EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000042851 (Gene tree)
Gene ID: 394071
Gene Symbol: srp9
Alias: zgc:56668
Full Name: signal recognition particle 9
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2763 bases
Position: chr20:36623807-36626569
Accession: ZDB-GENE-040426-1106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000124362	SRP9-21	PF05486.12	1.3e-13	1	1
ENSDARP00000062894	SRP9-21	PF05486.12	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000149171	-	725	-	ENSDARP00000124362	86 (aa)	-	Q7ZW94
ENSDART00000062895	-	596	-	ENSDARP00000062894	83 (aa)	-	F6NK53

Gene Model

Click here to download ENSDARG00000042851's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000042851's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000042851	srp9	100	77.907	ENSG00000143742	SRP9	100	77.907	Homo_sapiens
ENSDARG00000042851	srp9	100	93.023	ENSAPOG00000006089	srp9	100	93.023	Acanthochromis_polyacanthus
ENSDARG00000042851	srp9	100	77.907	ENSAMEG00000014744	SRP9	100	77.907	Ailuropoda_melanoleuca
ENSDARG00000042851	srp9	100	71.084	ENSACIG00000022298	srp9	100	71.084	Amphilophus_citrinellus
ENSDARG00000042851	srp9	100	93.023	ENSAOCG00000014643	srp9	100	93.023	Amphiprion_ocellaris
ENSDARG00000042851	srp9	100	93.023	ENSAPEG00000004398	srp9	100	93.023	Amphiprion_percula
ENSDARG00000042851	srp9	100	95.349	ENSATEG00000014339	srp9	100	95.349	Anabas_testudineus
ENSDARG00000042851	srp9	81	80.000	ENSAPLG00000015368	SRP9	100	80.000	Anas_platyrhynchos
ENSDARG00000042851	srp9	100	79.070	ENSACAG00000005788	SRP9	100	79.070	Anolis_carolinensis
ENSDARG00000042851	srp9	100	77.907	ENSANAG00000022626	SRP9	100	77.907	Aotus_nancymaae
ENSDARG00000042851	srp9	100	95.349	ENSACLG00000018392	srp9	100	95.349	Astatotilapia_calliptera
ENSDARG00000042851	srp9	100	95.349	ENSAMXG00000010366	srp9	100	95.349	Astyanax_mexicanus
ENSDARG00000042851	srp9	100	77.907	ENSBTAG00000033322	SRP9	100	77.907	Bos_taurus
ENSDARG00000042851	srp9	88	53.947	WBGene00013984	ZK512.4	100	53.947	Caenorhabditis_elegans
ENSDARG00000042851	srp9	100	77.907	ENSCJAG00000040095	SRP9	100	77.907	Callithrix_jacchus
ENSDARG00000042851	srp9	100	77.907	ENSCAFG00000016162	SRP9	100	77.907	Canis_familiaris
ENSDARG00000042851	srp9	100	77.907	ENSCAFG00020003285	SRP9	100	77.907	Canis_lupus_dingo
ENSDARG00000042851	srp9	100	77.907	ENSCHIG00000006407	SRP9	100	77.907	Capra_hircus
ENSDARG00000042851	srp9	100	75.581	ENSTSYG00000026832	SRP9	100	75.581	Carlito_syrichta
ENSDARG00000042851	srp9	100	77.907	ENSCPOG00000033454	SRP9	100	77.907	Cavia_porcellus
ENSDARG00000042851	srp9	100	76.744	ENSCCAG00000034464	SRP9	100	76.744	Cebus_capucinus
ENSDARG00000042851	srp9	100	76.744	ENSCATG00000041813	SRP9	100	76.744	Cercocebus_atys
ENSDARG00000042851	srp9	99	69.412	ENSCLAG00000017687	-	99	69.412	Chinchilla_lanigera
