EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000042751 (Gene tree)
Gene ID: 445220
Gene Symbol: riok3
Alias: fb10c11|wu:fb10c11|zgc:100972
Full Name: RIO kinase 3 (yeast)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 13601 bases
Position: chr24:36239617-36253217
Accession: ZDB-GENE-040801-133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000062744	RIO1	PF01163.22	1.6e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000062745	-	1821	-	ENSDARP00000062744	507 (aa)	-	F1QCP9

Gene Model

Click here to download ENSDARG00000042751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000042751's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000042751	riok3	56	44.251	ENSDARG00000016399	riok1	62	38.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000042751	riok3	97	73.465	ENSG00000101782	RIOK3	96	73.465	Homo_sapiens
ENSDARG00000042751	riok3	100	77.843	ENSAPOG00000020861	riok3	99	77.843	Acanthochromis_polyacanthus
ENSDARG00000042751	riok3	98	72.835	ENSAMEG00000013754	RIOK3	82	72.835	Ailuropoda_melanoleuca
ENSDARG00000042751	riok3	100	78.782	ENSACIG00000019894	riok3	99	78.782	Amphilophus_citrinellus
ENSDARG00000042751	riok3	100	79.020	ENSAOCG00000007172	riok3	99	79.020	Amphiprion_ocellaris
ENSDARG00000042751	riok3	100	79.412	ENSAPEG00000002536	riok3	99	79.412	Amphiprion_percula
ENSDARG00000042751	riok3	99	80.517	ENSATEG00000018303	riok3	99	80.517	Anabas_testudineus
ENSDARG00000042751	riok3	96	76.113	ENSAPLG00000006497	RIOK3	95	76.113	Anas_platyrhynchos
ENSDARG00000042751	riok3	97	75.600	ENSACAG00000000159	RIOK3	95	75.600	Anolis_carolinensis
ENSDARG00000042751	riok3	96	56.592	ENSANAG00000030146	RIOK3	93	56.592	Aotus_nancymaae
ENSDARG00000042751	riok3	97	80.122	ENSACLG00000018966	riok3	99	80.122	Astatotilapia_calliptera
ENSDARG00000042751	riok3	97	83.030	ENSAMXG00000015617	riok3	100	82.087	Astyanax_mexicanus
ENSDARG00000042751	riok3	97	73.611	ENSBTAG00000010042	RIOK3	96	73.611	Bos_taurus
ENSDARG00000042751	riok3	92	35.992	WBGene00014012	riok-3	91	35.992	Caenorhabditis_elegans
ENSDARG00000042751	riok3	97	73.956	ENSCJAG00000020556	RIOK3	95	73.956	Callithrix_jacchus
ENSDARG00000042751	riok3	97	73.852	ENSCAFG00000018201	RIOK3	96	73.852	Canis_familiaris
ENSDARG00000042751	riok3	97	73.852	ENSCAFG00020014801	RIOK3	99	76.513	Canis_lupus_dingo
ENSDARG00000042751	riok3	99	71.565	ENSCHIG00000009312	RIOK3	98	73.705	Capra_hircus
ENSDARG00000042751	riok3	97	74.155	ENSTSYG00000000142	RIOK3	96	75.286	Carlito_syrichta
ENSDARG00000042751	riok3	91	75.269	ENSCAPG00000005756	RIOK3	95	75.269	Cavia_aperea
ENSDARG00000042751	riok3	97	73.653	ENSCPOG00000007991	RIOK3	96	73.653	Cavia_porcellus
ENSDARG00000042751	riok3	97	73.956	ENSCCAG00000028338	RIOK3	96	75.229	Cebus_capucinus
