EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000043404 (Gene tree)
Gene ID: 445136
Gene Symbol: rpp21
Alias: rpp2|zgc:100862
Full Name: ribonuclease P 21 subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8144 bases
Position: chr22:15429099-15437242
Accession: ZDB-GENE-040801-37
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000063718	Rpr2	PF04032.16	1.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000063719	-	1394	-	ENSDARP00000063718	165 (aa)	-	Q1L878

Gene Model

Click here to download ENSDARG00000043404's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000043404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000043404	rpp21	76	64.800	ENSG00000241370	RPP21	86	65.600	Homo_sapiens
ENSDARG00000043404	rpp21	93	63.636	ENSAPOG00000008135	rpp21	98	63.636	Acanthochromis_polyacanthus
ENSDARG00000043404	rpp21	93	62.338	ENSACIG00000013344	rpp21	98	62.338	Amphilophus_citrinellus
ENSDARG00000043404	rpp21	95	61.538	ENSAOCG00000004192	rpp21	97	61.538	Amphiprion_ocellaris
ENSDARG00000043404	rpp21	95	60.897	ENSAPEG00000013689	-	98	61.039	Amphiprion_percula
ENSDARG00000043404	rpp21	93	63.399	ENSATEG00000016264	rpp21	97	63.399	Anabas_testudineus
ENSDARG00000043404	rpp21	74	73.770	ENSACAG00000011124	RPP21	99	73.770	Anolis_carolinensis
ENSDARG00000043404	rpp21	92	64.238	ENSACLG00000014185	rpp21	96	64.238	Astatotilapia_calliptera
ENSDARG00000043404	rpp21	90	74.000	ENSAMXG00000030709	rpp21	97	74.000	Astyanax_mexicanus
ENSDARG00000043404	rpp21	74	69.672	ENSBTAG00000050907	RPP21	70	69.672	Bos_taurus
ENSDARG00000043404	rpp21	75	65.041	ENSCAFG00000000394	RPP21	51	65.854	Canis_familiaris
ENSDARG00000043404	rpp21	75	66.935	ENSCHIG00000015983	RPP21	80	66.935	Capra_hircus
ENSDARG00000043404	rpp21	72	51.639	ENSTSYG00000034484	-	77	51.639	Carlito_syrichta
ENSDARG00000043404	rpp21	74	66.393	ENSTSYG00000033346	-	79	67.213	Carlito_syrichta
ENSDARG00000043404	rpp21	75	50.758	ENSTSYG00000013429	-	79	50.758	Carlito_syrichta
ENSDARG00000043404	rpp21	72	51.639	ENSTSYG00000034615	-	77	51.639	Carlito_syrichta
ENSDARG00000043404	rpp21	75	45.968	ENSTSYG00000010569	-	77	45.968	Carlito_syrichta
ENSDARG00000043404	rpp21	81	64.662	ENSCPOG00000006048	RPP21	82	64.662	Cavia_porcellus
ENSDARG00000043404	rpp21	81	61.654	ENSCLAG00000010598	RPP21	89	63.910	Chinchilla_lanigera
ENSDARG00000043404	rpp21	74	67.213	ENSCSAG00000008160	RPP21	80	66.935	Chlorocebus_sabaeus
ENSDARG00000043404	rpp21	68	68.142	ENSCPBG00000018817	RPP21	64	69.912	Chrysemys_picta_bellii
ENSDARG00000043404	rpp21	70	47.826	ENSCING00000019032	-	85	47.826	Ciona_intestinalis
ENSDARG00000043404	rpp21	70	46.957	ENSCSAVG00000010664	-	86	46.957	Ciona_savignyi
ENSDARG00000043404	rpp21	74	67.213	ENSCANG00000011612	-	80	66.935	Colobus_angolensis_palliatus
ENSDARG00000043404	rpp21	79	68.702	ENSCGRG00001011454	Rpp21	94	68.702	Cricetulus_griseus_chok1gshd
ENSDARG00000043404	rpp21	93	64.052	ENSCSEG00000004131	rpp21	97	64.052	Cynoglossus_semilaevis
ENSDARG00000043404	rpp21	97	64.634	ENSCVAG00000015508	rpp21	99	64.634	Cyprinodon_variegatus
ENSDARG00000043404	rpp21	75	44.286	ENSETEG00000019458	-	82	44.286	Echinops_telfairi
ENSDARG00000043404	rpp21	74	60.902	ENSEASG00005018608	RPP21	80	61.654	Equus_asinus_asinus
ENSDARG00000043404	rpp21	74	55.782	ENSEEUG00000009996	RPP21	99	55.782	Erinaceus_europaeus
