EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000043453 (Gene tree)
Gene ID
192297
Gene Symbol
rps5
Alias
chunp6933|fc74e05|fj57h03|wu:fc74e05|wu:fj57h03
Full Name
ribosomal protein S5
Gene Type
protein_coding
Species
Danio_rerio
Status
confidence
Strand
Minus strand
Length
6814 bases
Position
chr15:39964943-39971756
Accession
ZDB-GENE-020419-12
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000063788Ribosomal_S7PF00177.213.1e-3611
ENSDARP00000123493Ribosomal_S7PF00177.213.1e-3611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
28381614Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transitionZGA & embryo2017 Apr 5Despic VDOI: 10.1101/gr.215954.116
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000146054-689-ENSDARP00000123493204 (aa)-Q6PC80
ENSDART00000063789-757XM_021481330ENSDARP00000063788204 (aa)XP_021337005Q6PC80
Gene Model
Click here to download ENSDARG00000043453's gene model file
Pathways
Pathway IDPathway NameSource
dre03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000043453's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000043453rps59996.535ENSG00000083845RPS59996.535Homo_sapiens
ENSDARG00000043453rps59997.015ENSAPOG00000023785rps59997.015Acanthochromis_polyacanthus
ENSDARG00000043453rps59996.535ENSAMEG00000007431RPS59996.535Ailuropoda_melanoleuca
ENSDARG00000043453rps59997.512ENSACIG00000007319rps59997.512Amphilophus_citrinellus
ENSDARG00000043453rps59997.015ENSAOCG00000010721RPS59997.015Amphiprion_ocellaris
ENSDARG00000043453rps59095.109ENSAOCG00000021297rps57995.109Amphiprion_ocellaris
ENSDARG00000043453rps59879.602ENSAPEG00000010045rps59779.602Amphiprion_percula
ENSDARG00000043453rps59997.015ENSATEG00000007911rps59997.015Anabas_testudineus
ENSDARG00000043453rps59995.522ENSACAG00000010996RPS59995.522Anolis_carolinensis
ENSDARG00000043453rps59996.535ENSANAG00000020231-9996.535Aotus_nancymaae
ENSDARG00000043453rps510093.171ENSANAG00000023153-9593.171Aotus_nancymaae
ENSDARG00000043453rps59972.906ENSANAG00000035789-9971.823Aotus_nancymaae
ENSDARG00000043453rps59997.512ENSACLG00000007312rps59997.512Astatotilapia_calliptera
ENSDARG00000043453rps59996.517ENSAMXG00000029764rps59996.517Astyanax_mexicanus
ENSDARG00000043453rps59996.535ENSBTAG00000015989RPS59996.535Bos_taurus
ENSDARG00000043453rps510081.043WBGene00004474rps-510081.043Caenorhabditis_elegans
ENSDARG00000043453rps510095.122ENSCJAG00000000304RPS59895.122Callithrix_jacchus
ENSDARG00000043453rps59996.535ENSCAFG00000002366RPS59996.535Canis_familiaris
ENSDARG00000043453rps57298.980ENSCAFG00020014527-9798.980Canis_lupus_dingo
ENSDARG00000043453rps59992.857ENSCAFG00020014863-9993.333Canis_lupus_dingo
ENSDARG00000043453rps59996.535ENSCHIG00000019536RPS59996.535Capra_hircus
ENSDARG00000043453rps56583.673ENSTSYG00000037300-9883.673Carlito_syrichta
ENSDARG00000043453rps59996.535ENSTSYG00000000076-9996.535Carlito_syrichta
ENSDARG00000043453rps59984.804ENSCAPG00000017186RPS510084.804Cavia_aperea
ENSDARG00000043453rps59996.535ENSCPOG00000023995RPS59996.535Cavia_porcellus
ENSDARG00000043453rps59882.000ENSCCAG00000036875-9382.000Cebus_capucinus
ENSDARG00000043453rps59871.000ENSCCAG00000021605-9871.000Cebus_capucinus
ENSDARG00000043453rps59996.535ENSCCAG00000020744-9996.535Cebus_capucinus
ENSDARG00000043453rps59996.535ENSCATG00000030198RPS59996.535Cercocebus_atys
ENSDARG00000043453rps510080.000ENSCATG00000040451-9480.000Cercocebus_atys