ENSDARG00000042851	srp9	100	76.744	ENSCLAG00000001368	-	100	76.744	Chinchilla_lanigera
ENSDARG00000042851	srp9	100	53.488	ENSCHOG00000012912	-	100	53.488	Choloepus_hoffmanni
ENSDARG00000042851	srp9	58	72.000	ENSCHOG00000008435	-	100	72.000	Choloepus_hoffmanni
ENSDARG00000042851	srp9	100	77.907	ENSCHOG00000006096	-	100	77.907	Choloepus_hoffmanni
ENSDARG00000042851	srp9	100	81.395	ENSCPBG00000011999	SRP9	100	81.395	Chrysemys_picta_bellii
ENSDARG00000042851	srp9	100	75.581	ENSCANG00000012015	-	100	75.581	Colobus_angolensis_palliatus
ENSDARG00000042851	srp9	100	76.744	ENSCANG00000030765	-	100	76.744	Colobus_angolensis_palliatus
ENSDARG00000042851	srp9	100	77.907	ENSCGRG00001008910	Srp9	100	77.907	Cricetulus_griseus_chok1gshd
ENSDARG00000042851	srp9	74	73.438	ENSCGRG00000009651	Srp9	84	73.438	Cricetulus_griseus_crigri
ENSDARG00000042851	srp9	100	94.186	ENSCSEG00000018438	srp9	100	94.186	Cynoglossus_semilaevis
ENSDARG00000042851	srp9	100	94.186	ENSCVAG00000001083	srp9	100	94.186	Cyprinodon_variegatus
ENSDARG00000042851	srp9	100	77.907	ENSDNOG00000013412	-	100	77.907	Dasypus_novemcinctus
ENSDARG00000042851	srp9	90	37.662	FBgn0035827	Srp9	100	37.662	Drosophila_melanogaster
ENSDARG00000042851	srp9	100	69.767	ENSETEG00000012291	SRP9	100	69.767	Echinops_telfairi
ENSDARG00000042851	srp9	98	73.810	ENSEBUG00000009080	srp9	100	73.810	Eptatretus_burgeri
ENSDARG00000042851	srp9	100	77.907	ENSECAG00000033839	SRP9	100	77.907	Equus_caballus
ENSDARG00000042851	srp9	100	72.093	ENSEEUG00000001344	SRP9	100	72.093	Erinaceus_europaeus
ENSDARG00000042851	srp9	100	94.186	ENSELUG00000001506	srp9	100	94.186	Esox_lucius
ENSDARG00000042851	srp9	100	77.907	ENSFCAG00000010275	SRP9	62	77.907	Felis_catus
ENSDARG00000042851	srp9	100	77.907	ENSFALG00000011689	SRP9	100	77.907	Ficedula_albicollis
ENSDARG00000042851	srp9	100	80.233	ENSFDAG00000020469	SRP9	100	80.233	Fukomys_damarensis
ENSDARG00000042851	srp9	100	94.186	ENSFHEG00000011666	srp9	100	94.186	Fundulus_heteroclitus
ENSDARG00000042851	srp9	100	91.860	ENSGMOG00000003565	srp9	100	91.860	Gadus_morhua
ENSDARG00000042851	srp9	100	79.070	ENSGALG00000026009	SRP9	100	79.070	Gallus_gallus
ENSDARG00000042851	srp9	100	95.349	ENSGAFG00000009506	srp9	100	95.349	Gambusia_affinis
ENSDARG00000042851	srp9	100	94.186	ENSGACG00000004110	srp9	100	94.186	Gasterosteus_aculeatus
ENSDARG00000042851	srp9	100	81.395	ENSGAGG00000017129	SRP9	100	81.395	Gopherus_agassizii
ENSDARG00000042851	srp9	100	77.907	ENSGGOG00000011555	SRP9	100	77.907	Gorilla_gorilla
ENSDARG00000042851	srp9	100	95.349	ENSHBUG00000021430	srp9	100	95.349	Haplochromis_burtoni
ENSDARG00000042851	srp9	98	71.429	ENSHGLG00000006535	-	99	71.429	Heterocephalus_glaber_female
ENSDARG00000042851	srp9	100	72.093	ENSHGLG00000020168	-	100	72.093	Heterocephalus_glaber_female
