EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000044457 (Gene tree)
Gene ID: 798697
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 3432 bases
Position: chr6:29004062-29007493
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000065138	zf-C2H2	PF00096.26	2.1e-25	1	6
ENSDARP00000065138	zf-C2H2	PF00096.26	2.1e-25	2	6
ENSDARP00000065138	zf-C2H2	PF00096.26	2.1e-25	3	6
ENSDARP00000065138	zf-C2H2	PF00096.26	2.1e-25	4	6
ENSDARP00000065138	zf-C2H2	PF00096.26	2.1e-25	5	6
ENSDARP00000065138	zf-C2H2	PF00096.26	2.1e-25	6	6
ENSDARP00000065138	zf-met	PF12874.7	9.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000065139	-	1228	-	ENSDARP00000065138	396 (aa)	-	F1QKD4

Gene Model

Click here to download ENSDARG00000044457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000044457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000044457	gfi1ab	100	65.414	ENSDARG00000020746	gfi1aa	100	65.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000044457	gfi1ab	100	64.019	ENSG00000162676	GFI1	100	64.019	Homo_sapiens
ENSDARG00000044457	gfi1ab	100	72.932	ENSAPOG00000015189	gfi1ab	100	72.932	Acanthochromis_polyacanthus
ENSDARG00000044457	gfi1ab	100	71.250	ENSACIG00000016354	gfi1ab	100	71.250	Amphilophus_citrinellus
ENSDARG00000044457	gfi1ab	100	50.117	ENSAOCG00000008339	gfi1ab	100	52.068	Amphiprion_ocellaris
ENSDARG00000044457	gfi1ab	100	73.434	ENSAPEG00000023870	gfi1ab	100	73.434	Amphiprion_percula
ENSDARG00000044457	gfi1ab	100	69.173	ENSATEG00000009167	gfi1ab	89	69.173	Anabas_testudineus
ENSDARG00000044457	gfi1ab	85	67.507	ENSAPLG00000015700	GFI1	99	67.507	Anas_platyrhynchos
ENSDARG00000044457	gfi1ab	100	66.344	ENSACAG00000004498	GFI1	100	66.586	Anolis_carolinensis
ENSDARG00000044457	gfi1ab	100	64.720	ENSANAG00000019656	GFI1	100	64.720	Aotus_nancymaae
ENSDARG00000044457	gfi1ab	100	72.250	ENSACLG00000026458	gfi1ab	93	72.250	Astatotilapia_calliptera
ENSDARG00000044457	gfi1ab	100	53.788	ENSAMXG00000006669	GFI1	100	53.788	Astyanax_mexicanus
ENSDARG00000044457	gfi1ab	100	72.319	ENSAMXG00000039600	gfi1ab	100	72.319	Astyanax_mexicanus
ENSDARG00000044457	gfi1ab	50	58.081	ENSAMXG00000015228	-	62	58.081	Astyanax_mexicanus
ENSDARG00000044457	gfi1ab	100	62.989	ENSBTAG00000016723	GFI1	100	64.789	Bos_taurus
ENSDARG00000044457	gfi1ab	100	63.889	ENSCJAG00000017609	GFI1	100	64.252	Callithrix_jacchus
ENSDARG00000044457	gfi1ab	100	64.486	ENSCAFG00000020155	GFI1	100	64.486	Canis_familiaris
ENSDARG00000044457	gfi1ab	100	64.486	ENSCAFG00020013371	GFI1	88	64.486	Canis_lupus_dingo
ENSDARG00000044457	gfi1ab	100	63.218	ENSCHIG00000016135	GFI1	100	65.023	Capra_hircus