ENSDARG00000043453rps59996.535ENSCLAG00000000313RPS59996.535Chinchilla_lanigera
ENSDARG00000043453rps59996.535ENSCSAG00000001598RPS59996.535Chlorocebus_sabaeus
ENSDARG00000043453rps59874.384ENSCSAG00000009927-9874.384Chlorocebus_sabaeus
ENSDARG00000043453rps57767.296ENSCSAG00000015430-9967.296Chlorocebus_sabaeus
ENSDARG00000043453rps59996.517ENSCPBG00000013028RPS59996.517Chrysemys_picta_bellii
ENSDARG00000043453rps510087.745ENSCING00000002448-10087.745Ciona_intestinalis
ENSDARG00000043453rps510087.255ENSCSAVG00000005966-10087.255Ciona_savignyi
ENSDARG00000043453rps59996.535ENSCANG00000032591RPS59996.535Colobus_angolensis_palliatus
ENSDARG00000043453rps59771.859ENSCANG00000003782-9071.859Colobus_angolensis_palliatus
ENSDARG00000043453rps56687.234ENSCANG00000011369-8287.234Colobus_angolensis_palliatus
ENSDARG00000043453rps59869.458ENSCANG00000028788-9869.458Colobus_angolensis_palliatus
ENSDARG00000043453rps59996.040ENSCGRG00001014197Rps59996.040Cricetulus_griseus_chok1gshd
ENSDARG00000043453rps59981.683ENSCGRG00000011329Rps59981.683Cricetulus_griseus_crigri
ENSDARG00000043453rps510097.059ENSCSEG00000011153rps510097.059Cynoglossus_semilaevis
ENSDARG00000043453rps55787.179ENSCVAG00000008716rps59487.179Cyprinodon_variegatus
ENSDARG00000043453rps55096.078ENSCVAG00000023171RPS56596.078Cyprinodon_variegatus
ENSDARG00000043453rps59872.139ENSDNOG00000037158-8872.139Dasypus_novemcinctus
ENSDARG00000043453rps59996.040ENSDNOG00000047505-9996.040Dasypus_novemcinctus
ENSDARG00000043453rps59996.535ENSDORG00000002165-9996.535Dipodomys_ordii
ENSDARG00000043453rps59272.727ENSDORG00000023488-9773.232Dipodomys_ordii
ENSDARG00000043453rps59982.775FBgn0038277RpS5b9182.775Drosophila_melanogaster
ENSDARG00000043453rps59689.231FBgn0002590RpS5a8689.231Drosophila_melanogaster
ENSDARG00000043453rps59979.703ENSETEG00000013543-9979.703Echinops_telfairi
ENSDARG00000043453rps58287.647ENSEBUG00000008049-6987.647Eptatretus_burgeri
ENSDARG00000043453rps59996.535ENSEASG00005020216RPS59996.535Equus_asinus_asinus
ENSDARG00000043453rps58896.111ENSECAG00000016340RPS55296.111Equus_caballus
ENSDARG00000043453rps59996.059ENSELUG00000007527RS59996.059Esox_lucius
ENSDARG00000043453rps59994.581ENSELUG00000007427rs59896.447Esox_lucius
ENSDARG00000043453rps59996.535ENSFCAG00000027978RPS59996.535Felis_catus
ENSDARG00000043453rps59996.535ENSFDAG00000010753RPS59996.535Fukomys_damarensis
ENSDARG00000043453rps59997.015ENSFHEG00000009134rps59997.015Fundulus_heteroclitus
ENSDARG00000043453rps59996.040ENSGMOG00000015218rps59996.040Gadus_morhua
ENSDARG00000043453rps59997.512ENSGAFG00000002691rps59997.512Gambusia_affinis
ENSDARG00000043453rps59996.517ENSGACG00000002835rps59996.517Gasterosteus_aculeatus
ENSDARG00000043453rps59996.517ENSGAGG00000008180RPS59996.517Gopherus_agassizii
ENSDARG00000043453rps59996.535ENSGGOG00000004258RPS59996.535Gorilla_gorilla
ENSDARG00000043453rps59279.787ENSGGOG00000025551-9380.105Gorilla_gorilla
ENSDARG00000043453rps59977.723ENSGGOG00000026021-9881.633Gorilla_gorilla
ENSDARG00000043453rps59880.597ENSGGOG00000041414-9480.597Gorilla_gorilla
ENSDARG00000043453rps59291.005ENSGGOG00000024360-9091.005Gorilla_gorilla
ENSDARG00000043453rps56284.211ENSGGOG00000022061-9884.211Gorilla_gorilla
ENSDARG00000043453rps59965.517ENSGGOG00000022062-9965.517Gorilla_gorilla
ENSDARG00000043453rps59997.512ENSHBUG00000009305rps59997.512Haplochromis_burtoni