ENSDARG00000042851	srp9	93	77.500	ENSHGLG00000020925	-	100	77.500	Heterocephalus_glaber_female
ENSDARG00000042851	srp9	81	74.286	ENSHGLG00000019830	-	100	74.286	Heterocephalus_glaber_female
ENSDARG00000042851	srp9	100	77.907	ENSHGLG00000002329	SRP9	100	77.907	Heterocephalus_glaber_female
ENSDARG00000042851	srp9	100	72.093	ENSHGLG00100020800	-	100	72.093	Heterocephalus_glaber_male
ENSDARG00000042851	srp9	100	79.070	ENSHGLG00100019986	-	100	79.070	Heterocephalus_glaber_male
ENSDARG00000042851	srp9	100	67.442	ENSHGLG00100011806	-	100	67.442	Heterocephalus_glaber_male
ENSDARG00000042851	srp9	95	75.610	ENSHGLG00100016521	-	100	75.610	Heterocephalus_glaber_male
ENSDARG00000042851	srp9	98	71.429	ENSHGLG00100009760	-	99	71.429	Heterocephalus_glaber_male
ENSDARG00000042851	srp9	100	69.880	ENSHCOG00000006978	srp9	100	69.880	Hippocampus_comes
ENSDARG00000042851	srp9	100	94.186	ENSIPUG00000020674	srp9	100	94.186	Ictalurus_punctatus
ENSDARG00000042851	srp9	100	77.907	ENSSTOG00000026827	SRP9	100	77.907	Ictidomys_tridecemlineatus
ENSDARG00000042851	srp9	100	75.581	ENSJJAG00000016583	Srp9	100	75.581	Jaculus_jaculus
ENSDARG00000042851	srp9	100	91.860	ENSKMAG00000014117	srp9	100	91.860	Kryptolebias_marmoratus
ENSDARG00000042851	srp9	100	94.186	ENSLBEG00000020620	srp9	100	94.186	Labrus_bergylta
ENSDARG00000042851	srp9	100	86.047	ENSLACG00000007546	SRP9	100	86.047	Latimeria_chalumnae
ENSDARG00000042851	srp9	100	93.023	ENSLOCG00000015903	srp9	100	93.023	Lepisosteus_oculatus
ENSDARG00000042851	srp9	100	76.744	ENSLAFG00000004081	SRP9	100	76.744	Loxodonta_africana
ENSDARG00000042851	srp9	100	76.744	ENSMFAG00000002641	SRP9	100	76.744	Macaca_fascicularis
ENSDARG00000042851	srp9	100	76.744	ENSMMUG00000000134	SRP9	100	76.744	Macaca_mulatta
ENSDARG00000042851	srp9	100	76.744	ENSMNEG00000043512	SRP9	100	76.744	Macaca_nemestrina
ENSDARG00000042851	srp9	100	76.744	ENSMLEG00000037309	SRP9	100	76.744	Mandrillus_leucophaeus
ENSDARG00000042851	srp9	100	95.349	ENSMAMG00000004755	srp9	100	95.349	Mastacembelus_armatus
ENSDARG00000042851	srp9	100	95.349	ENSMZEG00005015517	srp9	100	95.349	Maylandia_zebra
ENSDARG00000042851	srp9	100	79.070	ENSMGAG00000008061	SRP9	100	79.070	Meleagris_gallopavo
ENSDARG00000042851	srp9	100	77.907	ENSMAUG00000017552	Srp9	100	77.907	Mesocricetus_auratus
ENSDARG00000042851	srp9	100	75.581	ENSMICG00000030104	-	100	75.581	Microcebus_murinus
ENSDARG00000042851	srp9	100	75.581	ENSMOCG00000012590	Srp9	100	75.581	Microtus_ochrogaster
ENSDARG00000042851	srp9	100	90.805	ENSMMOG00000014838	srp9	100	90.805	Mola_mola
ENSDARG00000042851	srp9	100	79.070	ENSMODG00000025664	SRP9	100	79.070	Monodelphis_domestica
ENSDARG00000042851	srp9	100	95.349	ENSMALG00000004262	srp9	100	95.349	Monopterus_albus
ENSDARG00000042851	srp9	100	76.744	MGP_CAROLIEiJ_G0014997	Srp9	100	76.744	Mus_caroli
ENSDARG00000042851	srp9	100	76.744	ENSMUSG00000026511	Srp9	100	76.744	Mus_musculus