ENSDARG00000044457	gfi1ab	100	63.850	ENSCPOG00000011727	GFI1	100	63.850	Cavia_porcellus
ENSDARG00000044457	gfi1ab	100	64.486	ENSCCAG00000036072	GFI1	100	64.486	Cebus_capucinus
ENSDARG00000044457	gfi1ab	100	64.019	ENSCATG00000037873	GFI1	100	64.019	Cercocebus_atys
ENSDARG00000044457	gfi1ab	100	66.339	ENSCLAG00000005915	GFI1	100	61.086	Chinchilla_lanigera
ENSDARG00000044457	gfi1ab	98	58.378	ENSCSAG00000001469	GFI1	100	58.378	Chlorocebus_sabaeus
ENSDARG00000044457	gfi1ab	100	63.785	ENSCANG00000034077	GFI1	100	63.785	Colobus_angolensis_palliatus
ENSDARG00000044457	gfi1ab	100	62.383	ENSCGRG00001015432	Gfi1	100	62.383	Cricetulus_griseus_chok1gshd
ENSDARG00000044457	gfi1ab	100	66.667	ENSCSEG00000017729	GFI1	100	66.667	Cynoglossus_semilaevis
ENSDARG00000044457	gfi1ab	100	62.195	ENSCVAG00000004930	GFI1	100	63.835	Cyprinodon_variegatus
ENSDARG00000044457	gfi1ab	100	68.500	ENSCVAG00000011828	gfi1ab	100	68.250	Cyprinodon_variegatus
ENSDARG00000044457	gfi1ab	100	62.329	ENSDNOG00000000782	GFI1	97	63.636	Dasypus_novemcinctus
ENSDARG00000044457	gfi1ab	100	79.144	ENSEBUG00000008075	gfi1ab	100	79.144	Eptatretus_burgeri
ENSDARG00000044457	gfi1ab	100	64.871	ENSEASG00005015509	GFI1	86	64.871	Equus_asinus_asinus
ENSDARG00000044457	gfi1ab	91	56.599	ENSECAG00000006647	GFI1	92	56.599	Equus_caballus
ENSDARG00000044457	gfi1ab	100	63.208	ENSEEUG00000000198	GFI1	100	63.679	Erinaceus_europaeus
ENSDARG00000044457	gfi1ab	100	75.186	ENSELUG00000003015	gfi1ab	99	74.938	Esox_lucius
ENSDARG00000044457	gfi1ab	100	67.250	ENSELUG00000019033	GFI1	100	67.250	Esox_lucius
ENSDARG00000044457	gfi1ab	100	64.486	ENSFCAG00000005914	GFI1	100	64.486	Felis_catus
ENSDARG00000044457	gfi1ab	100	60.671	ENSFHEG00000000341	GFI1	100	63.793	Fundulus_heteroclitus
ENSDARG00000044457	gfi1ab	100	68.500	ENSFHEG00000010997	gfi1ab	100	68.500	Fundulus_heteroclitus
ENSDARG00000044457	gfi1ab	100	68.421	ENSGMOG00000007737	gfi1ab	100	68.421	Gadus_morhua
ENSDARG00000044457	gfi1ab	100	66.993	ENSGALG00000043650	GFI1	100	66.993	Gallus_gallus
ENSDARG00000044457	gfi1ab	100	62.408	ENSGAFG00000018063	GFI1	100	62.408	Gambusia_affinis
ENSDARG00000044457	gfi1ab	100	70.149	ENSGAFG00000016637	gfi1ab	100	70.149	Gambusia_affinis
ENSDARG00000044457	gfi1ab	100	70.677	ENSGACG00000004257	gfi1ab	97	70.677	Gasterosteus_aculeatus
ENSDARG00000044457	gfi1ab	100	64.019	ENSGGOG00000005320	GFI1	100	64.019	Gorilla_gorilla
ENSDARG00000044457	gfi1ab	100	71.429	ENSHBUG00000011969	gfi1ab	100	71.429	Haplochromis_burtoni
ENSDARG00000044457	gfi1ab	100	64.336	ENSHGLG00000008020	GFI1	100	64.319	Heterocephalus_glaber_female