ENSDARG00000043453rps59996.535ENSHGLG00000007229RPS59996.535Heterocephalus_glaber_female
ENSDARG00000043453rps59996.535ENSHGLG00100013944RPS59996.535Heterocephalus_glaber_male
ENSDARG00000043453rps59997.015ENSHCOG00000007396rps59997.015Hippocampus_comes
ENSDARG00000043453rps59997.512ENSIPUG00000004835rps59997.512Ictalurus_punctatus
ENSDARG00000043453rps59996.535ENSSTOG00000005935-9996.535Ictidomys_tridecemlineatus
ENSDARG00000043453rps59578.462ENSSTOG00000029731-9278.462Ictidomys_tridecemlineatus
ENSDARG00000043453rps59996.535ENSJJAG00000002076Rps59996.535Jaculus_jaculus
ENSDARG00000043453rps59997.015ENSKMAG00000012994rps59997.015Kryptolebias_marmoratus
ENSDARG00000043453rps59997.015ENSLBEG00000007150RPS59997.015Labrus_bergylta
ENSDARG00000043453rps59990.547ENSLBEG00000019288rps59990.547Labrus_bergylta
ENSDARG00000043453rps59997.015ENSLACG00000009935RPS59997.015Latimeria_chalumnae
ENSDARG00000043453rps57258.389ENSLOCG00000000731-9958.389Lepisosteus_oculatus
ENSDARG00000043453rps59996.535ENSLAFG00000008734RPS59996.535Loxodonta_africana
ENSDARG00000043453rps59996.535ENSMFAG00000002766RPS59996.535Macaca_fascicularis
ENSDARG00000043453rps59871.642ENSMFAG00000042136-9272.362Macaca_fascicularis
ENSDARG00000043453rps59868.317ENSMFAG00000002785-9968.317Macaca_fascicularis
ENSDARG00000043453rps59970.792ENSMMUG00000018997-9870.792Macaca_mulatta
ENSDARG00000043453rps59868.317ENSMMUG00000042835-9968.317Macaca_mulatta
ENSDARG00000043453rps59996.535ENSMMUG00000008729RPS59996.535Macaca_mulatta
ENSDARG00000043453rps59996.535ENSMNEG00000039816RPS59996.535Macaca_nemestrina
ENSDARG00000043453rps59784.848ENSMNEG00000042225-9484.848Macaca_nemestrina
ENSDARG00000043453rps59772.727ENSMNEG00000031381-9072.727Macaca_nemestrina
ENSDARG00000043453rps59867.980ENSMLEG00000040248-9867.980Mandrillus_leucophaeus
ENSDARG00000043453rps510073.529ENSMLEG00000035638-10073.529Mandrillus_leucophaeus
ENSDARG00000043453rps59872.139ENSMLEG00000031826-9272.864Mandrillus_leucophaeus
ENSDARG00000043453rps59996.535ENSMLEG00000028037RPS59996.535Mandrillus_leucophaeus
ENSDARG00000043453rps59997.015ENSMAMG00000002747rps59997.015Mastacembelus_armatus
ENSDARG00000043453rps59997.512ENSMZEG00005026435rps59997.512Maylandia_zebra
ENSDARG00000043453rps59996.040ENSMAUG00000010731Rps59996.040Mesocricetus_auratus
ENSDARG00000043453rps59996.535ENSMICG00000016512RPS59996.535Microcebus_murinus
ENSDARG00000043453rps59378.836ENSMOCG00000017884-10078.836Microtus_ochrogaster
ENSDARG00000043453rps59996.040ENSMOCG00000022992-9996.040Microtus_ochrogaster
ENSDARG00000043453rps59996.517ENSMMOG00000014650rps59996.517Mola_mola
ENSDARG00000043453rps59997.015ENSMALG00000009648rps59997.015Monopterus_albus
ENSDARG00000043453rps59996.535MGP_CAROLIEiJ_G0029192Rps59996.535Mus_caroli
ENSDARG00000043453rps59996.535ENSMUSG00000012848Rps59996.535Mus_musculus
ENSDARG00000043453rps59996.535MGP_PahariEiJ_G0021054Rps59996.535Mus_pahari
ENSDARG00000043453rps59996.535MGP_SPRETEiJ_G0030268Rps59996.535Mus_spretus
ENSDARG00000043453rps58397.633ENSMPUG00000008308RPS510097.633Mustela_putorius_furo
ENSDARG00000043453rps59994.089ENSMLUG00000012641RPS59994.089Myotis_lucifugus
ENSDARG00000043453rps59996.040ENSNGAG00000015766Rps59996.040Nannospalax_galili
ENSDARG00000043453rps59997.512ENSNBRG00000018402rps59997.512Neolamprologus_brichardi
