EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000043554 (Gene tree)
Gene ID: 447873
Gene Symbol: mrpl40
Alias: fj54c06|wu:fj54c06|zgc:103495
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5762 bases
Position: chr8:2530065-2535826
Accession: ZDB-GENE-040912-37
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000063942	MRP-L28	PF09812.9	9.8e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000063943	-	883	-	ENSDARP00000063942	200 (aa)	-	Q66I86

Gene Model

Click here to download ENSDARG00000043554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000043554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000043554	mrpl40	100	45.771	ENSG00000185608	MRPL40	85	50.286	Homo_sapiens
ENSDARG00000043554	mrpl40	100	60.294	ENSAPOG00000021291	mrpl40	96	59.701	Acanthochromis_polyacanthus
ENSDARG00000043554	mrpl40	88	53.143	ENSAMEG00000011421	MRPL40	85	53.143	Ailuropoda_melanoleuca
ENSDARG00000043554	mrpl40	98	48.980	ENSACIG00000006717	MRPL40	80	53.179	Amphilophus_citrinellus
ENSDARG00000043554	mrpl40	98	60.199	ENSACIG00000006672	mrpl40	86	65.896	Amphilophus_citrinellus
ENSDARG00000043554	mrpl40	100	57.353	ENSAOCG00000003216	mrpl40	85	63.584	Amphiprion_ocellaris
ENSDARG00000043554	mrpl40	100	57.353	ENSAPEG00000017401	mrpl40	85	63.584	Amphiprion_percula
ENSDARG00000043554	mrpl40	78	64.516	ENSATEG00000020753	mrpl40	91	64.516	Anabas_testudineus
ENSDARG00000043554	mrpl40	93	50.267	ENSAPLG00000004002	MRPL40	89	53.073	Anas_platyrhynchos
ENSDARG00000043554	mrpl40	99	49.010	ENSACAG00000001053	MRPL40	88	52.273	Anolis_carolinensis
ENSDARG00000043554	mrpl40	100	48.259	ENSANAG00000026579	MRPL40	85	52.571	Aotus_nancymaae
ENSDARG00000043554	mrpl40	100	57.843	ENSACLG00000011106	mrpl40	98	58.000	Astatotilapia_calliptera
ENSDARG00000043554	mrpl40	100	64.706	ENSAMXG00000029691	mrpl40	87	70.787	Astyanax_mexicanus
ENSDARG00000043554	mrpl40	84	52.976	ENSBTAG00000019891	MRPL40	82	52.976	Bos_taurus
ENSDARG00000043554	mrpl40	75	36.129	WBGene00018793	mrpl-40	82	36.129	Caenorhabditis_elegans
ENSDARG00000043554	mrpl40	100	49.505	ENSCJAG00000001584	MRPL40	85	54.286	Callithrix_jacchus
ENSDARG00000043554	mrpl40	100	50.746	ENSCAFG00020007995	MRPL40	85	54.286	Canis_lupus_dingo
ENSDARG00000043554	mrpl40	84	53.571	ENSCHIG00000000131	-	82	53.571	Capra_hircus
ENSDARG00000043554	mrpl40	60	47.899	ENSCHIG00000026872	-	71	47.899	Capra_hircus
ENSDARG00000043554	mrpl40	100	49.254	ENSTSYG00000014747	MRPL40	87	53.714	Carlito_syrichta
ENSDARG00000043554	mrpl40	69	57.971	ENSCAPG00000012876	MRPL40	97	57.971	Cavia_aperea
ENSDARG00000043554	mrpl40	100	50.746	ENSCPOG00000026802	MRPL40	85	55.429	Cavia_porcellus
ENSDARG00000043554	mrpl40	99	48.500	ENSCCAG00000037694	MRPL40	87	52.874	Cebus_capucinus
ENSDARG00000043554	mrpl40	88	50.857	ENSCATG00000043592	-	86	50.857	Cercocebus_atys