ENSDARG00000044457	gfi1ab	100	64.336	ENSHGLG00100000610	GFI1	100	64.319	Heterocephalus_glaber_male
ENSDARG00000044457	gfi1ab	100	64.214	ENSHCOG00000019555	GFI1	99	64.626	Hippocampus_comes
ENSDARG00000044457	gfi1ab	100	58.685	ENSHCOG00000008590	gfi1ab	100	57.075	Hippocampus_comes
ENSDARG00000044457	gfi1ab	100	73.300	ENSIPUG00000010071	gfi1ab	87	73.300	Ictalurus_punctatus
ENSDARG00000044457	gfi1ab	100	62.843	ENSIPUG00000013414	GFI1	100	62.843	Ictalurus_punctatus
ENSDARG00000044457	gfi1ab	100	62.929	ENSSTOG00000014583	GFI1	100	64.269	Ictidomys_tridecemlineatus
ENSDARG00000044457	gfi1ab	100	68.514	ENSKMAG00000003810	gfi1ab	100	68.514	Kryptolebias_marmoratus
ENSDARG00000044457	gfi1ab	100	71.859	ENSLBEG00000027776	gfi1ab	100	72.111	Labrus_bergylta
ENSDARG00000044457	gfi1ab	100	70.896	ENSLACG00000013362	GFI1	98	70.398	Latimeria_chalumnae
ENSDARG00000044457	gfi1ab	99	74.731	ENSLACG00000017590	-	57	74.731	Latimeria_chalumnae
ENSDARG00000044457	gfi1ab	100	75.628	ENSLOCG00000004711	gfi1ab	100	75.628	Lepisosteus_oculatus
ENSDARG00000044457	gfi1ab	100	64.524	ENSLAFG00000018346	GFI1	100	64.524	Loxodonta_africana
ENSDARG00000044457	gfi1ab	100	64.019	ENSMFAG00000045801	GFI1	100	64.019	Macaca_fascicularis
ENSDARG00000044457	gfi1ab	100	64.019	ENSMNEG00000036338	GFI1	100	64.019	Macaca_nemestrina
ENSDARG00000044457	gfi1ab	100	64.019	ENSMLEG00000036181	GFI1	100	64.019	Mandrillus_leucophaeus
ENSDARG00000044457	gfi1ab	100	71.608	ENSMAMG00000008125	gfi1ab	100	71.608	Mastacembelus_armatus
ENSDARG00000044457	gfi1ab	100	72.000	ENSMZEG00005009895	gfi1ab	100	72.000	Maylandia_zebra
ENSDARG00000044457	gfi1ab	86	69.143	ENSMGAG00000008187	GFI1	99	69.143	Meleagris_gallopavo
ENSDARG00000044457	gfi1ab	100	63.785	ENSMICG00000047208	GFI1	100	64.019	Microcebus_murinus
ENSDARG00000044457	gfi1ab	100	67.085	ENSMMOG00000005556	gfi1ab	100	66.334	Mola_mola
ENSDARG00000044457	gfi1ab	100	63.532	ENSMODG00000011802	GFI1	100	64.733	Monodelphis_domestica
ENSDARG00000044457	gfi1ab	100	68.010	ENSMALG00000014672	gfi1ab	100	68.010	Monopterus_albus
ENSDARG00000044457	gfi1ab	100	62.617	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.778	Mus_caroli
ENSDARG00000044457	gfi1ab	100	62.617	ENSMUSG00000029275	Gfi1	100	62.617	Mus_musculus
ENSDARG00000044457	gfi1ab	100	62.150	MGP_PahariEiJ_G0017280	Gfi1	100	97.778	Mus_pahari
ENSDARG00000044457	gfi1ab	100	62.617	MGP_SPRETEiJ_G0028507	Gfi1	100	62.617	Mus_spretus
ENSDARG00000044457	gfi1ab	100	66.337	ENSMPUG00000004178	GFI1	97	66.584	Mustela_putorius_furo
ENSDARG00000044457	gfi1ab	100	61.839	ENSMLUG00000015191	GFI1	97	63.615	Myotis_lucifugus