ENSDARG00000042851	srp9	100	74.419	MGP_PahariEiJ_G0028229	Srp9	100	74.419	Mus_pahari
ENSDARG00000042851	srp9	100	76.744	MGP_SPRETEiJ_G0015797	Srp9	100	76.744	Mus_spretus
ENSDARG00000042851	srp9	100	76.744	ENSMLUG00000014914	SRP9	100	76.744	Myotis_lucifugus
ENSDARG00000042851	srp9	100	77.907	ENSNGAG00000019936	Srp9	100	77.907	Nannospalax_galili
ENSDARG00000042851	srp9	100	95.349	ENSNBRG00000010915	srp9	100	95.349	Neolamprologus_brichardi
ENSDARG00000042851	srp9	100	77.907	ENSNLEG00000013740	SRP9	100	77.907	Nomascus_leucogenys
ENSDARG00000042851	srp9	100	77.907	ENSOPRG00000012133	SRP9	100	77.907	Ochotona_princeps
ENSDARG00000042851	srp9	100	67.045	ENSODEG00000010125	-	76	67.045	Octodon_degus
ENSDARG00000042851	srp9	100	72.093	ENSODEG00000015075	-	100	72.093	Octodon_degus
ENSDARG00000042851	srp9	100	94.186	ENSONIG00000011409	srp9	100	94.186	Oreochromis_niloticus
ENSDARG00000042851	srp9	100	79.070	ENSOANG00000001472	SRP9	100	79.070	Ornithorhynchus_anatinus
ENSDARG00000042851	srp9	100	77.907	ENSOCUG00000010791	SRP9	100	77.907	Oryctolagus_cuniculus
ENSDARG00000042851	srp9	100	90.698	ENSORLG00020003090	srp9	100	90.698	Oryzias_latipes_hni
ENSDARG00000042851	srp9	100	90.698	ENSORLG00015001636	srp9	89	90.698	Oryzias_latipes_hsok
ENSDARG00000042851	srp9	100	91.860	ENSOMEG00000020548	srp9	100	91.860	Oryzias_melastigma
ENSDARG00000042851	srp9	100	76.744	ENSOGAG00000031299	-	100	76.744	Otolemur_garnettii
ENSDARG00000042851	srp9	100	76.744	ENSOGAG00000001752	-	100	76.744	Otolemur_garnettii
ENSDARG00000042851	srp9	100	77.907	ENSPPAG00000042680	SRP9	100	77.907	Pan_paniscus
ENSDARG00000042851	srp9	100	77.907	ENSPPRG00000011732	SRP9	100	77.907	Panthera_pardus
ENSDARG00000042851	srp9	71	75.410	ENSPTIG00000014838	SRP9	71	75.410	Panthera_tigris_altaica
ENSDARG00000042851	srp9	100	77.907	ENSPTRG00000002038	SRP9	100	77.907	Pan_troglodytes
ENSDARG00000042851	srp9	100	76.744	ENSPANG00000030164	SRP9	100	76.744	Papio_anubis
ENSDARG00000042851	srp9	100	90.698	ENSPKIG00000015012	srp9	100	90.698	Paramormyrops_kingsleyae
ENSDARG00000042851	srp9	100	81.395	ENSPSIG00000014842	SRP9	100	81.395	Pelodiscus_sinensis
ENSDARG00000042851	srp9	100	67.470	ENSPMGG00000002318	srp9	100	67.470	Periophthalmus_magnuspinnatus
ENSDARG00000042851	srp9	100	79.070	ENSPEMG00000022774	Srp9	100	79.070	Peromyscus_maniculatus_bairdii
ENSDARG00000042851	srp9	100	79.070	ENSPCIG00000017399	SRP9	100	79.070	Phascolarctos_cinereus
ENSDARG00000042851	srp9	100	95.349	ENSPREG00000020242	srp9	100	95.349	Poecilia_reticulata
ENSDARG00000042851	srp9	97	78.313	ENSPPYG00000000174	SRP9	100	78.313	Pongo_abelii
ENSDARG00000042851	srp9	100	76.744	ENSPCAG00000014886	SRP9	100	76.744	Procavia_capensis
ENSDARG00000042851	srp9	100	62.921	ENSPCOG00000012531	-	100	62.921	Propithecus_coquereli