ENSDARG00000043554	mrpl40	100	47.264	ENSCATG00000031418	-	85	51.429	Cercocebus_atys
ENSDARG00000043554	mrpl40	88	54.857	ENSCLAG00000016629	MRPL40	85	54.857	Chinchilla_lanigera
ENSDARG00000043554	mrpl40	100	47.761	ENSCSAG00000011593	MRPL40	85	52.000	Chlorocebus_sabaeus
ENSDARG00000043554	mrpl40	84	53.571	ENSCHOG00000008751	MRPL40	94	53.571	Choloepus_hoffmanni
ENSDARG00000043554	mrpl40	92	54.891	ENSCPBG00000010618	MRPL40	93	55.056	Chrysemys_picta_bellii
ENSDARG00000043554	mrpl40	64	40.945	ENSCSAVG00000001505	-	63	40.945	Ciona_savignyi
ENSDARG00000043554	mrpl40	88	52.000	ENSCANG00000038600	MRPL40	93	52.000	Colobus_angolensis_palliatus
ENSDARG00000043554	mrpl40	88	52.571	ENSCGRG00001019957	Mrpl40	85	52.571	Cricetulus_griseus_chok1gshd
ENSDARG00000043554	mrpl40	88	52.571	ENSCGRG00000001245	Mrpl40	85	52.571	Cricetulus_griseus_crigri
ENSDARG00000043554	mrpl40	98	55.500	ENSCSEG00000019750	mrpl40	86	60.227	Cynoglossus_semilaevis
ENSDARG00000043554	mrpl40	88	38.764	ENSCSEG00000012296	-	86	42.038	Cynoglossus_semilaevis
ENSDARG00000043554	mrpl40	98	59.184	ENSCVAG00000018229	mrpl40	84	65.698	Cyprinodon_variegatus
ENSDARG00000043554	mrpl40	87	48.851	ENSDNOG00000038360	-	84	48.851	Dasypus_novemcinctus
ENSDARG00000043554	mrpl40	100	51.244	ENSDORG00000002949	Mrpl40	85	55.429	Dipodomys_ordii
ENSDARG00000043554	mrpl40	77	39.375	FBgn0037892	mRpL40	82	39.375	Drosophila_melanogaster
ENSDARG00000043554	mrpl40	88	53.143	ENSEASG00005010493	MRPL40	85	53.143	Equus_asinus_asinus
ENSDARG00000043554	mrpl40	80	55.000	ENSECAG00000009876	MRPL40	96	55.000	Equus_caballus
ENSDARG00000043554	mrpl40	100	50.746	ENSEEUG00000009268	MRPL40	85	55.429	Erinaceus_europaeus
ENSDARG00000043554	mrpl40	100	62.255	ENSELUG00000009281	mrpl40	83	70.000	Esox_lucius
ENSDARG00000043554	mrpl40	100	50.249	ENSFCAG00000002752	MRPL40	85	54.286	Felis_catus
ENSDARG00000043554	mrpl40	89	50.282	ENSFALG00000007981	MRPL40	89	51.977	Ficedula_albicollis
ENSDARG00000043554	mrpl40	79	52.229	ENSFDAG00000020940	MRPL40	97	52.229	Fukomys_damarensis
ENSDARG00000043554	mrpl40	98	51.531	ENSGALG00000053063	MRPL40	57	52.023	Gallus_gallus
ENSDARG00000043554	mrpl40	100	58.454	ENSGAFG00000000522	mrpl40	85	65.896	Gambusia_affinis
ENSDARG00000043554	mrpl40	89	55.618	ENSGAGG00000020728	MRPL40	86	55.618	Gopherus_agassizii
ENSDARG00000043554	mrpl40	100	45.771	ENSGGOG00000012336	MRPL40	85	50.286	Gorilla_gorilla
ENSDARG00000043554	mrpl40	100	58.128	ENSHBUG00000000404	mrpl40	85	64.162	Haplochromis_burtoni
ENSDARG00000043554	mrpl40	79	56.051	ENSHGLG00000018525	MRPL40	97	56.051	Heterocephalus_glaber_female
ENSDARG00000043554	mrpl40	100	48.259	ENSHGLG00100009563	MRPL40	85	52.571	Heterocephalus_glaber_male
ENSDARG00000043554	mrpl40	100	58.621	ENSHCOG00000005731	mrpl40	85	63.584	Hippocampus_comes
