EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000044093 (Gene tree)
Gene ID
560828
Gene Symbol
rpl13a
Alias
fd05d08|hm:zehp0384|wu:fa95e06|wu:fb08g07|wu:fd05d08
Full Name
ribosomal protein L13a
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
3189 bases
Position
chr17:24615091-24618279
Accession
ZDB-GENE-030131-168
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000064738Ribosomal_L13PF00572.181.1e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000134571-581--- (aa)--
ENSDART00000064739-1123-ENSDARP00000064738205 (aa)-Q1LYB7
ENSDART00000141942-918--- (aa)--
ENSDART00000134680-831--- (aa)--
ENSDART00000132299-371--- (aa)--
ENSDART00000145980-905--- (aa)--
Gene Model
Click here to download ENSDARG00000044093's gene model file
Pathways
Pathway IDPathway NameSource
dre03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000044093's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000044093rpl13a9787.940ENSG00000142541RPL13A10087.324Homo_sapiens
ENSDARG00000044093rpl13a10093.659ENSAPOG00000014084rpl13a10093.659Acanthochromis_polyacanthus
ENSDARG00000044093rpl13a9887.500ENSAMEG00000014027RPL13A9987.500Ailuropoda_melanoleuca
ENSDARG00000044093rpl13a9790.909ENSACIG00000004871rpl13a9990.909Amphilophus_citrinellus
ENSDARG00000044093rpl13a10093.171ENSAOCG00000002123rpl13a10093.171Amphiprion_ocellaris
ENSDARG00000044093rpl13a10093.171ENSAPEG00000018777rpl13a10093.171Amphiprion_percula
ENSDARG00000044093rpl13a10094.634ENSATEG00000012828rpl13a10094.634Anabas_testudineus
ENSDARG00000044093rpl13a9790.452ENSACAG00000017279RPL13A9890.452Anolis_carolinensis
ENSDARG00000044093rpl13a9773.869ENSANAG00000021423-9873.869Aotus_nancymaae
ENSDARG00000044093rpl13a6972.297ENSANAG00000037443-10072.297Aotus_nancymaae
ENSDARG00000044093rpl13a9787.940ENSANAG00000030530RPL13A9887.940Aotus_nancymaae
ENSDARG00000044093rpl13a6985.915ENSANAG00000013769-10085.915Aotus_nancymaae
ENSDARG00000044093rpl13a9775.500ENSANAG00000020868-9875.500Aotus_nancymaae
ENSDARG00000044093rpl13a10091.707ENSACLG00000016552rpl13a10091.707Astatotilapia_calliptera
ENSDARG00000044093rpl13a10090.732ENSAMXG00000033532rpl13a10090.732Astyanax_mexicanus
ENSDARG00000044093rpl13a9886.000ENSBTAG00000005296RPL13A9986.000Bos_taurus
ENSDARG00000044093rpl13a9654.822WBGene00004428rpl-169754.822Caenorhabditis_elegans
ENSDARG00000044093rpl13a8175.000ENSCJAG00000008837-9875.000Callithrix_jacchus
ENSDARG00000044093rpl13a9786.432ENSCJAG00000040678-9886.432Callithrix_jacchus
ENSDARG00000044093rpl13a9781.910ENSCJAG00000046649-9881.910Callithrix_jacchus
ENSDARG00000044093rpl13a9787.940ENSCJAG00000000072-9887.940Callithrix_jacchus
ENSDARG00000044093rpl13a9755.556ENSCAFG00000003946-9655.556Canis_familiaris
