EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000043304 (Gene tree)
Gene ID: 321130
Gene Symbol: nop2
Alias: cb164|im:6893299|sb:cb164|si:dkey-91i17.1
Full Name: NOP2 nucleolar protein homolog (yeast)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 17359 bases
Position: chr16:17234540-17251898
Accession: ZDB-GENE-050309-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000102247	Methyltr_RsmB-F	PF01189.17	5.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000129638	-	797	-	-	- (aa)	-	-
ENSDART00000114272	-	2767	XM_005157940	ENSDARP00000102247	739 (aa)	XP_005157997	F1QWP7

Gene Model

Click here to download ENSDARG00000043304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000043304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000043304	nop2	81	65.957	ENSAPOG00000023186	nop2	99	61.923	Acanthochromis_polyacanthus
ENSDARG00000043304	nop2	80	62.438	ENSAMEG00000014268	-	80	59.361	Ailuropoda_melanoleuca
ENSDARG00000043304	nop2	79	68.844	ENSACIG00000011803	nop2	99	64.847	Amphilophus_citrinellus
ENSDARG00000043304	nop2	99	63.351	ENSAPEG00000011152	nop2	99	64.201	Amphiprion_percula
ENSDARG00000043304	nop2	82	61.719	ENSACAG00000006397	-	88	61.646	Anolis_carolinensis
ENSDARG00000043304	nop2	99	67.355	ENSAMXG00000018985	nop2	99	69.100	Astyanax_mexicanus
ENSDARG00000043304	nop2	80	63.427	ENSBTAG00000014733	NOP2	72	64.098	Bos_taurus
ENSDARG00000043304	nop2	62	52.174	WBGene00021073	nol-1	73	55.738	Caenorhabditis_elegans
ENSDARG00000043304	nop2	89	59.883	ENSCAFG00000015034	NOP2	81	58.382	Canis_familiaris
ENSDARG00000043304	nop2	89	60.444	ENSCAFG00020002884	-	80	58.918	Canis_lupus_dingo
ENSDARG00000043304	nop2	80	64.430	ENSCHIG00000018560	-	72	64.238	Capra_hircus
ENSDARG00000043304	nop2	80	59.404	ENSTSYG00000006030	-	51	71.689	Carlito_syrichta
ENSDARG00000043304	nop2	64	66.383	ENSCAPG00000011953	-	60	68.398	Cavia_aperea
ENSDARG00000043304	nop2	80	63.805	ENSCPOG00000020690	-	73	63.606	Cavia_porcellus
ENSDARG00000043304	nop2	80	61.857	ENSCLAG00000014440	-	74	63.184	Chinchilla_lanigera
ENSDARG00000043304	nop2	81	63.533	ENSCSAG00000010484	-	85	58.368	Chlorocebus_sabaeus
ENSDARG00000043304	nop2	65	81.818	ENSCPBG00000027725	-	84	81.818	Chrysemys_picta_bellii
ENSDARG00000043304	nop2	65	61.066	ENSCING00000008548	-	99	53.234	Ciona_intestinalis
ENSDARG00000043304	nop2	86	60.856	ENSCANG00000038803	-	100	61.374	Colobus_angolensis_palliatus
ENSDARG00000043304	nop2	80	65.541	ENSCGRG00001020970	Nop2	73	64.189	Cricetulus_griseus_chok1gshd
ENSDARG00000043304	nop2	80	65.541	ENSCGRG00000015782	Nop2	73	64.189	Cricetulus_griseus_crigri
ENSDARG00000043304	nop2	99	58.056	ENSCSEG00000020126	nop2	99	58.488	Cynoglossus_semilaevis
ENSDARG00000043304	nop2	81	70.942	ENSCVAG00000001162	nop2	99	65.633	Cyprinodon_variegatus
ENSDARG00000043304	nop2	80	62.806	ENSDNOG00000001133	-	74	62.866	Dasypus_novemcinctus
ENSDARG00000043304	nop2	61	58.129	FBgn0033741	CG8545	82	44.314	Drosophila_melanogaster
ENSDARG00000043304	nop2	57	67.139	ENSEBUG00000009820	nop2	75	67.139	Eptatretus_burgeri
ENSDARG00000043304	nop2	86	58.896	ENSEASG00005016153	-	79	58.894	Equus_asinus_asinus