ENSDARG00000042751	riok3	97	73.069	ENSCATG00000040824	RIOK3	96	75.058	Cercocebus_atys
ENSDARG00000042751	riok3	97	73.373	ENSCLAG00000006767	RIOK3	96	73.373	Chinchilla_lanigera
ENSDARG00000042751	riok3	97	73.267	ENSCSAG00000017680	RIOK3	96	73.267	Chlorocebus_sabaeus
ENSDARG00000042751	riok3	85	73.462	ENSCHOG00000008343	RIOK3	83	73.462	Choloepus_hoffmanni
ENSDARG00000042751	riok3	97	77.016	ENSCPBG00000027226	RIOK3	96	77.016	Chrysemys_picta_bellii
ENSDARG00000042751	riok3	94	48.527	ENSCSAVG00000003068	-	99	50.920	Ciona_savignyi
ENSDARG00000042751	riok3	93	61.364	ENSCANG00000035939	RIOK3	91	74.510	Colobus_angolensis_palliatus
ENSDARG00000042751	riok3	99	71.180	ENSCGRG00001013249	Riok3	99	71.291	Cricetulus_griseus_chok1gshd
ENSDARG00000042751	riok3	99	70.986	ENSCGRG00000017636	Riok3	99	71.098	Cricetulus_griseus_crigri
ENSDARG00000042751	riok3	99	76.096	ENSCSEG00000018289	riok3	99	77.053	Cynoglossus_semilaevis
ENSDARG00000042751	riok3	99	76.892	ENSCVAG00000011848	riok3	99	76.892	Cyprinodon_variegatus
ENSDARG00000042751	riok3	97	74.059	ENSDNOG00000039433	RIOK3	96	74.059	Dasypus_novemcinctus
ENSDARG00000042751	riok3	97	73.267	ENSDORG00000011663	Riok3	96	73.267	Dipodomys_ordii
ENSDARG00000042751	riok3	92	41.541	FBgn0031643	CG3008	86	41.808	Drosophila_melanogaster
ENSDARG00000042751	riok3	91	74.630	ENSETEG00000003689	RIOK3	96	74.630	Echinops_telfairi
ENSDARG00000042751	riok3	95	52.371	ENSEBUG00000000555	riok3	95	52.371	Eptatretus_burgeri
ENSDARG00000042751	riok3	96	73.293	ENSEASG00005002317	RIOK3	97	73.293	Equus_asinus_asinus
ENSDARG00000042751	riok3	96	72.709	ENSECAG00000009028	RIOK3	97	72.709	Equus_caballus
ENSDARG00000042751	riok3	97	59.438	ENSEEUG00000007005	RIOK3	99	59.438	Erinaceus_europaeus
ENSDARG00000042751	riok3	100	79.216	ENSELUG00000017655	riok3	100	79.216	Esox_lucius
ENSDARG00000042751	riok3	97	73.663	ENSFCAG00000000517	RIOK3	96	73.663	Felis_catus
ENSDARG00000042751	riok3	97	76.048	ENSFALG00000006145	RIOK3	96	76.048	Ficedula_albicollis
ENSDARG00000042751	riok3	98	73.425	ENSFDAG00000001548	RIOK3	96	73.425	Fukomys_damarensis
ENSDARG00000042751	riok3	100	76.424	ENSFHEG00000011350	riok3	99	76.424	Fundulus_heteroclitus
ENSDARG00000042751	riok3	90	78.384	ENSGMOG00000005157	riok3	99	78.384	Gadus_morhua
ENSDARG00000042751	riok3	97	75.301	ENSGALG00000015004	RIOK3	96	75.301	Gallus_gallus
ENSDARG00000042751	riok3	96	65.306	ENSGAFG00000002403	riok3	93	65.306	Gambusia_affinis
ENSDARG00000042751	riok3	99	77.344	ENSGACG00000000880	riok3	100	77.344	Gasterosteus_aculeatus
ENSDARG00000042751	riok3	97	75.600	ENSGAGG00000024785	RIOK3	96	75.600	Gopherus_agassizii
ENSDARG00000042751	riok3	56	74.394	ENSGGOG00000036734	-	93	74.394	Gorilla_gorilla
ENSDARG00000042751	riok3	100	78.389	ENSHBUG00000003233	riok3	99	78.389	Haplochromis_burtoni