ENSDARG00000044457	gfi1ab	100	71.464	ENSNBRG00000015774	gfi1ab	100	71.464	Neolamprologus_brichardi
ENSDARG00000044457	gfi1ab	85	66.485	ENSNLEG00000010470	GFI1	91	66.213	Nomascus_leucogenys
ENSDARG00000044457	gfi1ab	100	65.187	ENSOPRG00000001473	GFI1	100	64.486	Ochotona_princeps
ENSDARG00000044457	gfi1ab	100	71.750	ENSONIG00000019246	gfi1ab	100	71.750	Oreochromis_niloticus
ENSDARG00000044457	gfi1ab	98	59.140	ENSOCUG00000023553	GFI1	93	59.140	Oryctolagus_cuniculus
ENSDARG00000044457	gfi1ab	100	68.342	ENSORLG00000013806	gfi1ab	100	68.090	Oryzias_latipes
ENSDARG00000044457	gfi1ab	100	63.457	ENSORLG00000005060	GFI1	100	63.081	Oryzias_latipes
ENSDARG00000044457	gfi1ab	100	68.170	ENSORLG00020001602	gfi1ab	100	67.920	Oryzias_latipes_hni
ENSDARG00000044457	gfi1ab	82	74.359	ENSORLG00020002817	GFI1	99	74.359	Oryzias_latipes_hni
ENSDARG00000044457	gfi1ab	100	61.728	ENSORLG00015006070	GFI1	100	61.728	Oryzias_latipes_hsok
ENSDARG00000044457	gfi1ab	100	63.342	ENSOMEG00000016722	GFI1	100	63.342	Oryzias_melastigma
ENSDARG00000044457	gfi1ab	100	64.322	ENSOGAG00000027913	GFI1	100	64.573	Otolemur_garnettii
ENSDARG00000044457	gfi1ab	98	96.190	ENSOARG00000016329	GFI1	94	68.702	Ovis_aries
ENSDARG00000044457	gfi1ab	100	64.677	ENSPPAG00000042186	GFI1	100	64.677	Pan_paniscus
ENSDARG00000044457	gfi1ab	100	64.486	ENSPPRG00000007521	GFI1	100	64.486	Panthera_pardus
ENSDARG00000044457	gfi1ab	100	64.019	ENSPTRG00000043053	GFI1	100	64.019	Pan_troglodytes
ENSDARG00000044457	gfi1ab	100	64.019	ENSPANG00000016433	GFI1	100	64.019	Papio_anubis
ENSDARG00000044457	gfi1ab	100	76.750	ENSPKIG00000004263	GFI1	100	76.500	Paramormyrops_kingsleyae
ENSDARG00000044457	gfi1ab	86	69.774	ENSPSIG00000008734	GFI1	97	69.774	Pelodiscus_sinensis
ENSDARG00000044457	gfi1ab	54	94.048	ENSPMGG00000011041	GFI1	68	94.048	Periophthalmus_magnuspinnatus
ENSDARG00000044457	gfi1ab	100	69.250	ENSPMGG00000012546	gfi1ab	100	69.250	Periophthalmus_magnuspinnatus
ENSDARG00000044457	gfi1ab	100	66.903	ENSPCIG00000013728	GFI1	100	65.814	Phascolarctos_cinereus
ENSDARG00000044457	gfi1ab	100	70.149	ENSPFOG00000023214	gfi1ab	100	70.149	Poecilia_formosa
ENSDARG00000044457	gfi1ab	100	70.149	ENSPLAG00000010879	gfi1ab	100	70.149	Poecilia_latipinna
ENSDARG00000044457	gfi1ab	100	62.990	ENSPLAG00000005376	GFI1	91	63.235	Poecilia_latipinna
ENSDARG00000044457	gfi1ab	100	63.614	ENSPMEG00000019299	GFI1	100	63.614	Poecilia_mexicana
ENSDARG00000044457	gfi1ab	100	70.398	ENSPMEG00000013694	gfi1ab	100	70.398	Poecilia_mexicana
ENSDARG00000044457	gfi1ab	100	70.500	ENSPREG00000014097	gfi1ab	100	70.500	Poecilia_reticulata
ENSDARG00000044457	gfi1ab	100	56.000	ENSPREG00000007997	GFI1	100	56.313	Poecilia_reticulata
