPEG00000021060	supt5h	96	85.490	Amphiprion_percula
ENSDARG00000042724	supt5h	99	90.512	ENSATEG00000002626	supt5h	98	90.215	Anabas_testudineus
ENSDARG00000042724	supt5h	99	87.985	ENSACAG00000000375	SUPT5H	94	89.205	Anolis_carolinensis
ENSDARG00000042724	supt5h	94	89.902	ENSANAG00000033469	SUPT5H	94	89.706	Aotus_nancymaae
ENSDARG00000042724	supt5h	97	87.252	ENSACLG00000011374	supt5h	95	89.030	Astatotilapia_calliptera
ENSDARG00000042724	supt5h	100	95.856	ENSAMXG00000009128	supt5h	100	95.856	Astyanax_mexicanus
ENSDARG00000042724	supt5h	94	90.196	ENSBTAG00000010467	SUPT5H	94	90.000	Bos_taurus
ENSDARG00000042724	supt5h	91	39.027	WBGene00005015	spt-5	90	39.196	Caenorhabditis_elegans
ENSDARG00000042724	supt5h	94	89.804	ENSCJAG00000014182	SUPT5H	94	89.608	Callithrix_jacchus
ENSDARG00000042724	supt5h	94	90.098	ENSCAFG00000005469	SUPT5H	94	89.902	Canis_familiaris
ENSDARG00000042724	supt5h	94	87.635	ENSCAFG00020015732	SUPT5H	98	88.342	Canis_lupus_dingo
ENSDARG00000042724	supt5h	94	90.098	ENSCHIG00000023821	SUPT5H	95	89.706	Capra_hircus
ENSDARG00000042724	supt5h	94	89.205	ENSTSYG00000010636	SUPT5H	94	89.107	Carlito_syrichta
ENSDARG00000042724	supt5h	94	87.255	ENSCAPG00000008285	SUPT5H	96	87.144	Cavia_aperea
ENSDARG00000042724	supt5h	94	89.510	ENSCPOG00000011367	SUPT5H	94	89.510	Cavia_porcellus
ENSDARG00000042724	supt5h	94	89.902	ENSCCAG00000034052	SUPT5H	94	89.706	Cebus_capucinus
ENSDARG00000042724	supt5h	99	87.593	ENSCATG00000035589	SUPT5H	95	89.608	Cercocebus_atys
ENSDARG00000042724	supt5h	94	89.510	ENSCLAG00000013796	SUPT5H	94	89.510	Chinchilla_lanigera
ENSDARG00000042724	supt5h	94	90.098	ENSCSAG00000003826	SUPT5H	94	89.902	Chlorocebus_sabaeus
ENSDARG00000042724	supt5h	94	89.401	ENSCPBG00000018792	SUPT5H	100	89.556	Chrysemys_picta_bellii
ENSDARG00000042724	supt5h	96	59.112	ENSCING00000021624	-	93	60.830	Ciona_intestinalis
ENSDARG00000042724	supt5h	99	60.179	ENSCSAVG00000000030	-	99	59.318	Ciona_savignyi
ENSDARG00000042724	supt5h	94	90.098	ENSCANG00000043752	SUPT5H	95	89.608	Colobus_angolensis_palliatus
ENSDARG00000042724	supt5h	94	89.118	ENSCGRG00001012522	Supt5	94	88.922	Cricetulus_griseus_chok1gshd
ENSDARG00000042724	supt5h	94	89.216	ENSCGRG00000006779	Supt5	93	89.020	Cricetulus_griseus_crigri
ENSDARG00000042724	supt5h	73	69.819	ENSCSEG00000017151	-	94	69.520	Cynoglossus_semilaevis
ENSDARG00000042724	supt5h	95	83.734	ENSCSEG00000015699	supt5h	97	85.742	Cynoglossus_semilaevis
ENSDARG00000042724	supt5h	94	91.373	ENSCVAG00000007501	supt5h	94	91.373	Cyprinodon_variegatus
ENSDARG00000042724	supt5h	90	89.735	ENSDNOG00000033920	SUPT5H	94	89.115	Dasypus_novemcinctus
ENSDARG00000042724	supt5h	94	83.121	ENSDORG00000016582	Supt5	94	83.710	Dipodomys_ordii