ENSDARG00000042751	riok3	97	72.510	ENSHGLG00000003885	RIOK3	96	72.510	Heterocephalus_glaber_female
ENSDARG00000042751	riok3	97	72.510	ENSHGLG00100002077	RIOK3	96	72.510	Heterocephalus_glaber_male
ENSDARG00000042751	riok3	97	78.068	ENSHCOG00000006794	riok3	96	78.068	Hippocampus_comes
ENSDARG00000042751	riok3	99	82.643	ENSIPUG00000001406	Riok3	100	82.643	Ictalurus_punctatus
ENSDARG00000042751	riok3	99	71.756	ENSSTOG00000006517	RIOK3	99	71.756	Ictidomys_tridecemlineatus
ENSDARG00000042751	riok3	98	73.214	ENSJJAG00000023689	Riok3	95	73.214	Jaculus_jaculus
ENSDARG00000042751	riok3	100	76.378	ENSKMAG00000007259	riok3	99	76.378	Kryptolebias_marmoratus
ENSDARG00000042751	riok3	100	77.451	ENSLBEG00000013689	riok3	99	77.451	Labrus_bergylta
ENSDARG00000042751	riok3	99	71.930	ENSLACG00000017326	RIOK3	99	71.930	Latimeria_chalumnae
ENSDARG00000042751	riok3	99	78.641	ENSLOCG00000001652	riok3	100	78.641	Lepisosteus_oculatus
ENSDARG00000042751	riok3	96	74.354	ENSLAFG00000001380	RIOK3	95	74.354	Loxodonta_africana
ENSDARG00000042751	riok3	97	73.465	ENSMMUG00000021478	RIOK3	96	75.058	Macaca_mulatta
ENSDARG00000042751	riok3	97	63.366	ENSMNEG00000041106	RIOK3	95	63.366	Macaca_nemestrina
ENSDARG00000042751	riok3	97	73.465	ENSMLEG00000028187	RIOK3	96	75.058	Mandrillus_leucophaeus
ENSDARG00000042751	riok3	100	78.235	ENSMAMG00000008502	riok3	99	78.235	Mastacembelus_armatus
ENSDARG00000042751	riok3	100	78.585	ENSMZEG00005020212	riok3	99	78.585	Maylandia_zebra
ENSDARG00000042751	riok3	97	75.403	ENSMGAG00000010079	RIOK3	95	75.403	Meleagris_gallopavo
ENSDARG00000042751	riok3	99	71.456	ENSMAUG00000020527	Riok3	99	71.456	Mesocricetus_auratus
ENSDARG00000042751	riok3	98	73.031	ENSMICG00000009293	RIOK3	96	73.031	Microcebus_murinus
ENSDARG00000042751	riok3	99	70.881	ENSMOCG00000012114	Riok3	96	70.881	Microtus_ochrogaster
ENSDARG00000042751	riok3	96	76.074	ENSMMOG00000019204	riok3	99	76.074	Mola_mola
ENSDARG00000042751	riok3	99	73.694	ENSMODG00000021496	RIOK3	99	73.694	Monodelphis_domestica
ENSDARG00000042751	riok3	99	78.474	ENSMALG00000020848	riok3	100	78.474	Monopterus_albus
ENSDARG00000042751	riok3	99	71.727	MGP_CAROLIEiJ_G0022001	Riok3	100	71.727	Mus_caroli
ENSDARG00000042751	riok3	99	71.157	ENSMUSG00000024404	Riok3	95	87.931	Mus_musculus
ENSDARG00000042751	riok3	99	71.537	MGP_PahariEiJ_G0018739	Riok3	100	71.537	Mus_pahari
ENSDARG00000042751	riok3	97	74.052	ENSMPUG00000005772	RIOK3	96	74.052	Mustela_putorius_furo
ENSDARG00000042751	riok3	98	72.031	ENSMLUG00000007081	RIOK3	99	72.031	Myotis_lucifugus
ENSDARG00000042751	riok3	98	73.228	ENSNGAG00000011446	Riok3	96	73.228	Nannospalax_galili
ENSDARG00000042751	riok3	79	78.469	ENSNBRG00000016677	riok3	85	78.469	Neolamprologus_brichardi
ENSDARG00000042751	riok3	97	73.465	ENSNLEG00000006758	RIOK3	96	74.260	Nomascus_leucogenys
