EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000043976 (Gene tree)
Gene ID: 266989
Gene Symbol: etf1b
Alias: eRF1|etID39694.10|etf1|hm:zeh0057|wu:fa19e07|wu:fi31f01|zeh0057
Full Name: eukaryotic translation termination factor 1b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 10083 bases
Position: chr10:21434649-21444731
Accession: ZDB-GENE-021029-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000064557	eRF1_2	PF03464.15	1.5e-46	1	1
ENSDARP00000146923	eRF1_2	PF03464.15	1.5e-46	1	1
ENSDARP00000064557	eRF1_3	PF03465.15	6.1e-39	1	1
ENSDARP00000146923	eRF1_3	PF03465.15	6.1e-39	1	1
ENSDARP00000064557	eRF1_1	PF03463.15	5.4e-20	1	1
ENSDARP00000146923	eRF1_1	PF03463.15	5.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135577	-	737	-	-	- (aa)	-	-
ENSDART00000147181	-	841	-	-	- (aa)	-	-
ENSDART00000142447	-	845	-	-	- (aa)	-	-
ENSDART00000146857	-	756	-	-	- (aa)	-	-
ENSDART00000193938	-	4258	-	ENSDARP00000146923	442 (aa)	-	Q803E5
ENSDART00000064558	-	3005	XM_021479101	ENSDARP00000064557	442 (aa)	XP_021334776	Q803E5

Gene Model

Click here to download ENSDARG00000043976's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000043976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000043976	etf1b	93	87.943	ENSDARG00000105210	etf1a	97	89.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000043976	etf1b	100	96.154	ENSG00000120705	ETF1	100	100.000	Homo_sapiens
ENSDARG00000043976	etf1b	100	97.743	ENSAPOG00000004622	etf1a	100	97.743	Acanthochromis_polyacanthus
ENSDARG00000043976	etf1b	100	95.023	ENSAMEG00000016547	ETF1	97	95.128	Ailuropoda_melanoleuca
ENSDARG00000043976	etf1b	100	97.285	ENSACIG00000014875	etf1a	100	97.285	Amphilophus_citrinellus
ENSDARG00000043976	etf1b	100	97.743	ENSAOCG00000015573	etf1a	100	97.743	Amphiprion_ocellaris
ENSDARG00000043976	etf1b	100	97.743	ENSAPEG00000015124	etf1a	100	97.743	Amphiprion_percula
ENSDARG00000043976	etf1b	100	97.743	ENSATEG00000009599	etf1a	100	97.743	Anabas_testudineus
ENSDARG00000043976	etf1b	93	95.884	ENSAPLG00000009740	ETF1	99	95.884	Anas_platyrhynchos
ENSDARG00000043976	etf1b	100	96.380	ENSACAG00000015818	ETF1	100	96.380	Anolis_carolinensis
ENSDARG00000043976	etf1b	99	72.109	ENSANAG00000021905	-	97	71.694	Aotus_nancymaae
ENSDARG00000043976	etf1b	100	87.104	ENSANAG00000014418	-	97	87.007	Aotus_nancymaae
ENSDARG00000043976	etf1b	100	96.154	ENSANAG00000025638	-	100	96.154	Aotus_nancymaae
ENSDARG00000043976	etf1b	100	78.959	ENSANAG00000023525	-	97	78.886	Aotus_nancymaae
ENSDARG00000043976	etf1b	100	97.968	ENSACLG00000010368	etf1a	100	97.968