EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000044255 (Gene tree)
Gene ID: 393766
Gene Symbol: rbm18
Alias: zgc:73332
Full Name: RNA binding motif protein 18
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 24562 bases
Position: chr10:9346383-9370944
Accession: ZDB-GENE-040426-1764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000123321	RRM_1	PF00076.22	1.7e-16	1	1
ENSDARP00000064974	RRM_1	PF00076.22	4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000141869	-	775	XM_005155615	ENSDARP00000123321	127 (aa)	XP_005155672	E9QCC8
ENSDART00000141243	-	797	-	-	- (aa)	-	-
ENSDART00000064975	-	1576	-	ENSDARP00000064974	188 (aa)	-	Q6PBM8

Gene Model

Click here to download ENSDARG00000044255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000044255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000044255	rbm18	79	89.000	ENSG00000119446	RBM18	95	71.196	Homo_sapiens
ENSDARG00000044255	rbm18	100	76.733	ENSAPOG00000001987	rbm18	100	76.733	Acanthochromis_polyacanthus
ENSDARG00000044255	rbm18	79	88.000	ENSAMEG00000000772	RBM18	95	70.652	Ailuropoda_melanoleuca
ENSDARG00000044255	rbm18	84	90.654	ENSACIG00000005001	rbm18	99	75.758	Amphilophus_citrinellus
ENSDARG00000044255	rbm18	100	77.114	ENSAOCG00000006762	rbm18	100	77.114	Amphiprion_ocellaris
ENSDARG00000044255	rbm18	100	77.114	ENSAPEG00000007972	rbm18	100	77.114	Amphiprion_percula
ENSDARG00000044255	rbm18	100	76.617	ENSATEG00000019164	rbm18	100	76.617	Anabas_testudineus
ENSDARG00000044255	rbm18	79	89.000	ENSANAG00000035441	RBM18	95	71.196	Aotus_nancymaae
ENSDARG00000044255	rbm18	96	79.787	ENSACLG00000019848	rbm18	93	79.787	Astatotilapia_calliptera
ENSDARG00000044255	rbm18	100	89.947	ENSAMXG00000035574	rbm18	100	89.947	Astyanax_mexicanus
ENSDARG00000044255	rbm18	96	70.109	ENSBTAG00000016367	RBM18	95	70.109	Bos_taurus
ENSDARG00000044255	rbm18	79	89.000	ENSCJAG00000046355	RBM18	95	71.196	Callithrix_jacchus
ENSDARG00000044255	rbm18	79	88.000	ENSCAFG00000030041	RBM18	95	70.652	Canis_familiaris
ENSDARG00000044255	rbm18	79	88.000	ENSCAFG00020015174	RBM18	95	70.652	Canis_lupus_dingo
ENSDARG00000044255	rbm18	96	70.109	ENSCHIG00000026444	RBM18	95	70.109	Capra_hircus
ENSDARG00000044255	rbm18	79	89.000	ENSTSYG00000030353	RBM18	95	71.196	Carlito_syrichta
ENSDARG00000044255	rbm18	96	71.196	ENSCPOG00000038004	RBM18	95	71.196	Cavia_porcellus
ENSDARG00000044255	rbm18	79	89.000	ENSCCAG00000035467	RBM18	95	71.196	Cebus_capucinus
ENSDARG00000044255	rbm18	79	89.000	ENSCATG00000035634	RBM18	95	71.196	Cercocebus_atys
ENSDARG00000044255	rbm18	89	80.531	ENSCLAG00000010773	RBM18	95	71.196	Chinchilla_lanigera
ENSDARG00000044255	rbm18	94	77.686	ENSCSAG00000013373	RBM18	82	80.833	Chlorocebus_sabaeus