ENSDARG00000042751	riok3	99	72.921	ENSMEUG00000006292	RIOK3	99	72.921	Notamacropus_eugenii
ENSDARG00000042751	riok3	98	72.056	ENSOPRG00000004803	RIOK3	96	72.619	Ochotona_princeps
ENSDARG00000042751	riok3	98	72.047	ENSODEG00000006444	RIOK3	96	72.047	Octodon_degus
ENSDARG00000042751	riok3	97	78.313	ENSONIG00000013422	riok3	100	78.313	Oreochromis_niloticus
ENSDARG00000042751	riok3	95	73.878	ENSOANG00000012074	RIOK3	99	73.878	Ornithorhynchus_anatinus
ENSDARG00000042751	riok3	97	73.123	ENSOCUG00000016820	RIOK3	96	73.123	Oryctolagus_cuniculus
ENSDARG00000042751	riok3	100	77.515	ENSORLG00000003395	riok3	99	77.515	Oryzias_latipes
ENSDARG00000042751	riok3	100	77.515	ENSORLG00020000672	riok3	99	77.515	Oryzias_latipes_hni
ENSDARG00000042751	riok3	100	77.515	ENSORLG00015007372	riok3	99	77.515	Oryzias_latipes_hsok
ENSDARG00000042751	riok3	100	77.120	ENSOMEG00000001380	riok3	99	77.120	Oryzias_melastigma
ENSDARG00000042751	riok3	98	73.819	ENSOGAG00000014502	RIOK3	87	73.819	Otolemur_garnettii
ENSDARG00000042751	riok3	99	71.756	ENSOARG00000008042	RIOK3	99	71.756	Ovis_aries
ENSDARG00000042751	riok3	97	73.663	ENSPPAG00000030258	RIOK3	98	73.933	Pan_paniscus
ENSDARG00000042751	riok3	97	73.663	ENSPPRG00000023302	RIOK3	96	73.663	Panthera_pardus
ENSDARG00000042751	riok3	97	73.663	ENSPTIG00000000960	RIOK3	96	73.663	Panthera_tigris_altaica
ENSDARG00000042751	riok3	97	73.465	ENSPTRG00000009918	RIOK3	98	73.708	Pan_troglodytes
ENSDARG00000042751	riok3	97	73.465	ENSPANG00000011485	RIOK3	96	75.058	Papio_anubis
ENSDARG00000042751	riok3	100	80.473	ENSPKIG00000018297	riok3	100	80.473	Paramormyrops_kingsleyae
ENSDARG00000042751	riok3	96	74.850	ENSPSIG00000006250	RIOK3	96	74.850	Pelodiscus_sinensis
ENSDARG00000042751	riok3	94	76.875	ENSPMGG00000009414	riok3	100	76.875	Periophthalmus_magnuspinnatus
ENSDARG00000042751	riok3	99	71.157	ENSPEMG00000023794	Riok3	100	71.157	Peromyscus_maniculatus_bairdii
ENSDARG00000042751	riok3	84	70.588	ENSPMAG00000003258	riok3	97	70.588	Petromyzon_marinus
ENSDARG00000042751	riok3	93	75.314	ENSPCIG00000013991	RIOK3	99	75.314	Phascolarctos_cinereus
ENSDARG00000042751	riok3	97	78.702	ENSPFOG00000024127	riok3	99	77.210	Poecilia_formosa
ENSDARG00000042751	riok3	97	77.890	ENSPLAG00000004956	riok3	99	76.424	Poecilia_latipinna
ENSDARG00000042751	riok3	97	77.890	ENSPMEG00000020108	riok3	99	76.424	Poecilia_mexicana
ENSDARG00000042751	riok3	99	76.575	ENSPREG00000010010	riok3	100	76.575	Poecilia_reticulata
ENSDARG00000042751	riok3	97	68.651	ENSPPYG00000009062	RIOK3	95	68.651	Pongo_abelii
ENSDARG00000042751	riok3	77	71.062	ENSPCAG00000001021	RIOK3	76	71.062	Procavia_capensis
ENSDARG00000042751	riok3	97	73.465	ENSPCOG00000022631	RIOK3	96	75.524	Propithecus_coquereli