ENSDARG00000043304	nop2	86	59.125	ENSECAG00000012639	NOP2	78	58.982	Equus_caballus
ENSDARG00000043304	nop2	59	66.059	ENSEEUG00000011692	-	63	66.059	Erinaceus_europaeus
ENSDARG00000043304	nop2	97	65.047	ENSELUG00000017384	nop2	99	65.298	Esox_lucius
ENSDARG00000043304	nop2	89	60.148	ENSFCAG00000006876	-	80	58.576	Felis_catus
ENSDARG00000043304	nop2	83	61.489	ENSFALG00000004797	-	91	61.231	Ficedula_albicollis
ENSDARG00000043304	nop2	77	69.948	ENSFHEG00000014327	nop2	94	69.492	Fundulus_heteroclitus
ENSDARG00000043304	nop2	52	83.896	ENSGMOG00000011005	nop2	99	76.471	Gadus_morhua
ENSDARG00000043304	nop2	63	70.513	ENSGALG00000037807	-	82	71.491	Gallus_gallus
ENSDARG00000043304	nop2	61	79.029	ENSGACG00000010317	nop2	98	78.808	Gasterosteus_aculeatus
ENSDARG00000043304	nop2	85	60.426	ENSGAGG00000001438	-	98	57.202	Gopherus_agassizii
ENSDARG00000043304	nop2	86	60.583	ENSGGOG00000001926	NOP2	100	60.398	Gorilla_gorilla
ENSDARG00000043304	nop2	73	61.861	ENSHBUG00000014908	nop2	100	56.266	Haplochromis_burtoni
ENSDARG00000043304	nop2	98	63.648	ENSHCOG00000017852	nop2	94	64.973	Hippocampus_comes
ENSDARG00000043304	nop2	94	69.873	ENSIPUG00000008198	nop2	98	70.014	Ictalurus_punctatus
ENSDARG00000043304	nop2	99	65.486	ENSLBEG00000007281	nop2	99	64.961	Labrus_bergylta
ENSDARG00000043304	nop2	75	68.271	ENSLOCG00000007050	nop2	100	68.327	Lepisosteus_oculatus
ENSDARG00000043304	nop2	80	64.677	ENSLAFG00000002784	-	72	64.883	Loxodonta_africana
ENSDARG00000043304	nop2	99	67.275	ENSMAMG00000001909	nop2	99	67.014	Mastacembelus_armatus
ENSDARG00000043304	nop2	99	63.241	ENSMZEG00005017552	nop2	100	63.373	Maylandia_zebra
ENSDARG00000043304	nop2	76	62.148	ENSMGAG00000014082	-	96	71.903	Meleagris_gallopavo
ENSDARG00000043304	nop2	64	64.228	ENSMICG00000006570	-	73	59.213	Microcebus_murinus
ENSDARG00000043304	nop2	94	57.225	ENSMOCG00000017237	Nop2	79	60.278	Microtus_ochrogaster
ENSDARG00000043304	nop2	93	54.132	ENSMODG00000018077	-	97	54.897	Monodelphis_domestica
ENSDARG00000043304	nop2	80	64.358	ENSMUSG00000038279	Nop2	73	64.478	Mus_musculus
ENSDARG00000043304	nop2	97	55.744	ENSMPUG00000016865	-	87	57.162	Mustela_putorius_furo
ENSDARG00000043304	nop2	80	59.042	ENSMLUG00000014333	-	50	87.879	Myotis_lucifugus
ENSDARG00000043304	nop2	80	64.489	ENSNGAG00000019010	Nop2	72	64.570	Nannospalax_galili
ENSDARG00000043304	nop2	86	61.196	ENSNLEG00000004242	-	100	61.162	Nomascus_leucogenys
ENSDARG00000043304	nop2	85	57.824	ENSMEUG00000015287	-	95	58.396	Notamacropus_eugenii
ENSDARG00000043304	nop2	64	90.909	ENSOPRG00000003412	-	56	90.909	Ochotona_princeps
ENSDARG00000043304	nop2	74	69.395	ENSONIG00000012896	nop2	99	64.474	Oreochromis_niloticus
ENSDARG00000043304	nop2	80	64.013	ENSOCUG00000008203	-	83	56.742	Oryctolagus_cuniculus
ENSDARG00000043304	nop2	99	66.230	ENSORLG00020005484	nop2	99	66.144	Oryzias_latipes_hni
ENSDARG00000043304	nop2	74	64.464	ENSOMEG00000012751	nop2	99	56.308	Oryzias_melastigma
ENSDARG00000043304	nop2	80	63.666	ENSOARG00000007641	-	73	62.821	Ovis_aries
ENSDARG00000043304	nop2	84	60.458	ENSPPRG00000012300	-	78	59.820	Panthera_pardus
ENSDARG00000043304	nop2	84	60.458	ENSPTIG00000020543	-	77	59.670	Panthera_tigris_altaica