ENSDARG00000044093rpl13a9887.500ENSCAFG00000029892RPL13A9987.500Canis_familiaris
ENSDARG00000044093rpl13a9887.500ENSCAFG00020024917-9987.500Canis_lupus_dingo
ENSDARG00000044093rpl13a9882.000ENSCHIG00000012581-9882.000Capra_hircus
ENSDARG00000044093rpl13a9886.000ENSCHIG00000021732-9986.869Capra_hircus
ENSDARG00000044093rpl13a9887.000ENSTSYG00000008791-9987.000Carlito_syrichta
ENSDARG00000044093rpl13a8570.115ENSTSYG00000028115-9668.000Carlito_syrichta
ENSDARG00000044093rpl13a9788.384ENSCAPG00000007267RPL13A9988.384Cavia_aperea
ENSDARG00000044093rpl13a6194.400ENSCPOG00000023083-5990.977Cavia_porcellus
ENSDARG00000044093rpl13a9887.500ENSCPOG00000012417RPL13A9987.500Cavia_porcellus
ENSDARG00000044093rpl13a9787.940ENSCCAG00000022898RPL13A9887.940Cebus_capucinus
ENSDARG00000044093rpl13a6685.185ENSCCAG00000020555-9785.185Cebus_capucinus
ENSDARG00000044093rpl13a6691.852ENSCCAG00000029220-9391.852Cebus_capucinus
ENSDARG00000044093rpl13a9384.817ENSCCAG00000034479-9584.817Cebus_capucinus
ENSDARG00000044093rpl13a9787.940ENSCATG00000011576RPL13A9887.940Cercocebus_atys
ENSDARG00000044093rpl13a9886.500ENSCLAG00000012323RPL13A9986.500Chinchilla_lanigera
ENSDARG00000044093rpl13a9786.432ENSCSAG00000019054-9886.432Chlorocebus_sabaeus
ENSDARG00000044093rpl13a9790.909ENSCPBG00000014922RPL13A9390.909Chrysemys_picta_bellii
ENSDARG00000044093rpl13a9965.517ENSCING00000014892-9965.517Ciona_intestinalis
ENSDARG00000044093rpl13a9964.039ENSCSAVG00000000666-9964.039Ciona_savignyi
ENSDARG00000044093rpl13a9786.935ENSCANG00000000304-9886.935Colobus_angolensis_palliatus
ENSDARG00000044093rpl13a7879.012ENSCANG00000018732-9879.012Colobus_angolensis_palliatus
ENSDARG00000044093rpl13a9787.940ENSCANG00000040885-9887.940Colobus_angolensis_palliatus
ENSDARG00000044093rpl13a9885.500ENSCGRG00001018651-9985.500Cricetulus_griseus_chok1gshd
ENSDARG00000044093rpl13a9885.500ENSCGRG00000005890-9985.500Cricetulus_griseus_crigri
ENSDARG00000044093rpl13a9883.000ENSCSEG00000002640rpl13a9783.000Cynoglossus_semilaevis
ENSDARG00000044093rpl13a10082.439ENSCVAG00000011043rpl13a10082.439Cyprinodon_variegatus
ENSDARG00000044093rpl13a9887.000ENSDNOG00000035370-9987.000Dasypus_novemcinctus
ENSDARG00000044093rpl13a9886.000ENSDORG00000012194-9986.000Dipodomys_ordii
ENSDARG00000044093rpl13a9956.436FBgn0037351RpL13A9956.436Drosophila_melanogaster
ENSDARG00000044093rpl13a9771.357ENSETEG00000017076-9871.357Echinops_telfairi
ENSDARG00000044093rpl13a9784.422ENSETEG00000005732-9884.422Echinops_telfairi
ENSDARG00000044093rpl13a10069.268ENSEBUG00000007234rpl13a10069.268Eptatretus_burgeri
ENSDARG00000044093rpl13a9787.879ENSEASG00005005007RPL13A8687.879Equus_asinus_asinus
ENSDARG00000044093rpl13a9887.000ENSECAG00000015832RPL13A9987.879Equus_caballus