ENSDARG00000043554	mrpl40	100	62.136	ENSIPUG00000020288	Mrpl40	97	61.650	Ictalurus_punctatus
ENSDARG00000043554	mrpl40	88	55.429	ENSSTOG00000002887	MRPL40	86	55.429	Ictidomys_tridecemlineatus
ENSDARG00000043554	mrpl40	100	50.746	ENSJJAG00000017905	Mrpl40	86	54.857	Jaculus_jaculus
ENSDARG00000043554	mrpl40	100	56.098	ENSKMAG00000003717	mrpl40	85	63.006	Kryptolebias_marmoratus
ENSDARG00000043554	mrpl40	98	53.571	ENSLBEG00000025203	mrpl40	94	57.062	Labrus_bergylta
ENSDARG00000043554	mrpl40	88	57.062	ENSLACG00000015070	MRPL40	87	57.062	Latimeria_chalumnae
ENSDARG00000043554	mrpl40	100	57.843	ENSLOCG00000001879	mrpl40	87	64.045	Lepisosteus_oculatus
ENSDARG00000043554	mrpl40	100	50.249	ENSLAFG00000011061	MRPL40	85	54.286	Loxodonta_africana
ENSDARG00000043554	mrpl40	84	51.786	ENSMFAG00000039890	-	89	51.786	Macaca_fascicularis
ENSDARG00000043554	mrpl40	88	50.286	ENSMFAG00000001495	-	86	50.286	Macaca_fascicularis
ENSDARG00000043554	mrpl40	100	47.264	ENSMFAG00000032018	-	85	51.429	Macaca_fascicularis
ENSDARG00000043554	mrpl40	88	50.286	ENSMMUG00000030886	-	85	50.286	Macaca_mulatta
ENSDARG00000043554	mrpl40	84	51.786	ENSMMUG00000006218	-	93	51.786	Macaca_mulatta
ENSDARG00000043554	mrpl40	100	46.766	ENSMNEG00000034050	-	85	50.857	Macaca_nemestrina
ENSDARG00000043554	mrpl40	72	51.389	ENSMNEG00000040492	-	78	51.389	Macaca_nemestrina
ENSDARG00000043554	mrpl40	88	51.429	ENSMNEG00000041171	-	88	51.429	Macaca_nemestrina
ENSDARG00000043554	mrpl40	88	50.857	ENSMLEG00000032552	-	86	50.857	Mandrillus_leucophaeus
ENSDARG00000043554	mrpl40	88	52.000	ENSMLEG00000030926	-	93	52.000	Mandrillus_leucophaeus
ENSDARG00000043554	mrpl40	84	51.190	ENSMLEG00000009022	-	89	51.190	Mandrillus_leucophaeus
ENSDARG00000043554	mrpl40	98	59.184	ENSMAMG00000014249	mrpl40	98	58.000	Mastacembelus_armatus
ENSDARG00000043554	mrpl40	100	57.843	ENSMZEG00005009853	mrpl40	98	58.000	Maylandia_zebra
ENSDARG00000043554	mrpl40	78	54.487	ENSMGAG00000001177	MRPL40	100	54.487	Meleagris_gallopavo
ENSDARG00000043554	mrpl40	88	53.714	ENSMAUG00000015350	Mrpl40	85	53.714	Mesocricetus_auratus
ENSDARG00000043554	mrpl40	100	49.254	ENSMICG00000046066	MRPL40	85	53.143	Microcebus_murinus
ENSDARG00000043554	mrpl40	89	52.542	ENSMOCG00000016970	Mrpl40	86	52.542	Microtus_ochrogaster
ENSDARG00000043554	mrpl40	78	67.097	ENSMMOG00000012861	mrpl40	84	67.097	Mola_mola
ENSDARG00000043554	mrpl40	91	53.297	ENSMODG00000010070	MRPL40	96	54.286	Monodelphis_domestica
ENSDARG00000043554	mrpl40	86	65.698	ENSMALG00000020778	mrpl40	84	65.698	Monopterus_albus
ENSDARG00000043554	mrpl40	88	56.000	MGP_CAROLIEiJ_G0020557	Mrpl40	97	57.962	Mus_caroli
ENSDARG00000043554	mrpl40	88	56.571	ENSMUSG00000022706	Mrpl40	97	58.599	Mus_musculus