ENSDARG00000043304	nop2	86	61.883	ENSPANG00000024426	-	95	64.019	Papio_anubis
ENSDARG00000043304	nop2	80	63.934	ENSPSIG00000016127	-	99	63.115	Pelodiscus_sinensis
ENSDARG00000043304	nop2	80	63.987	ENSPEMG00000013138	Nop2	73	63.880	Peromyscus_maniculatus_bairdii
ENSDARG00000043304	nop2	53	75.573	ENSPMAG00000009402	nop2	97	75.969	Petromyzon_marinus
ENSDARG00000043304	nop2	83	58.533	ENSPCIG00000001788	-	79	58.995	Phascolarctos_cinereus
ENSDARG00000043304	nop2	91	64.655	ENSPFOG00000013054	nop2	99	61.733	Poecilia_formosa
ENSDARG00000043304	nop2	98	64.123	ENSPLAG00000005975	nop2	99	64.286	Poecilia_latipinna
ENSDARG00000043304	nop2	96	62.219	ENSPMEG00000016775	nop2	99	62.242	Poecilia_mexicana
ENSDARG00000043304	nop2	79	72.461	ENSPREG00000010428	nop2	87	72.308	Poecilia_reticulata
ENSDARG00000043304	nop2	81	63.666	ENSPPYG00000004191	-	85	58.322	Pongo_abelii
ENSDARG00000043304	nop2	100	53.506	ENSPCAG00000007033	-	69	62.806	Procavia_capensis
ENSDARG00000043304	nop2	71	82.741	ENSPVAG00000012572	-	62	82.741	Pteropus_vampyrus
ENSDARG00000043304	nop2	99	58.847	ENSPNYG00000023163	nop2	100	58.658	Pundamilia_nyererei
ENSDARG00000043304	nop2	100	68.807	ENSPNAG00000019880	nop2	100	68.455	Pygocentrus_nattereri
ENSDARG00000043304	nop2	80	63.682	ENSRNOG00000018453	Nop2	74	63.167	Rattus_norvegicus
ENSDARG00000043304	nop2	86	61.009	ENSRROG00000041019	-	100	61.527	Rhinopithecus_roxellana
ENSDARG00000043304	nop2	52	60.000	YNL061W	NOP2	61	60.000	Saccharomyces_cerevisiae
ENSDARG00000043304	nop2	81	63.695	ENSSBOG00000034622	-	85	58.123	Saimiri_boliviensis_boliviensis
ENSDARG00000043304	nop2	59	69.406	ENSSHAG00000015028	-	99	58.179	Sarcophilus_harrisii
ENSDARG00000043304	nop2	95	64.365	ENSSFOG00015002458	nop2	99	64.636	Scleropages_formosus
ENSDARG00000043304	nop2	81	70.772	ENSSMAG00000011738	nop2	99	64.981	Scophthalmus_maximus
ENSDARG00000043304	nop2	54	62.857	ENSSARG00000004520	-	66	63.158	Sorex_araneus
ENSDARG00000043304	nop2	89	54.506	ENSSPUG00000015240	-	60	75.561	Sphenodon_punctatus
ENSDARG00000043304	nop2	81	69.722	ENSSPAG00000005491	nop2	99	64.258	Stegastes_partitus
ENSDARG00000043304	nop2	92	58.179	ENSSSCG00000000696	-	79	63.158	Sus_scrofa
ENSDARG00000043304	nop2	80	62.312	ENSTGUG00000013336	-	99	61.138	Taeniopygia_guttata
ENSDARG00000043304	nop2	95	59.203	ENSTRUG00000002011	nop2	99	59.055	Takifugu_rubripes
ENSDARG00000043304	nop2	90	65.923	ENSTNIG00000008046	nop2	100	65.379	Tetraodon_nigroviridis
ENSDARG00000043304	nop2	80	61.500	ENSTTRG00000016100	-	69	60.194	Tursiops_truncatus
ENSDARG00000043304	nop2	80	63.487	ENSUAMG00000016105	-	73	62.908	Ursus_americanus
ENSDARG00000043304	nop2	80	63.487	ENSUMAG00000007220	-	73	62.908	Ursus_maritimus
ENSDARG00000043304	nop2	89	60.597	ENSVVUG00000011466	-	83	60.180	Vulpes_vulpes
ENSDARG00000043304	nop2	80	57.711	ENSXETG00000011515	nop2	99	57.460	Xenopus_tropicalis
ENSDARG00000043304	nop2	96	64.926	ENSXMAG00000011483	nop2	99	64.660	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	-	IEA	Function
GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	21873635.	IBA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process
GO:0070475	rRNA base methylation	21873635.	IBA	Process