ENSDARG00000042724	supt5h	94	53.682	FBgn0040273	Spt5	90	54.211	Drosophila_melanogaster
ENSDARG00000042724	supt5h	52	95.455	ENSETEG00000009497	-	50	95.455	Echinops_telfairi
ENSDARG00000042724	supt5h	89	75.000	ENSEBUG00000011892	supt5h	100	74.923	Eptatretus_burgeri
ENSDARG00000042724	supt5h	94	89.020	ENSEASG00005011861	SUPT5H	99	89.091	Equus_asinus_asinus
ENSDARG00000042724	supt5h	94	89.118	ENSECAG00000013309	SUPT5H	99	90.244	Equus_caballus
ENSDARG00000042724	supt5h	97	80.342	ENSEEUG00000012879	SUPT5H	99	79.886	Erinaceus_europaeus
ENSDARG00000042724	supt5h	99	93.513	ENSELUG00000011402	supt5h	98	92.458	Esox_lucius
ENSDARG00000042724	supt5h	94	90.098	ENSFCAG00000010744	SUPT5H	94	89.902	Felis_catus
ENSDARG00000042724	supt5h	94	89.510	ENSFDAG00000015803	SUPT5H	94	89.510	Fukomys_damarensis
ENSDARG00000042724	supt5h	94	89.216	ENSFHEG00000012497	supt5h	95	88.922	Fundulus_heteroclitus
ENSDARG00000042724	supt5h	99	77.656	ENSGMOG00000003422	supt5h	94	79.065	Gadus_morhua
ENSDARG00000042724	supt5h	99	82.979	ENSGACG00000004934	supt5h	95	85.881	Gasterosteus_aculeatus
ENSDARG00000042724	supt5h	91	88.618	ENSGAGG00000019112	SUPT5H	99	89.655	Gopherus_agassizii
ENSDARG00000042724	supt5h	94	90.098	ENSGGOG00000014425	SUPT5H	94	89.618	Gorilla_gorilla
ENSDARG00000042724	supt5h	99	90.242	ENSHBUG00000017144	supt5h	94	92.360	Haplochromis_burtoni
ENSDARG00000042724	supt5h	94	89.314	ENSHGLG00000018339	SUPT5H	94	89.314	Heterocephalus_glaber_female
ENSDARG00000042724	supt5h	94	88.725	ENSHGLG00100017126	SUPT5H	94	88.725	Heterocephalus_glaber_male
ENSDARG00000042724	supt5h	99	88.868	ENSHCOG00000004932	supt5h	94	90.490	Hippocampus_comes
ENSDARG00000042724	supt5h	99	94.424	ENSIPUG00000007308	supt5h	97	94.972	Ictalurus_punctatus
ENSDARG00000042724	supt5h	94	89.020	ENSSTOG00000026638	SUPT5H	94	88.824	Ictidomys_tridecemlineatus
ENSDARG00000042724	supt5h	94	89.118	ENSJJAG00000022374	Supt5	94	88.824	Jaculus_jaculus
ENSDARG00000042724	supt5h	94	88.207	ENSKMAG00000004401	supt5h	94	88.304	Kryptolebias_marmoratus
ENSDARG00000042724	supt5h	94	89.422	ENSLACG00000008663	SUPT5H	94	89.422	Latimeria_chalumnae
ENSDARG00000042724	supt5h	85	80.215	ENSLOCG00000014703	SUPT5H	93	78.869	Lepisosteus_oculatus
ENSDARG00000042724	supt5h	99	82.396	ENSLAFG00000027736	SUPT5H	94	86.386	Loxodonta_africana
ENSDARG00000042724	supt5h	94	90.098	ENSMFAG00000038707	SUPT5H	94	89.902	Macaca_fascicularis
ENSDARG00000042724	supt5h	94	90.098	ENSMMUG00000019372	SUPT5H	94	89.902	Macaca_mulatta
ENSDARG00000042724	supt5h	94	90.098	ENSMNEG00000041553	SUPT5H	94	89.902	Macaca_nemestrina
ENSDARG00000042724	supt5h	94	90.098	ENSMLEG00000036432	SUPT5H	96	89.608	Mandrillus_leucophaeus
ENSDARG00000042724	supt5h	94	92.270	ENSMAMG00000019715	supt5h	94	92.661	Mastacembelus_armatus