ENSDARG00000044255	rbm18	81	68.387	ENSCHOG00000001341	RBM18	100	68.387	Choloepus_hoffmanni
ENSDARG00000044255	rbm18	88	82.143	ENSCPBG00000009885	RBM18	94	72.826	Chrysemys_picta_bellii
ENSDARG00000044255	rbm18	97	37.500	ENSCING00000010157	-	95	37.838	Ciona_intestinalis
ENSDARG00000044255	rbm18	54	40.000	ENSCSAVG00000000409	-	80	40.000	Ciona_savignyi
ENSDARG00000044255	rbm18	88	82.143	ENSCANG00000029590	RBM18	95	71.739	Colobus_angolensis_palliatus
ENSDARG00000044255	rbm18	79	89.000	ENSCGRG00001014593	Rbm18	95	71.196	Cricetulus_griseus_chok1gshd
ENSDARG00000044255	rbm18	87	70.659	ENSCGRG00000012247	Rbm18	93	70.659	Cricetulus_griseus_crigri
ENSDARG00000044255	rbm18	100	75.622	ENSCSEG00000017587	rbm18	100	75.622	Cynoglossus_semilaevis
ENSDARG00000044255	rbm18	100	77.612	ENSCVAG00000012436	rbm18	87	77.612	Cyprinodon_variegatus
ENSDARG00000044255	rbm18	100	68.912	ENSDNOG00000031658	RBM18	100	68.912	Dasypus_novemcinctus
ENSDARG00000044255	rbm18	79	89.000	ENSDORG00000028540	Rbm18	95	71.196	Dipodomys_ordii
ENSDARG00000044255	rbm18	89	35.294	FBgn0030571	CG14414	99	34.286	Drosophila_melanogaster
ENSDARG00000044255	rbm18	79	89.000	ENSETEG00000009832	RBM18	95	63.934	Echinops_telfairi
ENSDARG00000044255	rbm18	77	70.408	ENSEBUG00000009127	rbm18	78	60.526	Eptatretus_burgeri
ENSDARG00000044255	rbm18	79	88.000	ENSEASG00005021084	RBM18	95	70.652	Equus_asinus_asinus
ENSDARG00000044255	rbm18	79	88.000	ENSECAG00000024639	RBM18	95	70.652	Equus_caballus
ENSDARG00000044255	rbm18	96	56.522	ENSEEUG00000002828	RBM18	95	56.522	Erinaceus_europaeus
ENSDARG00000044255	rbm18	98	82.796	ENSELUG00000005876	rbm18	96	81.868	Esox_lucius
ENSDARG00000044255	rbm18	79	88.000	ENSFCAG00000037774	RBM18	95	70.652	Felis_catus
ENSDARG00000044255	rbm18	81	69.677	ENSFALG00000001940	RBM18	96	69.677	Ficedula_albicollis
ENSDARG00000044255	rbm18	96	71.196	ENSFDAG00000012679	RBM18	95	71.196	Fukomys_damarensis
ENSDARG00000044255	rbm18	99	76.617	ENSFHEG00000012457	rbm18	99	76.617	Fundulus_heteroclitus
ENSDARG00000044255	rbm18	100	69.802	ENSGMOG00000019735	rbm18	100	69.802	Gadus_morhua
ENSDARG00000044255	rbm18	91	80.000	ENSGALG00000028167	RBM18	95	70.652	Gallus_gallus
ENSDARG00000044255	rbm18	100	78.109	ENSGAFG00000007767	rbm18	100	78.109	Gambusia_affinis
ENSDARG00000044255	rbm18	100	74.877	ENSGACG00000017348	rbm18	99	74.877	Gasterosteus_aculeatus
ENSDARG00000044255	rbm18	88	82.143	ENSGAGG00000018318	RBM18	94	72.283	Gopherus_agassizii
ENSDARG00000044255	rbm18	79	89.000	ENSGGOG00000011052	RBM18	95	71.196	Gorilla_gorilla
ENSDARG00000044255	rbm18	96	79.787	ENSHBUG00000015237	rbm18	93	79.787	Haplochromis_burtoni
ENSDARG00000044255	rbm18	96	71.196	ENSHGLG00000011073	RBM18	95	71.196	Heterocephalus_glaber_female