ENSDARG00000042751	riok3	99	58.779	ENSPVAG00000015817	RIOK3	99	58.779	Pteropus_vampyrus
ENSDARG00000042751	riok3	100	78.585	ENSPNYG00000003271	riok3	99	78.585	Pundamilia_nyererei
ENSDARG00000042751	riok3	100	83.465	ENSPNAG00000006213	riok3	100	83.465	Pygocentrus_nattereri
ENSDARG00000042751	riok3	99	71.567	ENSRNOG00000023376	Riok3	99	71.676	Rattus_norvegicus
ENSDARG00000042751	riok3	97	73.360	ENSRBIG00000035071	RIOK3	96	75.058	Rhinopithecus_bieti
ENSDARG00000042751	riok3	97	73.360	ENSRROG00000045710	RIOK3	96	75.058	Rhinopithecus_roxellana
ENSDARG00000042751	riok3	97	73.956	ENSSBOG00000034387	RIOK3	95	75.520	Saimiri_boliviensis_boliviensis
ENSDARG00000042751	riok3	99	72.727	ENSSHAG00000011854	RIOK3	99	72.727	Sarcophilus_harrisii
ENSDARG00000042751	riok3	100	79.175	ENSSFOG00015012912	riok3	99	79.175	Scleropages_formosus
ENSDARG00000042751	riok3	99	78.782	ENSSMAG00000011527	riok3	99	78.782	Scophthalmus_maximus
ENSDARG00000042751	riok3	100	78.431	ENSSDUG00000016018	riok3	99	78.431	Seriola_dumerili
ENSDARG00000042751	riok3	66	80.541	ENSSLDG00000022246	riok3	94	80.541	Seriola_lalandi_dorsalis
ENSDARG00000042751	riok3	85	74.231	ENSSARG00000010154	RIOK3	83	74.231	Sorex_araneus
ENSDARG00000042751	riok3	97	76.815	ENSSPUG00000015246	RIOK3	96	76.815	Sphenodon_punctatus
ENSDARG00000042751	riok3	100	79.102	ENSSPAG00000000601	riok3	99	79.102	Stegastes_partitus
ENSDARG00000042751	riok3	97	73.810	ENSSSCG00000029518	RIOK3	99	77.854	Sus_scrofa
ENSDARG00000042751	riok3	97	75.397	ENSTGUG00000010392	RIOK3	96	75.397	Taeniopygia_guttata
ENSDARG00000042751	riok3	99	77.756	ENSTRUG00000007055	riok3	99	77.756	Takifugu_rubripes
ENSDARG00000042751	riok3	95	72.840	ENSTNIG00000001855	riok3	99	72.840	Tetraodon_nigroviridis
ENSDARG00000042751	riok3	53	80.556	ENSTBEG00000015851	RIOK3	52	80.556	Tupaia_belangeri
ENSDARG00000042751	riok3	97	72.871	ENSTTRG00000008839	RIOK3	96	72.871	Tursiops_truncatus
ENSDARG00000042751	riok3	97	73.948	ENSUAMG00000018410	RIOK3	95	73.948	Ursus_americanus
ENSDARG00000042751	riok3	95	74.694	ENSUMAG00000020218	RIOK3	92	74.694	Ursus_maritimus
ENSDARG00000042751	riok3	97	73.861	ENSVPAG00000009034	RIOK3	96	73.861	Vicugna_pacos
ENSDARG00000042751	riok3	97	73.852	ENSVVUG00000003651	RIOK3	73	73.852	Vulpes_vulpes
ENSDARG00000042751	riok3	97	72.967	ENSXETG00000027370	riok3	97	72.967	Xenopus_tropicalis
ENSDARG00000042751	riok3	97	76.566	ENSXCOG00000001032	riok3	100	76.566	Xiphophorus_couchianus
ENSDARG00000042751	riok3	100	75.835	ENSXMAG00000012902	riok3	99	75.835	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0004674	protein serine/threonine kinase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030490	maturation of SSU-rRNA	21873635.	IBA	Process
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function