ENSDARG00000042724	supt5h	99	90.074	ENSMZEG00005024864	supt5h	94	92.180	Maylandia_zebra
ENSDARG00000042724	supt5h	94	89.401	ENSMGAG00000012449	SUPT5H	94	89.205	Meleagris_gallopavo
ENSDARG00000042724	supt5h	94	82.698	ENSMAUG00000009006	Supt5	94	84.510	Mesocricetus_auratus
ENSDARG00000042724	supt5h	99	87.151	ENSMICG00000006115	SUPT5H	94	89.608	Microcebus_murinus
ENSDARG00000042724	supt5h	94	89.216	ENSMOCG00000012211	Supt5	94	89.020	Microtus_ochrogaster
ENSDARG00000042724	supt5h	94	90.490	ENSMMOG00000009770	supt5h	97	90.196	Mola_mola
ENSDARG00000042724	supt5h	94	83.220	ENSMODG00000013570	SUPT5H	99	82.877	Monodelphis_domestica
ENSDARG00000042724	supt5h	99	90.608	ENSMALG00000017833	supt5h	96	91.087	Monopterus_albus
ENSDARG00000042724	supt5h	99	86.334	MGP_CAROLIEiJ_G0029441	Supt5	94	88.627	Mus_caroli
ENSDARG00000042724	supt5h	99	87.085	ENSMUSG00000003435	Supt5	94	88.627	Mus_musculus
ENSDARG00000042724	supt5h	99	86.150	MGP_PahariEiJ_G0012677	Supt5	94	88.529	Mus_pahari
ENSDARG00000042724	supt5h	99	86.334	MGP_SPRETEiJ_G0030539	Supt5	94	88.627	Mus_spretus
ENSDARG00000042724	supt5h	94	90.098	ENSMPUG00000017721	SUPT5H	94	89.902	Mustela_putorius_furo
ENSDARG00000042724	supt5h	94	89.422	ENSMLUG00000013886	-	94	89.226	Myotis_lucifugus
ENSDARG00000042724	supt5h	94	86.024	ENSMLUG00000008079	-	94	85.827	Myotis_lucifugus
ENSDARG00000042724	supt5h	99	86.506	ENSNGAG00000022458	Supt5	94	88.813	Nannospalax_galili
ENSDARG00000042724	supt5h	83	85.059	ENSNBRG00000005030	supt5h	71	85.242	Neolamprologus_brichardi
ENSDARG00000042724	supt5h	94	87.097	ENSNLEG00000014365	SUPT5H	96	86.901	Nomascus_leucogenys
ENSDARG00000042724	supt5h	92	83.533	ENSMEUG00000016423	SUPT5H	98	83.114	Notamacropus_eugenii
ENSDARG00000042724	supt5h	97	82.745	ENSOPRG00000016844	SUPT5H	94	84.787	Ochotona_princeps
ENSDARG00000042724	supt5h	94	89.510	ENSODEG00000016445	SUPT5H	94	89.510	Octodon_degus
ENSDARG00000042724	supt5h	99	90.353	ENSONIG00000001100	supt5h	94	92.458	Oreochromis_niloticus
ENSDARG00000042724	supt5h	78	89.429	ENSOANG00000008175	SUPT5H	96	89.512	Ornithorhynchus_anatinus
ENSDARG00000042724	supt5h	94	89.696	ENSOCUG00000002155	SUPT5H	94	89.401	Oryctolagus_cuniculus
ENSDARG00000042724	supt5h	99	89.209	ENSORLG00000000394	supt5h	94	91.078	Oryzias_latipes
ENSDARG00000042724	supt5h	99	89.302	ENSORLG00020021680	supt5h	94	91.176	Oryzias_latipes_hni
ENSDARG00000042724	supt5h	99	89.395	ENSORLG00015010686	supt5h	94	91.176	Oryzias_latipes_hsok
ENSDARG00000042724	supt5h	94	89.902	ENSOGAG00000033979	SUPT5H	94	89.706	Otolemur_garnettii
ENSDARG00000042724	supt5h	94	88.824	ENSOARG00000006174	SUPT5H	94	88.627	Ovis_aries
ENSDARG00000042724	supt5h	94	90.098	ENSPPAG00000040180	SUPT5H	94	89.902	Pan_paniscus