ENSDARG00000044255	rbm18	93	57.062	ENSHGLG00100006247	-	90	57.062	Heterocephalus_glaber_male
ENSDARG00000044255	rbm18	96	71.196	ENSHGLG00100005536	RBM18	95	71.196	Heterocephalus_glaber_male
ENSDARG00000044255	rbm18	100	75.879	ENSHCOG00000003148	rbm18	100	75.879	Hippocampus_comes
ENSDARG00000044255	rbm18	100	85.185	ENSIPUG00000021512	rbm18	83	85.185	Ictalurus_punctatus
ENSDARG00000044255	rbm18	79	81.000	ENSSTOG00000032266	-	88	67.683	Ictidomys_tridecemlineatus
ENSDARG00000044255	rbm18	79	89.000	ENSSTOG00000022388	-	95	71.196	Ictidomys_tridecemlineatus
ENSDARG00000044255	rbm18	96	69.022	ENSJJAG00000010974	-	95	69.022	Jaculus_jaculus
ENSDARG00000044255	rbm18	94	77.686	ENSJJAG00000009581	-	75	80.833	Jaculus_jaculus
ENSDARG00000044255	rbm18	100	76.355	ENSKMAG00000010679	rbm18	86	76.355	Kryptolebias_marmoratus
ENSDARG00000044255	rbm18	100	74.877	ENSLBEG00000023896	rbm18	100	74.877	Labrus_bergylta
ENSDARG00000044255	rbm18	84	85.321	ENSLACG00000009920	RBM18	99	76.429	Latimeria_chalumnae
ENSDARG00000044255	rbm18	79	89.000	ENSLAFG00000012134	RBM18	95	70.652	Loxodonta_africana
ENSDARG00000044255	rbm18	79	89.000	ENSMFAG00000000443	RBM18	95	71.196	Macaca_fascicularis
ENSDARG00000044255	rbm18	79	89.000	ENSMMUG00000011455	RBM18	95	71.196	Macaca_mulatta
ENSDARG00000044255	rbm18	79	89.000	ENSMNEG00000035374	RBM18	95	71.196	Macaca_nemestrina
ENSDARG00000044255	rbm18	79	89.000	ENSMLEG00000043105	RBM18	95	71.196	Mandrillus_leucophaeus
ENSDARG00000044255	rbm18	100	76.119	ENSMAMG00000009239	rbm18	100	76.119	Mastacembelus_armatus
ENSDARG00000044255	rbm18	96	80.645	ENSMZEG00005017921	rbm18	93	80.645	Maylandia_zebra
ENSDARG00000044255	rbm18	94	64.088	ENSMGAG00000016888	RBM18	100	64.088	Meleagris_gallopavo
ENSDARG00000044255	rbm18	79	89.000	ENSMAUG00000021365	Rbm18	95	71.196	Mesocricetus_auratus
ENSDARG00000044255	rbm18	79	89.000	ENSMICG00000046793	RBM18	95	70.652	Microcebus_murinus
ENSDARG00000044255	rbm18	84	83.486	ENSMOCG00000000613	Rbm18	95	71.196	Microtus_ochrogaster
ENSDARG00000044255	rbm18	85	87.037	ENSMMOG00000021319	rbm18	100	70.051	Mola_mola
ENSDARG00000044255	rbm18	81	69.677	ENSMODG00000019688	RBM18	100	69.677	Monodelphis_domestica
ENSDARG00000044255	rbm18	100	74.877	ENSMALG00000017766	rbm18	100	74.877	Monopterus_albus
ENSDARG00000044255	rbm18	100	68.912	MGP_CAROLIEiJ_G0023488	Rbm18	100	68.912	Mus_caroli
ENSDARG00000044255	rbm18	100	68.912	ENSMUSG00000026889	Rbm18	100	68.912	Mus_musculus
ENSDARG00000044255	rbm18	88	82.143	MGP_PahariEiJ_G0024945	Rbm18	95	70.652	Mus_pahari
ENSDARG00000044255	rbm18	100	68.912	MGP_SPRETEiJ_G0024405	Rbm18	100	68.912	Mus_spretus
ENSDARG00000044255	rbm18	79	88.000	ENSMPUG00000007246	RBM18	95	70.652	Mustela_putorius_furo