ENSDARG00000044457	gfi1ab	100	53.132	ENSPCAG00000011020	GFI1	100	53.132	Procavia_capensis
ENSDARG00000044457	gfi1ab	100	64.019	ENSPCOG00000020540	GFI1	100	64.019	Propithecus_coquereli
ENSDARG00000044457	gfi1ab	100	63.426	ENSPVAG00000006928	GFI1	100	65.485	Pteropus_vampyrus
ENSDARG00000044457	gfi1ab	100	72.250	ENSPNYG00000021183	gfi1ab	100	72.250	Pundamilia_nyererei
ENSDARG00000044457	gfi1ab	100	74.121	ENSPNAG00000027258	gfi1ab	100	74.121	Pygocentrus_nattereri
ENSDARG00000044457	gfi1ab	100	59.360	ENSPNAG00000028014	GFI1	100	60.705	Pygocentrus_nattereri
ENSDARG00000044457	gfi1ab	100	61.582	ENSPNAG00000014299	-	98	61.582	Pygocentrus_nattereri
ENSDARG00000044457	gfi1ab	100	62.150	ENSRNOG00000002042	Gfi1	100	62.150	Rattus_norvegicus
ENSDARG00000044457	gfi1ab	100	63.785	ENSRBIG00000036467	GFI1	100	63.785	Rhinopithecus_bieti
ENSDARG00000044457	gfi1ab	100	63.785	ENSRROG00000031687	GFI1	100	63.785	Rhinopithecus_roxellana
ENSDARG00000044457	gfi1ab	100	64.252	ENSSBOG00000031300	GFI1	100	64.252	Saimiri_boliviensis_boliviensis
ENSDARG00000044457	gfi1ab	100	75.312	ENSSFOG00015020295	gfi1	100	75.062	Scleropages_formosus
ENSDARG00000044457	gfi1ab	100	68.983	ENSSMAG00000002782	gfi1ab	100	69.231	Scophthalmus_maximus
ENSDARG00000044457	gfi1ab	100	70.707	ENSSDUG00000022410	gfi1ab	100	70.707	Seriola_dumerili
ENSDARG00000044457	gfi1ab	100	70.707	ENSSLDG00000020163	gfi1ab	100	70.707	Seriola_lalandi_dorsalis
ENSDARG00000044457	gfi1ab	79	87.500	ENSSPAG00000009140	gfi1ab	100	87.500	Stegastes_partitus
ENSDARG00000044457	gfi1ab	100	64.692	ENSSSCG00000006902	GFI1	100	65.166	Sus_scrofa
ENSDARG00000044457	gfi1ab	86	67.978	ENSTGUG00000006060	GFI1	99	67.978	Taeniopygia_guttata
ENSDARG00000044457	gfi1ab	100	67.500	ENSTRUG00000000415	gfi1ab	100	67.500	Takifugu_rubripes
ENSDARG00000044457	gfi1ab	100	65.915	ENSTNIG00000000651	gfi1ab	97	65.926	Tetraodon_nigroviridis
ENSDARG00000044457	gfi1ab	100	64.336	ENSTTRG00000000082	GFI1	100	65.023	Tursiops_truncatus
ENSDARG00000044457	gfi1ab	100	65.083	ENSUAMG00000021124	GFI1	91	66.265	Ursus_americanus
ENSDARG00000044457	gfi1ab	100	65.012	ENSXETG00000023006	gfi1	98	65.012	Xenopus_tropicalis
ENSDARG00000044457	gfi1ab	100	70.250	ENSXMAG00000010523	gfi1ab	100	70.250	Xiphophorus_maculatus
ENSDARG00000044457	gfi1ab	86	56.695	ENSXMAG00000009274	GFI1	70	56.695	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0007422	peripheral nervous system development	14678828.	IEP	Process
GO:0030097	hemopoiesis	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051569	regulation of histone H3-K4 methylation	-	IEA	Process