ENSDARG00000042724	supt5h	94	90.000	ENSPPRG00000009686	SUPT5H	94	89.804	Panthera_pardus
ENSDARG00000042724	supt5h	94	90.098	ENSPTIG00000011633	SUPT5H	94	89.902	Panthera_tigris_altaica
ENSDARG00000042724	supt5h	94	90.098	ENSPTRG00000010971	SUPT5H	94	89.902	Pan_troglodytes
ENSDARG00000042724	supt5h	94	90.098	ENSPANG00000007383	SUPT5H	94	89.902	Papio_anubis
ENSDARG00000042724	supt5h	99	93.494	ENSPKIG00000006261	supt5h	97	93.939	Paramormyrops_kingsleyae
ENSDARG00000042724	supt5h	94	86.796	ENSPSIG00000014117	SUPT5H	94	86.699	Pelodiscus_sinensis
ENSDARG00000042724	supt5h	90	87.870	ENSPMGG00000020581	supt5h	96	88.175	Periophthalmus_magnuspinnatus
ENSDARG00000042724	supt5h	99	86.427	ENSPEMG00000015730	Supt5	94	88.824	Peromyscus_maniculatus_bairdii
ENSDARG00000042724	supt5h	100	77.402	ENSPMAG00000006913	supt5h	97	77.830	Petromyzon_marinus
ENSDARG00000042724	supt5h	94	89.303	ENSPCIG00000010477	SUPT5H	93	89.009	Phascolarctos_cinereus
ENSDARG00000042724	supt5h	95	88.589	ENSPFOG00000011126	supt5h	94	90.506	Poecilia_formosa
ENSDARG00000042724	supt5h	99	89.395	ENSPLAG00000013092	supt5h	94	91.765	Poecilia_latipinna
ENSDARG00000042724	supt5h	95	89.790	ENSPMEG00000020479	supt5h	92	91.843	Poecilia_mexicana
ENSDARG00000042724	supt5h	99	87.721	ENSPREG00000006712	supt5h	94	89.489	Poecilia_reticulata
ENSDARG00000042724	supt5h	94	89.020	ENSPPYG00000009968	SUPT5H	94	88.824	Pongo_abelii
ENSDARG00000042724	supt5h	94	71.569	ENSPCAG00000010830	SUPT5H	93	72.941	Procavia_capensis
ENSDARG00000042724	supt5h	94	89.902	ENSPCOG00000021231	SUPT5H	94	89.706	Propithecus_coquereli
ENSDARG00000042724	supt5h	70	95.455	ENSPVAG00000011129	SUPT5H	68	95.455	Pteropus_vampyrus
ENSDARG00000042724	supt5h	97	87.051	ENSPNYG00000009203	supt5h	95	88.824	Pundamilia_nyererei
ENSDARG00000042724	supt5h	96	87.441	ENSPNAG00000010925	supt5h	100	87.441	Pygocentrus_nattereri
ENSDARG00000042724	supt5h	99	83.487	ENSRNOG00000032034	Supt5h	99	84.762	Rattus_norvegicus
ENSDARG00000042724	supt5h	99	86.567	ENSRBIG00000039828	SUPT5H	94	88.235	Rhinopithecus_bieti
ENSDARG00000042724	supt5h	94	90.098	ENSRROG00000019625	SUPT5H	94	89.902	Rhinopithecus_roxellana
ENSDARG00000042724	supt5h	94	89.902	ENSSBOG00000022657	SUPT5H	95	89.412	Saimiri_boliviensis_boliviensis
ENSDARG00000042724	supt5h	91	84.476	ENSSHAG00000009504	SUPT5H	99	84.375	Sarcophilus_harrisii
ENSDARG00000042724	supt5h	99	93.959	ENSSFOG00015005973	supt5h	97	94.223	Scleropages_formosus
ENSDARG00000042724	supt5h	94	89.782	ENSSMAG00000004503	supt5h	92	92.364	Scophthalmus_maximus
ENSDARG00000042724	supt5h	99	90.884	ENSSDUG00000014520	supt5h	94	92.948	Seriola_dumerili
ENSDARG00000042724	supt5h	99	91.442	ENSSLDG00000008112	supt5h	94	93.536	Seriola_lalandi_dorsalis