ENSDARG00000044255	rbm18	79	88.000	ENSMLUG00000013224	-	95	70.652	Myotis_lucifugus
ENSDARG00000044255	rbm18	79	88.000	ENSMLUG00000004794	-	95	70.652	Myotis_lucifugus
ENSDARG00000044255	rbm18	79	89.000	ENSNGAG00000000041	Rbm18	95	71.196	Nannospalax_galili
ENSDARG00000044255	rbm18	96	79.787	ENSNBRG00000021128	rbm18	93	79.787	Neolamprologus_brichardi
ENSDARG00000044255	rbm18	79	89.000	ENSNLEG00000017174	RBM18	95	71.196	Nomascus_leucogenys
ENSDARG00000044255	rbm18	96	57.377	ENSMEUG00000015704	RBM18	95	57.377	Notamacropus_eugenii
ENSDARG00000044255	rbm18	79	89.000	ENSOPRG00000010381	RBM18	95	71.196	Ochotona_princeps
ENSDARG00000044255	rbm18	96	71.196	ENSODEG00000002055	RBM18	95	71.196	Octodon_degus
ENSDARG00000044255	rbm18	96	80.645	ENSONIG00000003723	rbm18	93	80.645	Oreochromis_niloticus
ENSDARG00000044255	rbm18	100	68.394	ENSOANG00000008200	RBM18	100	68.394	Ornithorhynchus_anatinus
ENSDARG00000044255	rbm18	79	88.000	ENSOCUG00000008527	RBM18	95	70.652	Oryctolagus_cuniculus
ENSDARG00000044255	rbm18	84	87.850	ENSORLG00000009962	rbm18	100	74.752	Oryzias_latipes
ENSDARG00000044255	rbm18	84	87.850	ENSORLG00020013452	rbm18	100	74.020	Oryzias_latipes_hni
ENSDARG00000044255	rbm18	85	87.037	ENSORLG00015001711	rbm18	97	75.510	Oryzias_latipes_hsok
ENSDARG00000044255	rbm18	84	88.785	ENSOMEG00000001492	rbm18	100	75.248	Oryzias_melastigma
ENSDARG00000044255	rbm18	79	89.000	ENSOGAG00000015104	RBM18	95	71.196	Otolemur_garnettii
ENSDARG00000044255	rbm18	96	70.109	ENSOARG00000014228	RBM18	95	70.109	Ovis_aries
ENSDARG00000044255	rbm18	79	89.000	ENSPPAG00000023355	RBM18	95	71.196	Pan_paniscus
ENSDARG00000044255	rbm18	79	88.000	ENSPPRG00000011360	RBM18	95	70.652	Panthera_pardus
ENSDARG00000044255	rbm18	79	88.000	ENSPTIG00000007126	RBM18	95	70.652	Panthera_tigris_altaica
ENSDARG00000044255	rbm18	79	89.000	ENSPTRG00000021323	RBM18	95	71.196	Pan_troglodytes
ENSDARG00000044255	rbm18	79	89.000	ENSPANG00000025845	RBM18	95	71.196	Papio_anubis
ENSDARG00000044255	rbm18	83	92.381	ENSPKIG00000005430	rbm18	81	82.517	Paramormyrops_kingsleyae
ENSDARG00000044255	rbm18	88	82.143	ENSPSIG00000013631	RBM18	95	72.826	Pelodiscus_sinensis
ENSDARG00000044255	rbm18	97	76.316	ENSPMGG00000023951	rbm18	96	76.316	Periophthalmus_magnuspinnatus
ENSDARG00000044255	rbm18	87	66.071	ENSPMAG00000000630	rbm18	96	65.432	Petromyzon_marinus
ENSDARG00000044255	rbm18	79	89.000	ENSPCIG00000025526	RBM18	95	71.739	Phascolarctos_cinereus
ENSDARG00000044255	rbm18	100	78.109	ENSPFOG00000019706	rbm18	100	78.109	Poecilia_formosa
ENSDARG00000044255	rbm18	100	78.109	ENSPLAG00000005571	rbm18	100	78.109	Poecilia_latipinna
ENSDARG00000044255	rbm18	100	78.109	ENSPMEG00000013977	rbm18	100	78.109	Poecilia_mexicana
