EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000042839 (Gene tree)
Gene ID: 503603
Gene Symbol: dph6
Alias: atpbd4|si:ch1073-258j7.1|wu:fc57a01|zgc:110758
Full Name: diphthamine biosynthesis 6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 40703 bases
Position: chr17:53156530-53197232
Accession: ZDB-GENE-050227-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000106089	Ribonuc_L-PSP	PF01042.21	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000126277	-	1707	XM_017351632	ENSDARP00000106089	496 (aa)	XP_017207121	E7F9Q1
ENSDART00000156774	-	1542	-	ENSDARP00000129691	255 (aa)	-	A2RV01
ENSDART00000155981	-	337	-	ENSDARP00000128574	52 (aa)	-	X1WEC3

Gene Model

Click here to download ENSDARG00000042839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000042839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000042839	dph6	92	64.859	ENSAPOG00000011305	dph6	64	65.284	Acanthochromis_polyacanthus
ENSDARG00000042839	dph6	92	64.795	ENSAPEG00000016201	dph6	89	65.217	Amphiprion_percula
ENSDARG00000042839	dph6	92	65.227	ENSATEG00000010892	dph6	64	65.435	Anabas_testudineus
ENSDARG00000042839	dph6	92	56.957	ENSACAG00000029596	DPH6	64	56.739	Anolis_carolinensis
ENSDARG00000042839	dph6	92	64.847	ENSACLG00000013133	dph6	64	64.052	Astatotilapia_calliptera
ENSDARG00000042839	dph6	95	67.091	ENSAMXG00000014741	dph6	99	67.091	Astyanax_mexicanus
ENSDARG00000042839	dph6	92	56.616	ENSCPBG00000023858	DPH6	64	56.182	Chrysemys_picta_bellii
ENSDARG00000042839	dph6	91	48.253	ENSCING00000009826	-	80	48.465	Ciona_intestinalis
ENSDARG00000042839	dph6	98	62.423	ENSCSEG00000004856	dph6	97	62.218	Cynoglossus_semilaevis
ENSDARG00000042839	dph6	92	63.191	ENSELUG00000001148	dph6	67	62.115	Esox_lucius
ENSDARG00000042839	dph6	92	54.526	ENSFALG00000005671	DPH6	64	54.526	Ficedula_albicollis
ENSDARG00000042839	dph6	92	63.341	ENSFHEG00000020233	dph6	67	63.537	Fundulus_heteroclitus
ENSDARG00000042839	dph6	93	58.030	ENSGMOG00000009867	dph6	65	58.150	Gadus_morhua
ENSDARG00000042839	dph6	92	54.230	ENSGALG00000020438	DPH6	63	54.447	Gallus_gallus
ENSDARG00000042839	dph6	88	64.318	ENSGAFG00000019653	dph6	63	64.027	Gambusia_affinis
ENSDARG00000042839	dph6	92	60.480	ENSGACG00000010500	dph6	64	60.480	Gasterosteus_aculeatus
ENSDARG00000042839	dph6	92	56.616	ENSGAGG00000009638	DPH6	64	56.182	Gopherus_agassizii
ENSDARG00000042839	dph6	92	65.066	ENSHBUG00000017591	dph6	64	64.270	Haplochromis_burtoni
ENSDARG00000042839	dph6	92	64.629	ENSHCOG00000001351	dph6	96	64.192	Hippocampus_comes
ENSDARG00000042839	dph6	92	69.231	ENSIPUG00000006675	dph6	63	69.231	Ictalurus_punctatus
ENSDARG00000042839	dph6	98	63.730	ENSLBEG00000028338	dph6	99	63.730	Labrus_bergylta
ENSDARG00000042839	dph6	92	57.112	ENSLOCG00000012210	dph6	64	56.769	Lepisosteus_oculatus
ENSDARG00000042839	dph6	92	65.727	ENSMAMG00000005786	dph6	64	66.376	Mastacembelus_armatus
ENSDARG00000042839	dph6	92	64.847	ENSMZEG00005002494	dph6	64	64.052	Maylandia_zebra
ENSDARG00000042839	dph6	70	50.568	ENSMGAG00000012297	-	97	50.568	Meleagris_gallopavo
ENSDARG00000042839	dph6	92	53.879	ENSMODG00000001333	-	90	53.796	Monodelphis_domestica
ENSDARG00000042839	dph6	97	57.624	ENSNBRG00000023582	dph6	99	56.917	Neolamprologus_brichardi
ENSDARG00000042839	dph6	92	65.502	ENSONIG00000001400	dph6	64	64.706	Oreochromis_niloticus
ENSDARG00000042839	dph6	92	65.435	ENSORLG00000013143	dph6	93	65.217	Oryzias_latipes
ENSDARG00000042839	dph6	92	64.009	ENSORLG00020017769	dph6	64	64.410	Oryzias_latipes_hni
ENSDARG00000042839	dph6	92	64.009	ENSOMEG00000000356	dph6	68	64.348	Oryzias_melastigma
ENSDARG00000042839	dph6	93	55.889	ENSPSIG00000007964	DPH6	100	55.650	Pelodiscus_sinensis
ENSDARG00000042839	dph6	97	62.162	ENSPMGG00000022140	dph6	99	61.875	Periophthalmus_magnuspinnatus
ENSDARG00000042839	dph6	92	64.254	ENSPFOG00000015094	dph6	64	63.974	Poecilia_formosa
ENSDARG00000042839	dph6	71	50.279	ENSPLAG00000021283	-	50	50.279	Poecilia_latipinna
ENSDARG00000042839	dph6	71	61.299	ENSPMEG00000004238	-	57	60.955	Poecilia_mexicana
ENSDARG00000042839	dph6	97	62.450	ENSPNYG00000016746	dph6	98	61.723	Pundamilia_nyererei
ENSDARG00000042839	dph6	92	68.282	ENSPNAG00000008737	dph6	63	68.282	Pygocentrus_nattereri
ENSDARG00000042839	dph6	91	34.774	YLR143W	-	66	34.568	Saccharomyces_cerevisiae
ENSDARG00000042839	dph6	97	59.667	ENSSFOG00015010539	dph6	67	59.044	Scleropages_formosus
ENSDARG00000042839	dph6	92	65.789	ENSSMAG00000018800	dph6	64	65.142	Scophthalmus_maximus
ENSDARG00000042839	dph6	92	66.447	ENSSDUG00000015167	dph6	64	66.013	Seriola_dumerili
ENSDARG00000042839	dph6	92	65.510	ENSSLDG00000021120	dph6	64	65.939	Seriola_lalandi_dorsalis
ENSDARG00000042839	dph6	89	55.234	ENSSPUG00000008460	DPH6	63	55.011	Sphenodon_punctatus
ENSDARG00000042839	dph6	92	65.076	ENSSPAG00000015649	dph6	64	65.502	Stegastes_partitus
ENSDARG00000042839	dph6	92	65.293	ENSTRUG00000014191	dph6	64	65.495	Takifugu_rubripes
ENSDARG00000042839	dph6	92	56.455	ENSXETG00000012897	dph6	64	55.799	Xenopus_tropicalis
ENSDARG00000042839	dph6	92	64.474	ENSXMAG00000009590	dph6	64	64.192	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0016874	ligase activity	-	IEA	Function
GO:0017178	diphthine-ammonia ligase activity	21873635.	IBA	Function
GO:0017178	diphthine-ammonia ligase activity	-	IEA	Function
GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	21873635.	IBA	Process
GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	-	IEA	Process