ENSDARG00000044093rpl13a7486.093ENSEEUG00000014071RPL13A7486.093Erinaceus_europaeus
ENSDARG00000044093rpl13a10091.220ENSELUG00000014577rpl13a10091.220Esox_lucius
ENSDARG00000044093rpl13a9787.437ENSFCAG00000009194RPL13A9887.437Felis_catus
ENSDARG00000044093rpl13a9887.000ENSFDAG00000016892RPL13A9987.000Fukomys_damarensis
ENSDARG00000044093rpl13a10094.146ENSFHEG00000004165rpl13a10094.146Fundulus_heteroclitus
ENSDARG00000044093rpl13a9791.960ENSGMOG00000010791rpl13a9391.960Gadus_morhua
ENSDARG00000044093rpl13a10093.171ENSGAFG00000007578rpl13a10093.171Gambusia_affinis
ENSDARG00000044093rpl13a9892.537ENSGACG00000009310rpl13a10092.537Gasterosteus_aculeatus
ENSDARG00000044093rpl13a9383.854ENSGAGG00000002437RPL13A7483.854Gopherus_agassizii
ENSDARG00000044093rpl13a6686.667ENSGGOG00000039250-8286.667Gorilla_gorilla
ENSDARG00000044093rpl13a9786.935ENSGGOG00000023324-9886.935Gorilla_gorilla
ENSDARG00000044093rpl13a6488.636ENSGGOG00000039904-7088.636Gorilla_gorilla
ENSDARG00000044093rpl13a9787.940ENSGGOG00000002932RPL13A9887.940Gorilla_gorilla
ENSDARG00000044093rpl13a10091.707ENSHBUG00000023575rpl13a10091.707Haplochromis_burtoni
ENSDARG00000044093rpl13a9887.000ENSHGLG00000010070RPL13A10087.437Heterocephalus_glaber_female
ENSDARG00000044093rpl13a9887.000ENSHGLG00100010359RPL13A9987.000Heterocephalus_glaber_male
ENSDARG00000044093rpl13a10091.707ENSHCOG00000007902rpl13a10091.707Hippocampus_comes
ENSDARG00000044093rpl13a9792.462ENSIPUG00000014098rpl13a9492.462Ictalurus_punctatus
ENSDARG00000044093rpl13a9787.374ENSSTOG00000021558RPL13A9987.374Ictidomys_tridecemlineatus
ENSDARG00000044093rpl13a9886.500ENSJJAG00000000343-9986.500Jaculus_jaculus
ENSDARG00000044093rpl13a10092.195ENSKMAG00000009039rpl13a10092.195Kryptolebias_marmoratus
ENSDARG00000044093rpl13a10093.659ENSLBEG00000005434rpl13a10093.659Labrus_bergylta
ENSDARG00000044093rpl13a9684.925ENSLACG00000019092RPL13A9784.577Latimeria_chalumnae
ENSDARG00000044093rpl13a10092.683ENSLOCG00000004388rpl13a10092.683Lepisosteus_oculatus
ENSDARG00000044093rpl13a9887.500ENSLAFG00000016213RPL13A9987.500Loxodonta_africana
ENSDARG00000044093rpl13a9787.940ENSMFAG00000001097-10087.324Macaca_fascicularis
ENSDARG00000044093rpl13a9780.882ENSMFAG00000002765-9880.882Macaca_fascicularis
ENSDARG00000044093rpl13a9778.392ENSMFAG00000003121-9878.894Macaca_fascicularis
ENSDARG00000044093rpl13a9788.384ENSMMUG00000007551RPL13A9987.940Macaca_mulatta
ENSDARG00000044093rpl13a9780.882ENSMMUG00000009018-9880.882Macaca_mulatta
ENSDARG00000044093rpl13a9787.940ENSMNEG00000034977RPL13A9887.940Macaca_nemestrina
ENSDARG00000044093rpl13a5693.860ENSMLEG00000038132-9793.860Mandrillus_leucophaeus
ENSDARG00000044093rpl13a10092.195ENSMAMG00000007425rpl13a8692.195Mastacembelus_armatus