ENSDARG00000043404	rpp21	83	71.533	ENSELUG00000012638	rpp21	94	71.533	Esox_lucius
ENSDARG00000043404	rpp21	72	65.546	ENSFCAG00000034409	RPP21	77	68.067	Felis_catus
ENSDARG00000043404	rpp21	81	63.910	ENSFDAG00000012690	RPP21	89	65.414	Fukomys_damarensis
ENSDARG00000043404	rpp21	78	69.466	ENSFHEG00000001048	-	69	69.466	Fundulus_heteroclitus
ENSDARG00000043404	rpp21	72	71.186	ENSGAFG00000007229	rpp21	89	71.186	Gambusia_affinis
ENSDARG00000043404	rpp21	79	68.702	ENSGAGG00000014525	RPP21	74	70.229	Gopherus_agassizii
ENSDARG00000043404	rpp21	69	73.684	ENSHBUG00000015712	rpp21	100	73.684	Haplochromis_burtoni
ENSDARG00000043404	rpp21	81	63.910	ENSHGLG00000017208	RPP21	86	64.662	Heterocephalus_glaber_female
ENSDARG00000043404	rpp21	81	63.910	ENSHGLG00100009543	RPP21	86	64.662	Heterocephalus_glaber_male
ENSDARG00000043404	rpp21	91	58.824	ENSHCOG00000016770	rpp21	96	58.824	Hippocampus_comes
ENSDARG00000043404	rpp21	87	77.778	ENSIPUG00000024910	rpp21	93	77.778	Ictalurus_punctatus
ENSDARG00000043404	rpp21	74	68.852	ENSSTOG00000001680	RPP21	75	69.672	Ictidomys_tridecemlineatus
ENSDARG00000043404	rpp21	74	67.213	ENSJJAG00000011176	-	78	69.355	Jaculus_jaculus
ENSDARG00000043404	rpp21	93	63.057	ENSKMAG00000004174	rpp21	98	63.057	Kryptolebias_marmoratus
ENSDARG00000043404	rpp21	79	68.462	ENSLBEG00000010436	rpp21	78	68.462	Labrus_bergylta
ENSDARG00000043404	rpp21	75	76.423	ENSLACG00000001685	rpp21	78	76.423	Latimeria_chalumnae
ENSDARG00000043404	rpp21	95	71.875	ENSLOCG00000005595	rpp21	100	71.875	Lepisosteus_oculatus
ENSDARG00000043404	rpp21	74	66.393	ENSLAFG00000010777	-	78	69.672	Loxodonta_africana
ENSDARG00000043404	rpp21	93	65.385	ENSMAMG00000016016	rpp21	98	65.385	Mastacembelus_armatus
ENSDARG00000043404	rpp21	92	64.238	ENSMZEG00005019901	rpp21	96	64.238	Maylandia_zebra
ENSDARG00000043404	rpp21	79	68.462	ENSMAUG00000018282	Rpp21	81	68.462	Mesocricetus_auratus
ENSDARG00000043404	rpp21	75	70.968	ENSMOCG00000021357	Rpp21	77	70.968	Microtus_ochrogaster
ENSDARG00000043404	rpp21	74	74.590	ENSMMOG00000003373	rpp21	81	74.590	Mola_mola
ENSDARG00000043404	rpp21	74	68.852	ENSMODG00000015967	RPP21	79	68.852	Monodelphis_domestica
ENSDARG00000043404	rpp21	96	61.006	ENSMALG00000008960	rpp21	99	61.006	Monopterus_albus
ENSDARG00000043404	rpp21	79	66.923	MGP_CAROLIEiJ_G0021549	Rpp21	85	69.466	Mus_caroli
ENSDARG00000043404	rpp21	79	68.462	ENSMUSG00000024446	Rpp21	85	69.466	Mus_musculus
ENSDARG00000043404	rpp21	79	66.923	MGP_PahariEiJ_G0020546	Rpp21	85	69.466	Mus_pahari
ENSDARG00000043404	rpp21	79	66.923	MGP_SPRETEiJ_G0022458	Rpp21	85	69.466	Mus_spretus
ENSDARG00000043404	rpp21	74	65.574	ENSMPUG00000011835	RPP21	61	66.393	Mustela_putorius_furo
ENSDARG00000043404	rpp21	76	67.717	ENSNGAG00000001765	Rpp21	79	70.492	Nannospalax_galili
ENSDARG00000043404	rpp21	92	64.238	ENSNBRG00000000289	rpp21	96	64.238	Neolamprologus_brichardi
ENSDARG00000043404	rpp21	74	54.795	ENSOPRG00000005181	-	85	56.757	Ochotona_princeps
ENSDARG00000043404	rpp21	74	54.795	ENSOPRG00000006566	-	85	56.757	Ochotona_princeps
ENSDARG00000043404	rpp21	81	63.158	ENSODEG00000018027	RPP21	82	65.414	Octodon_degus
ENSDARG00000043404	rpp21	92	64.238	ENSONIG00000002839	rpp21	96	64.238	Oreochromis_niloticus
ENSDARG00000043404	rpp21	95	64.103	ENSORLG00000001568	rpp21	100	64.103	Oryzias_latipes