ENSDARG00000042851	srp9	71	73.770	ENSPCOG00000021743	-	98	73.770	Propithecus_coquereli
ENSDARG00000042851	srp9	100	77.907	ENSPVAG00000008142	SRP9	100	77.907	Pteropus_vampyrus
ENSDARG00000042851	srp9	100	95.349	ENSPNYG00000010536	srp9	100	95.349	Pundamilia_nyererei
ENSDARG00000042851	srp9	100	95.349	ENSPNAG00000008264	srp9	100	95.349	Pygocentrus_nattereri
ENSDARG00000042851	srp9	100	77.907	ENSRNOG00000003211	Srp9	100	77.907	Rattus_norvegicus
ENSDARG00000042851	srp9	100	76.744	ENSRBIG00000040480	SRP9	100	76.744	Rhinopithecus_bieti
ENSDARG00000042851	srp9	100	76.744	ENSRROG00000028703	SRP9	100	76.744	Rhinopithecus_roxellana
ENSDARG00000042851	srp9	100	77.907	ENSSBOG00000034573	SRP9	100	77.907	Saimiri_boliviensis_boliviensis
ENSDARG00000042851	srp9	100	79.070	ENSSHAG00000013504	SRP9	100	79.070	Sarcophilus_harrisii
ENSDARG00000042851	srp9	100	88.372	ENSSFOG00015000310	srp9	100	88.372	Scleropages_formosus
ENSDARG00000042851	srp9	100	95.349	ENSSMAG00000001318	srp9	100	95.349	Scophthalmus_maximus
ENSDARG00000042851	srp9	100	96.512	ENSSDUG00000008772	srp9	100	96.512	Seriola_dumerili
ENSDARG00000042851	srp9	87	94.667	ENSSLDG00000019141	srp9	95	94.667	Seriola_lalandi_dorsalis
ENSDARG00000042851	srp9	100	59.302	ENSSPUG00000014436	SRP9	100	59.302	Sphenodon_punctatus
ENSDARG00000042851	srp9	100	95.349	ENSSPAG00000017244	srp9	100	95.349	Stegastes_partitus
ENSDARG00000042851	srp9	100	77.907	ENSSSCG00000031664	-	100	77.907	Sus_scrofa
ENSDARG00000042851	srp9	100	77.907	ENSTGUG00000004123	SRP9	100	77.907	Taeniopygia_guttata
ENSDARG00000042851	srp9	100	89.535	ENSTRUG00000024107	srp9	100	89.535	Takifugu_rubripes
ENSDARG00000042851	srp9	100	89.535	ENSTNIG00000007254	srp9	100	89.535	Tetraodon_nigroviridis
ENSDARG00000042851	srp9	100	76.744	ENSTBEG00000005634	SRP9	100	76.744	Tupaia_belangeri
ENSDARG00000042851	srp9	71	75.410	ENSTTRG00000010081	SRP9	98	75.410	Tursiops_truncatus
ENSDARG00000042851	srp9	100	77.907	ENSUAMG00000020489	SRP9	100	77.907	Ursus_americanus
ENSDARG00000042851	srp9	100	77.907	ENSUMAG00000015908	SRP9	100	77.907	Ursus_maritimus
ENSDARG00000042851	srp9	71	75.410	ENSVPAG00000001698	SRP9	98	75.410	Vicugna_pacos
ENSDARG00000042851	srp9	100	77.907	ENSVVUG00000002065	SRP9	100	77.907	Vulpes_vulpes
ENSDARG00000042851	srp9	100	94.186	ENSXCOG00000000662	srp9	100	94.186	Xiphophorus_couchianus
ENSDARG00000042851	srp9	100	94.186	ENSXMAG00000029514	srp9	100	94.186	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	21873635.	IBA	Component
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	-	IEA	Component
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	-	IEA	Process
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0008312	7S RNA binding	-	IEA	Function
GO:0045900	negative regulation of translational elongation	-	IEA	Process
GO:0048500	signal recognition particle	-	IEA	Component