ENSDARG00000044093rpl13a10091.707ENSMZEG00005004952rpl13a10091.707Maylandia_zebra
ENSDARG00000044093rpl13a9774.874ENSMAUG00000012558-9874.874Mesocricetus_auratus
ENSDARG00000044093rpl13a9681.218ENSMAUG00000020351-9781.218Mesocricetus_auratus
ENSDARG00000044093rpl13a9984.653ENSMAUG00000016402-10084.653Mesocricetus_auratus
ENSDARG00000044093rpl13a9074.054ENSMICG00000043457-9674.054Microcebus_murinus
ENSDARG00000044093rpl13a9887.500ENSMICG00000009318-9987.500Microcebus_murinus
ENSDARG00000044093rpl13a10069.756ENSMOCG00000016427-10069.756Microtus_ochrogaster
ENSDARG00000044093rpl13a9885.500ENSMOCG00000002774-9985.500Microtus_ochrogaster
ENSDARG00000044093rpl13a9791.457ENSMMOG00000010248rpl13a9891.457Mola_mola
ENSDARG00000044093rpl13a10093.171ENSMALG00000012804rpl13a10093.171Monopterus_albus
ENSDARG00000044093rpl13a9886.000MGP_CAROLIEiJ_G0029698-9986.000Mus_caroli
ENSDARG00000044093rpl13a9885.500ENSMUSG00000074129Rpl13a9985.500Mus_musculus
ENSDARG00000044093rpl13a9886.000MGP_PahariEiJ_G0012923-9986.000Mus_pahari
ENSDARG00000044093rpl13a9882.500MGP_SPRETEiJ_G0017763-9982.500Mus_spretus
ENSDARG00000044093rpl13a9885.500MGP_SPRETEiJ_G0030796Rpl13a9985.500Mus_spretus
ENSDARG00000044093rpl13a9887.500ENSMPUG00000002604RPL13A9987.500Mustela_putorius_furo
ENSDARG00000044093rpl13a9886.567ENSMLUG00000004945RPL13A9986.567Myotis_lucifugus
ENSDARG00000044093rpl13a9886.500ENSNGAG00000021984-9987.374Nannospalax_galili
ENSDARG00000044093rpl13a10091.707ENSNBRG00000024166rpl13a10091.707Neolamprologus_brichardi
ENSDARG00000044093rpl13a9780.198ENSNLEG00000005211RPL13A9880.198Nomascus_leucogenys
ENSDARG00000044093rpl13a9781.910ENSNLEG00000012957-9681.910Nomascus_leucogenys
ENSDARG00000044093rpl13a9685.279ENSNLEG00000033213-9885.279Nomascus_leucogenys
ENSDARG00000044093rpl13a8478.488ENSMEUG00000005199RPL13A9978.488Notamacropus_eugenii
ENSDARG00000044093rpl13a10080.488ENSOPRG00000001194RPL13A10080.488Ochotona_princeps
ENSDARG00000044093rpl13a9885.500ENSODEG00000020233-9985.500Octodon_degus
ENSDARG00000044093rpl13a9886.000ENSODEG00000019218-9986.000Octodon_degus
ENSDARG00000044093rpl13a9887.000ENSODEG00000016831-9987.000Octodon_degus
ENSDARG00000044093rpl13a9886.500ENSODEG00000020468-9986.500Octodon_degus
ENSDARG00000044093rpl13a10091.220ENSONIG00000003560rpl13a10091.220Oreochromis_niloticus
ENSDARG00000044093rpl13a9888.000ENSOANG00000000828RPL13A9988.000Ornithorhynchus_anatinus
ENSDARG00000044093rpl13a7578.571ENSOCUG00000026592-9678.571Oryctolagus_cuniculus
ENSDARG00000044093rpl13a10091.707ENSORLG00000014599rpl13a9091.707Oryzias_latipes
ENSDARG00000044093rpl13a10091.707ENSORLG00020013090rpl13a9091.707Oryzias_latipes_hni
ENSDARG00000044093rpl13a10091.707ENSORLG00015011634rpl13a9791.000Oryzias_latipes_hsok