ENSDARG00000043453rps56979.221ENSNLEG00000033263-9879.221Nomascus_leucogenys
ENSDARG00000043453rps59287.831ENSNLEG00000018478-9187.831Nomascus_leucogenys
ENSDARG00000043453rps59879.602ENSNLEG00000031782-9886.111Nomascus_leucogenys
ENSDARG00000043453rps56971.795ENSNLEG00000034909-8871.795Nomascus_leucogenys
ENSDARG00000043453rps59879.602ENSNLEG00000034160-9879.602Nomascus_leucogenys
ENSDARG00000043453rps59472.775ENSMEUG00000015400-10072.775Notamacropus_eugenii
ENSDARG00000043453rps59883.582ENSODEG00000018813-9983.582Octodon_degus
ENSDARG00000043453rps59996.535ENSODEG00000000899-9996.535Octodon_degus
ENSDARG00000043453rps59997.512ENSONIG00000019659rps59997.512Oreochromis_niloticus
ENSDARG00000043453rps58397.633ENSOANG00000011921RPS510097.633Ornithorhynchus_anatinus
ENSDARG00000043453rps59996.535ENSOCUG00000024505RPS59996.535Oryctolagus_cuniculus
ENSDARG00000043453rps59997.015ENSORLG00000022059rps59997.015Oryzias_latipes
ENSDARG00000043453rps59997.015ENSORLG00020008989rps59997.015Oryzias_latipes_hni
ENSDARG00000043453rps59997.015ENSORLG00015016306rps59997.015Oryzias_latipes_hsok
ENSDARG00000043453rps59997.512ENSOMEG00000008257rps59997.512Oryzias_melastigma
ENSDARG00000043453rps59996.535ENSOGAG00000013088RPS59996.535Otolemur_garnettii
ENSDARG00000043453rps59996.535ENSOARG00000003848RPS59996.535Ovis_aries
ENSDARG00000043453rps59888.060ENSPPAG00000037203-7888.060Pan_paniscus
ENSDARG00000043453rps56284.211ENSPPAG00000041919-9884.211Pan_paniscus
ENSDARG00000043453rps59967.488ENSPPAG00000037379-9967.488Pan_paniscus
ENSDARG00000043453rps59996.535ENSPPAG00000039568RPS59996.535Pan_paniscus
ENSDARG00000043453rps59976.733ENSPPAG00000029021-9881.633Pan_paniscus
ENSDARG00000043453rps59996.535ENSPPRG00000003031RPS59996.535Panthera_pardus
ENSDARG00000043453rps59996.535ENSPTIG00000019819RPS59996.535Panthera_tigris_altaica
ENSDARG00000043453rps59875.622ENSPTRG00000045137-9881.443Pan_troglodytes
ENSDARG00000043453rps59980.693ENSPTRG00000049193-9980.693Pan_troglodytes
ENSDARG00000043453rps59967.980ENSPTRG00000051381-9967.980Pan_troglodytes
ENSDARG00000043453rps59885.075ENSPTRG00000051033-7689.796Pan_troglodytes
ENSDARG00000043453rps56284.211ENSPTRG00000045716-9884.211Pan_troglodytes
ENSDARG00000043453rps59996.535ENSPTRG00000011591RPS59996.535Pan_troglodytes
ENSDARG00000043453rps56581.443ENSPTRG00000049806-9881.443Pan_troglodytes
ENSDARG00000043453rps59986.139ENSPANG00000014392RPS510090.206Papio_anubis
ENSDARG00000043453rps59872.637ENSPANG00000029789-9273.367Papio_anubis
ENSDARG00000043453rps59997.015ENSPKIG00000011575rps59997.015Paramormyrops_kingsleyae
ENSDARG00000043453rps59997.512ENSPMGG00000000854rps59997.970Periophthalmus_magnuspinnatus
ENSDARG00000043453rps59996.040ENSPEMG00000015167Rps59996.040Peromyscus_maniculatus_bairdii
ENSDARG00000043453rps56776.923ENSPCIG00000022449-9876.923Phascolarctos_cinereus
ENSDARG00000043453rps59996.535ENSPCIG00000026774RPS59996.535Phascolarctos_cinereus
ENSDARG00000043453rps59997.512ENSPFOG00000002010rps59997.512Poecilia_formosa
ENSDARG00000043453rps59997.512ENSPLAG00000009866rps59997.512Poecilia_latipinna
ENSDARG00000043453rps59997.512ENSPMEG00000005285rps59997.512Poecilia_mexicana
ENSDARG00000043453rps59997.512ENSPREG00000001896rps58297.512Poecilia_reticulata
ENSDARG00000043453rps59996.040ENSPPYG00000010500RPS59996.040Pongo_abelii
ENSDARG00000043453rps59996.535ENSPCAG00000011034RPS59996.535Procavia_capensis