ENSDARG00000043404	rpp21	73	75.833	ENSORLG00020009421	rpp21	77	75.833	Oryzias_latipes_hni
ENSDARG00000043404	rpp21	79	72.519	ENSORLG00015005836	rpp21	83	72.519	Oryzias_latipes_hsok
ENSDARG00000043404	rpp21	70	75.652	ENSOMEG00000012626	rpp21	99	71.429	Oryzias_melastigma
ENSDARG00000043404	rpp21	75	66.935	ENSOARG00000012840	RPP21	69	66.935	Ovis_aries
ENSDARG00000043404	rpp21	74	66.393	ENSPPRG00000007503	RPP21	79	66.393	Panthera_pardus
ENSDARG00000043404	rpp21	84	60.870	ENSPTIG00000012252	RPP21	93	63.043	Panthera_tigris_altaica
ENSDARG00000043404	rpp21	92	65.605	ENSPKIG00000002378	rpp21	97	65.605	Paramormyrops_kingsleyae
ENSDARG00000043404	rpp21	79	69.466	ENSPMGG00000009953	rpp21	85	74.790	Periophthalmus_magnuspinnatus
ENSDARG00000043404	rpp21	98	55.901	ENSPEMG00000014367	Rpp21	99	58.385	Peromyscus_maniculatus_bairdii
ENSDARG00000043404	rpp21	93	62.338	ENSPLAG00000005510	rpp21	98	62.338	Poecilia_latipinna
ENSDARG00000043404	rpp21	90	60.526	ENSPMEG00000016927	rpp21	100	60.526	Poecilia_mexicana
ENSDARG00000043404	rpp21	95	63.057	ENSPREG00000020887	rpp21	100	63.057	Poecilia_reticulata
ENSDARG00000043404	rpp21	74	64.754	ENSPPYG00000016405	RPP21	79	65.574	Pongo_abelii
ENSDARG00000043404	rpp21	74	53.793	ENSPCAG00000001248	RPP21	81	56.552	Procavia_capensis
ENSDARG00000043404	rpp21	75	63.710	ENSPCOG00000024263	RPP21	80	66.129	Propithecus_coquereli
ENSDARG00000043404	rpp21	74	51.799	ENSPVAG00000007739	RPP21	81	55.396	Pteropus_vampyrus
ENSDARG00000043404	rpp21	92	63.576	ENSPNYG00000009022	rpp21	96	63.576	Pundamilia_nyererei
ENSDARG00000043404	rpp21	90	78.667	ENSPNAG00000022186	rpp21	96	78.667	Pygocentrus_nattereri
ENSDARG00000043404	rpp21	79	68.702	ENSRNOG00000000786	Rpp21	85	70.229	Rattus_norvegicus
ENSDARG00000043404	rpp21	74	68.852	ENSSBOG00000024099	RPP21	79	68.852	Saimiri_boliviensis_boliviensis
ENSDARG00000043404	rpp21	99	67.879	ENSSFOG00015008742	rpp21	99	67.879	Scleropages_formosus
ENSDARG00000043404	rpp21	85	63.830	ENSSMAG00000016466	rpp21	98	62.987	Scophthalmus_maximus
ENSDARG00000043404	rpp21	82	68.382	ENSSDUG00000022502	-	81	68.382	Seriola_dumerili
ENSDARG00000043404	rpp21	95	62.025	ENSSLDG00000007478	-	98	62.025	Seriola_lalandi_dorsalis
ENSDARG00000043404	rpp21	74	73.770	ENSSPUG00000015130	-	96	73.770	Sphenodon_punctatus
ENSDARG00000043404	rpp21	84	65.217	ENSSPUG00000014260	-	88	65.942	Sphenodon_punctatus
ENSDARG00000043404	rpp21	81	70.149	ENSSPAG00000014089	rpp21	75	70.149	Stegastes_partitus
ENSDARG00000043404	rpp21	72	68.908	ENSSSCG00000021130	RPP21	80	67.742	Sus_scrofa
ENSDARG00000043404	rpp21	97	60.000	ENSTRUG00000023935	rpp21	84	60.000	Takifugu_rubripes
ENSDARG00000043404	rpp21	75	66.129	ENSUAMG00000007674	RPP21	84	66.129	Ursus_americanus
ENSDARG00000043404	rpp21	74	54.110	ENSVPAG00000008066	RPP21	82	54.110	Vicugna_pacos
ENSDARG00000043404	rpp21	78	77.099	ENSXETG00000026230	rpp21	84	77.099	Xenopus_tropicalis
ENSDARG00000043404	rpp21	93	62.338	ENSXCOG00000013033	rpp21	98	62.338	Xiphophorus_couchianus
ENSDARG00000043404	rpp21	93	62.987	ENSXMAG00000026619	rpp21	98	62.987	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001682	tRNA 5'-leader removal	-	IEA	Process
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	IEA	Function
GO:0005655	nucleolar ribonuclease P complex	21873635.	IBA	Component
GO:0008033	tRNA processing	21873635.	IBA	Process