ENSDARG00000044093rpl13a10092.683ENSOMEG00000010232rpl13a9092.683Oryzias_melastigma
ENSDARG00000044093rpl13a9881.000ENSOGAG00000026177-9981.000Otolemur_garnettii
ENSDARG00000044093rpl13a9784.500ENSOGAG00000030280-9884.500Otolemur_garnettii
ENSDARG00000044093rpl13a9887.000ENSOGAG00000004625-9987.000Otolemur_garnettii
ENSDARG00000044093rpl13a9885.000ENSOARG00000020159-9985.000Ovis_aries
ENSDARG00000044093rpl13a9886.500ENSOARG00000013169-9886.500Ovis_aries
ENSDARG00000044093rpl13a9470.466ENSOARG00000017798-9570.466Ovis_aries
ENSDARG00000044093rpl13a9785.930ENSPPAG00000023659-9885.930Pan_paniscus
ENSDARG00000044093rpl13a9787.940ENSPPAG00000037365RPL13A9887.940Pan_paniscus
ENSDARG00000044093rpl13a6488.636ENSPPAG00000006023-6988.636Pan_paniscus
ENSDARG00000044093rpl13a9783.417ENSPPAG00000019107-9883.417Pan_paniscus
ENSDARG00000044093rpl13a9787.437ENSPPRG00000011265RPL13A10086.620Panthera_pardus
ENSDARG00000044093rpl13a9787.940ENSPTRG00000011298RPL13A9887.940Pan_troglodytes
ENSDARG00000044093rpl13a9783.417ENSPTRG00000049426-9883.417Pan_troglodytes
ENSDARG00000044093rpl13a6986.620ENSPTRG00000042978-10086.620Pan_troglodytes
ENSDARG00000044093rpl13a9786.935ENSPTRG00000050666-9886.935Pan_troglodytes
ENSDARG00000044093rpl13a6593.233ENSPTRG00000052284-9193.233Pan_troglodytes
ENSDARG00000044093rpl13a9887.500ENSPANG00000012050RPL13A9987.500Papio_anubis
ENSDARG00000044093rpl13a10090.244ENSPKIG00000000720rpl13a10090.244Paramormyrops_kingsleyae
ENSDARG00000044093rpl13a9790.452ENSPSIG00000018234RPL13A10090.452Pelodiscus_sinensis
ENSDARG00000044093rpl13a9792.462ENSPMGG00000010552rpl13a9692.462Periophthalmus_magnuspinnatus
ENSDARG00000044093rpl13a9885.500ENSPEMG00000009221-9985.500Peromyscus_maniculatus_bairdii
ENSDARG00000044093rpl13a10087.805ENSPMAG00000006362rpl13a10087.805Petromyzon_marinus
ENSDARG00000044093rpl13a8272.189ENSPCIG00000014063-9072.189Phascolarctos_cinereus
ENSDARG00000044093rpl13a10087.805ENSPCIG00000007340-9988.945Phascolarctos_cinereus
ENSDARG00000044093rpl13a10093.171ENSPFOG00000013546rpl13a10093.171Poecilia_formosa
ENSDARG00000044093rpl13a10093.171ENSPLAG00000016066rpl13a10093.171Poecilia_latipinna
ENSDARG00000044093rpl13a10093.171ENSPMEG00000018384rpl13a10093.171Poecilia_mexicana
ENSDARG00000044093rpl13a10093.171ENSPREG00000020079rpl13a10093.171Poecilia_reticulata
ENSDARG00000044093rpl13a9787.940ENSPPYG00000006798-9887.940Pongo_abelii
ENSDARG00000044093rpl13a9787.940ENSPPYG00000010251-9887.940Pongo_abelii
ENSDARG00000044093rpl13a9888.000ENSPCAG00000004086RPL13A9988.000Procavia_capensis
ENSDARG00000044093rpl13a9887.500ENSPCOG00000023898RPL13A9988.442Propithecus_coquereli
ENSDARG00000044093rpl13a9474.611ENSPCOG00000016293-9374.611Propithecus_coquereli