ENSDARG00000044255	rbm18	100	78.109	ENSPREG00000009157	rbm18	100	78.109	Poecilia_reticulata
ENSDARG00000044255	rbm18	79	89.000	ENSPPYG00000019569	RBM18	95	71.196	Pongo_abelii
ENSDARG00000044255	rbm18	94	77.686	ENSPCAG00000011245	RBM18	88	80.833	Procavia_capensis
ENSDARG00000044255	rbm18	79	89.000	ENSPCOG00000024474	RBM18	95	71.196	Propithecus_coquereli
ENSDARG00000044255	rbm18	79	88.000	ENSPVAG00000000863	RBM18	95	70.652	Pteropus_vampyrus
ENSDARG00000044255	rbm18	94	82.353	ENSPNYG00000012421	rbm18	93	79.787	Pundamilia_nyererei
ENSDARG00000044255	rbm18	100	91.005	ENSPNAG00000017660	rbm18	100	91.005	Pygocentrus_nattereri
ENSDARG00000044255	rbm18	88	81.250	ENSRNOG00000006763	Rbm18	95	70.652	Rattus_norvegicus
ENSDARG00000044255	rbm18	88	82.143	ENSRBIG00000040177	RBM18	95	71.739	Rhinopithecus_bieti
ENSDARG00000044255	rbm18	88	82.143	ENSRROG00000031364	RBM18	95	71.739	Rhinopithecus_roxellana
ENSDARG00000044255	rbm18	79	89.000	ENSSBOG00000024806	RBM18	95	71.196	Saimiri_boliviensis_boliviensis
ENSDARG00000044255	rbm18	79	89.000	ENSSHAG00000012257	RBM18	95	71.739	Sarcophilus_harrisii
ENSDARG00000044255	rbm18	100	82.723	ENSSFOG00015001100	rbm18	100	82.723	Scleropages_formosus
ENSDARG00000044255	rbm18	100	75.862	ENSSMAG00000020138	rbm18	100	75.862	Scophthalmus_maximus
ENSDARG00000044255	rbm18	100	77.612	ENSSDUG00000016203	rbm18	98	77.612	Seriola_dumerili
ENSDARG00000044255	rbm18	100	77.612	ENSSLDG00000016329	rbm18	100	77.612	Seriola_lalandi_dorsalis
ENSDARG00000044255	rbm18	81	68.387	ENSSPUG00000001601	RBM18	87	68.387	Sphenodon_punctatus
ENSDARG00000044255	rbm18	100	77.114	ENSSPAG00000005394	rbm18	100	77.114	Stegastes_partitus
ENSDARG00000044255	rbm18	96	70.109	ENSSSCG00000030089	RBM18	95	70.109	Sus_scrofa
ENSDARG00000044255	rbm18	81	69.032	ENSTGUG00000006802	RBM18	99	69.032	Taeniopygia_guttata
ENSDARG00000044255	rbm18	100	73.000	ENSTRUG00000005812	rbm18	100	73.000	Takifugu_rubripes
ENSDARG00000044255	rbm18	99	75.648	ENSTNIG00000009141	rbm18	98	75.648	Tetraodon_nigroviridis
ENSDARG00000044255	rbm18	81	69.032	ENSTBEG00000016520	RBM18	100	69.032	Tupaia_belangeri
ENSDARG00000044255	rbm18	79	88.000	ENSUAMG00000014431	RBM18	95	70.652	Ursus_americanus
ENSDARG00000044255	rbm18	79	88.000	ENSUMAG00000003445	RBM18	95	70.652	Ursus_maritimus
ENSDARG00000044255	rbm18	79	88.000	ENSVPAG00000008618	RBM18	95	70.652	Vicugna_pacos
ENSDARG00000044255	rbm18	79	88.000	ENSVVUG00000009442	RBM18	95	70.652	Vulpes_vulpes
ENSDARG00000044255	rbm18	79	88.000	ENSXETG00000016328	rbm18	95	66.848	Xenopus_tropicalis
ENSDARG00000044255	rbm18	100	78.109	ENSXMAG00000003538	rbm18	100	78.109	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component