ENSDARG00000043554	mrpl40	88	56.000	MGP_PahariEiJ_G0016262	Mrpl40	97	57.325	Mus_pahari
ENSDARG00000043554	mrpl40	100	51.741	MGP_SPRETEiJ_G0021452	Mrpl40	97	57.962	Mus_spretus
ENSDARG00000043554	mrpl40	88	53.714	ENSMPUG00000003865	MRPL40	85	53.714	Mustela_putorius_furo
ENSDARG00000043554	mrpl40	100	51.232	ENSMLUG00000002456	-	85	54.857	Myotis_lucifugus
ENSDARG00000043554	mrpl40	100	51.232	ENSMLUG00000024620	-	85	54.857	Myotis_lucifugus
ENSDARG00000043554	mrpl40	88	55.429	ENSNGAG00000000304	Mrpl40	86	55.429	Nannospalax_galili
ENSDARG00000043554	mrpl40	100	44.776	ENSNLEG00000005372	MRPL40	85	49.143	Nomascus_leucogenys
ENSDARG00000043554	mrpl40	88	53.143	ENSODEG00000017051	MRPL40	85	53.143	Octodon_degus
ENSDARG00000043554	mrpl40	100	57.353	ENSONIG00000014393	mrpl40	98	57.500	Oreochromis_niloticus
ENSDARG00000043554	mrpl40	88	54.286	ENSOCUG00000009859	MRPL40	63	54.286	Oryctolagus_cuniculus
ENSDARG00000043554	mrpl40	100	57.073	ENSORLG00000002574	mrpl40	94	59.551	Oryzias_latipes
ENSDARG00000043554	mrpl40	100	57.073	ENSORLG00020005727	mrpl40	81	65.060	Oryzias_latipes_hni
ENSDARG00000043554	mrpl40	100	56.098	ENSORLG00015015422	mrpl40	81	63.855	Oryzias_latipes_hsok
ENSDARG00000043554	mrpl40	100	56.373	ENSOMEG00000017632	mrpl40	81	65.663	Oryzias_melastigma
ENSDARG00000043554	mrpl40	89	55.367	ENSOGAG00000030071	MRPL40	94	55.367	Otolemur_garnettii
ENSDARG00000043554	mrpl40	84	52.381	ENSOARG00000017561	MRPL40	81	52.381	Ovis_aries
ENSDARG00000043554	mrpl40	100	46.269	ENSPPAG00000030349	MRPL40	86	50.282	Pan_paniscus
ENSDARG00000043554	mrpl40	88	53.143	ENSPPRG00000004672	MRPL40	85	53.143	Panthera_pardus
ENSDARG00000043554	mrpl40	88	53.143	ENSPTIG00000003393	MRPL40	85	53.143	Panthera_tigris_altaica
ENSDARG00000043554	mrpl40	100	46.269	ENSPTRG00000014061	MRPL40	86	50.282	Pan_troglodytes
ENSDARG00000043554	mrpl40	88	51.429	ENSPANG00000000595	-	86	51.429	Papio_anubis
ENSDARG00000043554	mrpl40	100	47.264	ENSPANG00000007370	-	85	51.429	Papio_anubis
ENSDARG00000043554	mrpl40	98	56.500	ENSPKIG00000024494	mrpl40	86	61.714	Paramormyrops_kingsleyae
ENSDARG00000043554	mrpl40	83	53.939	ENSPSIG00000003055	MRPL40	99	53.939	Pelodiscus_sinensis
ENSDARG00000043554	mrpl40	88	60.000	ENSPMGG00000018388	mrpl40	91	58.857	Periophthalmus_magnuspinnatus
ENSDARG00000043554	mrpl40	100	49.261	ENSPEMG00000017933	Mrpl40	85	53.143	Peromyscus_maniculatus_bairdii
ENSDARG00000043554	mrpl40	98	45.408	ENSPCIG00000025479	MRPL40	85	48.000	Phascolarctos_cinereus
ENSDARG00000043554	mrpl40	100	56.667	ENSPFOG00000012506	mrpl40	83	63.636	Poecilia_formosa
ENSDARG00000043554	mrpl40	100	57.005	ENSPLAG00000017335	mrpl40	85	64.162	Poecilia_latipinna
ENSDARG00000043554	mrpl40	100	57.488	ENSPMEG00000003881	mrpl40	85	64.740	Poecilia_mexicana
ENSDARG00000043554	mrpl40	100	57.971	ENSPREG00000011448	mrpl40	85	65.318	Poecilia_reticulata