ENSDARG00000044093rpl13a9887.500ENSPVAG00000010958RPL13A9987.500Pteropus_vampyrus
ENSDARG00000044093rpl13a10091.707ENSPNYG00000019779rpl13a10091.707Pundamilia_nyererei
ENSDARG00000044093rpl13a9991.176ENSPNAG00000026887rpl13a9991.176Pygocentrus_nattereri
ENSDARG00000044093rpl13a9885.500ENSRNOG00000062298Rpl13a9985.500Rattus_norvegicus
ENSDARG00000044093rpl13a9786.935ENSRBIG00000044737RPL13A9886.935Rhinopithecus_bieti
ENSDARG00000044093rpl13a9787.940ENSRROG00000042976-9887.940Rhinopithecus_roxellana
ENSDARG00000044093rpl13a9781.910ENSRROG00000036041-9881.910Rhinopithecus_roxellana
ENSDARG00000044093rpl13a6484.848ENSRROG00000028369-6684.848Rhinopithecus_roxellana
ENSDARG00000044093rpl13a9657.868YIL133CRPL16A9657.868Saccharomyces_cerevisiae
ENSDARG00000044093rpl13a9155.729YNL069CRPL16B9755.729Saccharomyces_cerevisiae
ENSDARG00000044093rpl13a9787.437ENSSBOG00000028481RPL13A10087.437Saimiri_boliviensis_boliviensis
ENSDARG00000044093rpl13a9770.833ENSSBOG00000024635-9870.833Saimiri_boliviensis_boliviensis
ENSDARG00000044093rpl13a10090.732ENSSFOG00015001972rpl13a10090.732Scleropages_formosus
ENSDARG00000044093rpl13a10093.659ENSSDUG00000017181rpl13a10093.659Seriola_dumerili
ENSDARG00000044093rpl13a8260.119ENSSLDG00000007920-9556.684Seriola_lalandi_dorsalis
ENSDARG00000044093rpl13a10093.659ENSSLDG00000002561rpl13a10093.659Seriola_lalandi_dorsalis
ENSDARG00000044093rpl13a9887.000ENSSSCG00000034448-9887.000Sus_scrofa
ENSDARG00000044093rpl13a9468.229ENSSSCG00000031204-9272.674Sus_scrofa
ENSDARG00000044093rpl13a10092.683ENSTRUG00000023611rpl13a10092.683Takifugu_rubripes
ENSDARG00000044093rpl13a9886.500ENSTTRG00000005485RPL13A9986.500Tursiops_truncatus
ENSDARG00000044093rpl13a9887.500ENSUAMG00000008438RPL13A9987.500Ursus_americanus
ENSDARG00000044093rpl13a9887.500ENSUMAG00000002385RPL13A9987.500Ursus_maritimus
ENSDARG00000044093rpl13a9784.848ENSVPAG00000006564RPL13A10084.848Vicugna_pacos
ENSDARG00000044093rpl13a9887.500ENSVVUG00000022597RPL13A9987.500Vulpes_vulpes
ENSDARG00000044093rpl13a9790.955ENSXETG00000014144rpl13a8690.955Xenopus_tropicalis
ENSDARG00000044093rpl13a10094.146ENSXCOG00000004826rpl13a10094.146Xiphophorus_couchianus
ENSDARG00000044093rpl13a10094.146ENSXMAG00000027604rpl13a10094.146Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003729mRNA binding21873635.IBAFunction
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0003735structural constituent of ribosome-IEAFunction
GO:0005840ribosome21873635.IBAComponent
GO:0005840ribosome-IEAComponent
GO:0006412translation-IEAProcess
GO:0015934large ribosomal subunit-IEAComponent
GO:0017148negative regulation of translation21873635.IBAProcess
GO:0022625cytosolic large ribosomal subunit21873635.IBAComponent

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