ENSDARG00000043453rps59996.535ENSPCOG00000016007RPS59996.535Propithecus_coquereli
ENSDARG00000043453rps59996.535ENSPVAG00000013966RPS59996.535Pteropus_vampyrus
ENSDARG00000043453rps59997.512ENSPNYG00000016183rps59997.512Pundamilia_nyererei
ENSDARG00000043453rps59997.015ENSPNAG00000014022rps59997.015Pygocentrus_nattereri
ENSDARG00000043453rps59996.040ENSRNOG00000019453Rps59996.040Rattus_norvegicus
ENSDARG00000043453rps59996.535ENSRBIG00000027783RPS59996.535Rhinopithecus_bieti
ENSDARG00000043453rps59867.488ENSRBIG00000031827-9867.488Rhinopithecus_bieti
ENSDARG00000043453rps59996.535ENSRROG00000036995RPS59993.333Rhinopithecus_roxellana
ENSDARG00000043453rps59868.473ENSRROG00000039369-9868.473Rhinopithecus_roxellana
ENSDARG00000043453rps59965.278YJR123WRPS59565.278Saccharomyces_cerevisiae
ENSDARG00000043453rps59996.535ENSSBOG00000030947-9996.535Saimiri_boliviensis_boliviensis
ENSDARG00000043453rps58878.889ENSSBOG00000033455-9878.889Saimiri_boliviensis_boliviensis
ENSDARG00000043453rps59996.535ENSSHAG00000000092RPS59996.535Sarcophilus_harrisii
ENSDARG00000043453rps59895.477ENSSFOG00015019773rps59995.477Scleropages_formosus
ENSDARG00000043453rps59997.015ENSSFOG00015016609rps59997.015Scleropages_formosus
ENSDARG00000043453rps59996.517ENSSMAG00000020321rps59996.517Scophthalmus_maximus
ENSDARG00000043453rps59997.015ENSSDUG00000019721rps59997.015Seriola_dumerili
ENSDARG00000043453rps59362.434ENSSLDG00000006453-9662.434Seriola_lalandi_dorsalis
ENSDARG00000043453rps59997.015ENSSLDG00000024207rps59997.015Seriola_lalandi_dorsalis
ENSDARG00000043453rps59996.535ENSSARG00000001506RPS59996.535Sorex_araneus
ENSDARG00000043453rps59996.020ENSSPUG00000014897RPS59996.020Sphenodon_punctatus
ENSDARG00000043453rps59880.000ENSSPAG00000005082rps59780.000Stegastes_partitus
ENSDARG00000043453rps59996.535ENSSSCG00000004002RPS59996.535Sus_scrofa
ENSDARG00000043453rps55094.175ENSTGUG00000015321-9894.175Taeniopygia_guttata
ENSDARG00000043453rps59996.020ENSTRUG00000023565rps59996.020Takifugu_rubripes
ENSDARG00000043453rps57393.919ENSTNIG00000001130rps59993.919Tetraodon_nigroviridis
ENSDARG00000043453rps58494.798ENSTBEG00000016955RPS59694.798Tupaia_belangeri
ENSDARG00000043453rps59986.139ENSTTRG00000001991RPS59986.139Tursiops_truncatus
ENSDARG00000043453rps59996.535ENSUAMG00000019475RPS59996.535Ursus_americanus
ENSDARG00000043453rps59996.535ENSUMAG00000003934RPS59996.535Ursus_maritimus
ENSDARG00000043453rps57295.238ENSVPAG00000000903RPS59995.238Vicugna_pacos
ENSDARG00000043453rps59996.535ENSVVUG00000002269RPS59496.535Vulpes_vulpes
ENSDARG00000043453rps59994.527ENSXETG00000020355rps59894.527Xenopus_tropicalis
ENSDARG00000043453rps59997.015ENSXCOG00000019549rps59997.015Xiphophorus_couchianus
ENSDARG00000043453rps59997.015ENSXMAG00000014201rps59997.015Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000028ribosomal small subunit assembly21873635.IBAProcess
GO:0003723RNA binding-IEAFunction
GO:0003729mRNA binding21873635.IBAFunction
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0003735structural constituent of ribosome-IEAFunction
GO:0005840ribosome-IEAComponent
GO:0006412translation21873635.IBAProcess
GO:0006412translation-IEAProcess
GO:0015935small ribosomal subunit-IEAComponent
GO:0019843rRNA binding21873635.IBAFunction
GO:0022627cytosolic small ribosomal subunit21873635.IBAComponent

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