ENSDARG00000043554	mrpl40	88	50.857	ENSPPYG00000011578	MRPL40	93	50.857	Pongo_abelii
ENSDARG00000043554	mrpl40	88	44.000	ENSPCAG00000007834	MRPL40	86	44.000	Procavia_capensis
ENSDARG00000043554	mrpl40	100	49.254	ENSPCOG00000014413	MRPL40	85	53.143	Propithecus_coquereli
ENSDARG00000043554	mrpl40	100	57.843	ENSPNYG00000008216	mrpl40	98	58.000	Pundamilia_nyererei
ENSDARG00000043554	mrpl40	100	67.000	ENSPNAG00000000310	mrpl40	99	70.323	Pygocentrus_nattereri
ENSDARG00000043554	mrpl40	88	56.571	ENSRNOG00000049686	Mrpl40	85	56.571	Rattus_norvegicus
ENSDARG00000043554	mrpl40	100	46.766	ENSRBIG00000023060	MRPL40	85	52.000	Rhinopithecus_bieti
ENSDARG00000043554	mrpl40	100	46.269	ENSRROG00000043837	MRPL40	85	51.429	Rhinopithecus_roxellana
ENSDARG00000043554	mrpl40	100	48.756	ENSSBOG00000031050	MRPL40	86	52.542	Saimiri_boliviensis_boliviensis
ENSDARG00000043554	mrpl40	79	51.899	ENSSHAG00000010239	MRPL40	98	51.899	Sarcophilus_harrisii
ENSDARG00000043554	mrpl40	95	63.212	ENSSFOG00015014220	mrpl40	89	66.286	Scleropages_formosus
ENSDARG00000043554	mrpl40	100	56.796	ENSSMAG00000006340	mrpl40	98	55.825	Scophthalmus_maximus
ENSDARG00000043554	mrpl40	100	55.340	ENSSDUG00000022994	mrpl40	86	61.932	Seriola_dumerili
ENSDARG00000043554	mrpl40	100	55.340	ENSSLDG00000009671	mrpl40	86	61.932	Seriola_lalandi_dorsalis
ENSDARG00000043554	mrpl40	100	49.254	ENSSARG00000003051	MRPL40	85	53.143	Sorex_araneus
ENSDARG00000043554	mrpl40	99	54.271	ENSSPUG00000015559	MRPL40	87	58.960	Sphenodon_punctatus
ENSDARG00000043554	mrpl40	97	58.586	ENSSPAG00000015481	mrpl40	96	58.163	Stegastes_partitus
ENSDARG00000043554	mrpl40	88	53.714	ENSSSCG00000034014	MRPL40	85	53.714	Sus_scrofa
ENSDARG00000043554	mrpl40	62	54.032	ENSTGUG00000008534	MRPL40	98	54.967	Taeniopygia_guttata
ENSDARG00000043554	mrpl40	94	60.104	ENSTRUG00000025904	mrpl40	85	65.698	Takifugu_rubripes
ENSDARG00000043554	mrpl40	88	52.000	ENSTTRG00000014932	MRPL40	86	52.000	Tursiops_truncatus
ENSDARG00000043554	mrpl40	88	54.286	ENSUAMG00000007667	MRPL40	85	54.286	Ursus_americanus
ENSDARG00000043554	mrpl40	82	52.147	ENSUMAG00000006804	MRPL40	86	52.147	Ursus_maritimus
ENSDARG00000043554	mrpl40	88	46.023	ENSVVUG00000020719	-	83	46.023	Vulpes_vulpes
ENSDARG00000043554	mrpl40	100	50.746	ENSVVUG00000025360	-	85	54.857	Vulpes_vulpes
ENSDARG00000043554	mrpl40	100	49.000	ENSXETG00000018600	mrpl40	89	52.514	Xenopus_tropicalis
ENSDARG00000043554	mrpl40	100	58.454	ENSXCOG00000002135	mrpl40	85	65.896	Xiphophorus_couchianus
ENSDARG00000043554	mrpl40	100	57.971	ENSXMAG00000014595	mrpl40	85	65.318	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005761	mitochondrial ribosome	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	IEA	Component
GO:0008150	biological_process	-	ND	Process