ENSDARG00000042724	supt5h	53	94.891	ENSSARG00000000997	-	57	94.891	Sorex_araneus
ENSDARG00000042724	supt5h	90	85.977	ENSSPUG00000011434	SUPT5H	95	85.670	Sphenodon_punctatus
ENSDARG00000042724	supt5h	94	92.654	ENSSPAG00000010429	supt5h	94	92.752	Stegastes_partitus
ENSDARG00000042724	supt5h	94	87.488	ENSSSCG00000023556	SUPT5H	94	87.292	Sus_scrofa
ENSDARG00000042724	supt5h	99	88.816	ENSTRUG00000002370	supt5h	94	90.481	Takifugu_rubripes
ENSDARG00000042724	supt5h	94	91.398	ENSTNIG00000011178	supt5h	94	91.577	Tetraodon_nigroviridis
ENSDARG00000042724	supt5h	64	79.025	ENSTBEG00000017617	SUPT5H	94	79.025	Tupaia_belangeri
ENSDARG00000042724	supt5h	94	89.020	ENSTTRG00000003573	SUPT5H	94	88.824	Tursiops_truncatus
ENSDARG00000042724	supt5h	94	90.196	ENSUAMG00000020014	SUPT5H	94	90.000	Ursus_americanus
ENSDARG00000042724	supt5h	94	90.196	ENSUMAG00000019558	SUPT5H	97	90.000	Ursus_maritimus
ENSDARG00000042724	supt5h	90	89.898	ENSVVUG00000006193	SUPT5H	93	89.694	Vulpes_vulpes
ENSDARG00000042724	supt5h	99	87.731	ENSXETG00000002888	supt5h	94	89.510	Xenopus_tropicalis
ENSDARG00000042724	supt5h	99	87.558	ENSXMAG00000004169	supt5h	94	89.118	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001764	neuron migration	16193504.	IMP	Process
GO:0003677	DNA binding	19742326.	IDA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	18978947.	IDA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0006357	regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0006357	regulation of transcription by RNA polymerase II	19742326.	IGI	Process
GO:0006357	regulation of transcription by RNA polymerase II	19742326.27520065.	IMP	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	18978947.	IMP	Process
GO:0021954	central nervous system neuron development	10191060.	IMP	Process
GO:0030097	hemopoiesis	21205096.	IMP	Process
GO:0032044	DSIF complex	21873635.	IBA	Component
GO:0032044	DSIF complex	-	ISS	Component
GO:0032784	regulation of DNA-templated transcription, elongation	-	IEA	Process
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter	18978947.	IMP	Process
GO:0034244	negative regulation of transcription elongation from RNA polymerase II promoter	18978947.	IMP	Process
GO:0040037	negative regulation of fibroblast growth factor receptor signaling pathway	27520065.	IMP	Process
GO:0046427	positive regulation of JAK-STAT cascade	27520065.	IMP	Process
GO:0060335	positive regulation of interferon-gamma-mediated signaling pathway	27520065.	IMP	Process
GO:1901534	positive regulation of hematopoietic progenitor cell differentiation	27520065.	IMP	Process
GO:1902038	positive regulation of hematopoietic stem cell differentiation	27520065.	IMP	Process