EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000044597 (Gene tree)
Gene ID: 393112
Gene Symbol: ncbp3
Alias: zgc:55870
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 17742 bases
Position: chr21:30996076-31013817
Accession: ZDB-GENE-040426-826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000065503	NCBP3	PF10309.9	5.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000065504	-	2514	-	ENSDARP00000065503	694 (aa)	-	F1QH50

Gene Model

Click here to download ENSDARG00000044597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000044597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000044597	ncbp3	98	55.137	ENSG00000074356	NCBP3	98	53.546	Homo_sapiens
ENSDARG00000044597	ncbp3	99	65.090	ENSAPOG00000020809	ncbp3	99	64.880	Acanthochromis_polyacanthus
ENSDARG00000044597	ncbp3	98	56.076	ENSAMEG00000009372	NCBP3	92	56.025	Ailuropoda_melanoleuca
ENSDARG00000044597	ncbp3	84	62.309	ENSACIG00000024257	ncbp3	98	59.184	Amphilophus_citrinellus
ENSDARG00000044597	ncbp3	99	65.369	ENSAPEG00000020857	ncbp3	99	64.689	Amphiprion_percula
ENSDARG00000044597	ncbp3	98	65.527	ENSATEG00000010801	ncbp3	99	65.385	Anabas_testudineus
ENSDARG00000044597	ncbp3	91	55.887	ENSAPLG00000007373	NCBP3	98	55.031	Anas_platyrhynchos
ENSDARG00000044597	ncbp3	84	43.676	ENSANAG00000020550	-	88	43.154	Aotus_nancymaae
ENSDARG00000044597	ncbp3	92	54.421	ENSANAG00000024918	-	91	53.323	Aotus_nancymaae
ENSDARG00000044597	ncbp3	99	62.968	ENSACLG00000000455	ncbp3	99	63.955	Astatotilapia_calliptera
ENSDARG00000044597	ncbp3	98	74.348	ENSAMXG00000005968	ncbp3	98	74.964	Astyanax_mexicanus
ENSDARG00000044597	ncbp3	98	54.651	ENSBTAG00000016621	NCBP3	98	53.266	Bos_taurus
ENSDARG00000044597	ncbp3	97	54.545	ENSCAFG00000019371	NCBP3	95	53.676	Canis_familiaris
ENSDARG00000044597	ncbp3	97	54.545	ENSCAFG00020008143	NCBP3	95	53.676	Canis_lupus_dingo
ENSDARG00000044597	ncbp3	100	54.986	ENSCHIG00000009002	NCBP3	98	53.266	Capra_hircus
ENSDARG00000044597	ncbp3	98	55.217	ENSTSYG00000008184	NCBP3	98	53.333	Carlito_syrichta
ENSDARG00000044597	ncbp3	90	54.976	ENSCAPG00000016045	NCBP3	95	53.858	Cavia_aperea
ENSDARG00000044597	ncbp3	98	55.780	ENSCPOG00000015529	NCBP3	98	52.890	Cavia_porcellus
ENSDARG00000044597	ncbp3	98	54.820	ENSCCAG00000021154	NCBP3	98	52.950	Cebus_capucinus
ENSDARG00000044597	ncbp3	97	54.519	ENSCATG00000013041	NCBP3	95	52.632	Cercocebus_atys
ENSDARG00000044597	ncbp3	98	55.036	ENSCLAG00000012229	NCBP3	98	54.307	Chinchilla_lanigera
ENSDARG00000044597	ncbp3	98	53.111	ENSCSAG00000013543	NCBP3	98	51.230	Chlorocebus_sabaeus
ENSDARG00000044597	ncbp3	98	51.092	ENSCHOG00000012323	NCBP3	98	49.782	Choloepus_hoffmanni
ENSDARG00000044597	ncbp3	100	56.322	ENSCPBG00000014824	NCBP3	98	55.840	Chrysemys_picta_bellii
ENSDARG00000044597	ncbp3	88	60.554	ENSCANG00000033561	NCBP3	98	58.458	Colobus_angolensis_palliatus
ENSDARG00000044597	ncbp3	98	55.604	ENSCGRG00001018538	Ncbp3	98	53.602	Cricetulus_griseus_chok1gshd
ENSDARG00000044597	ncbp3	89	55.538	ENSCGRG00000015075	Ncbp3	98	54.114	Cricetulus_griseus_crigri
ENSDARG00000044597	ncbp3	99	61.711	ENSCSEG00000006375	ncbp3	99	62.216	Cynoglossus_semilaevis
ENSDARG00000044597	ncbp3	99	60.113	ENSCVAG00000020563	ncbp3	98	61.230	Cyprinodon_variegatus
ENSDARG00000044597	ncbp3	97	55.930	ENSDNOG00000006490	NCBP3	95	53.304	Dasypus_novemcinctus
ENSDARG00000044597	ncbp3	100	53.638	ENSDORG00000010141	Ncbp3	98	53.411	Dipodomys_ordii
ENSDARG00000044597	ncbp3	97	54.252	ENSEASG00005013399	NCBP3	95	51.765	Equus_asinus_asinus
ENSDARG00000044597	ncbp3	97	54.252	ENSECAG00000008444	NCBP3	95	51.765	Equus_caballus
ENSDARG00000044597	ncbp3	58	54.412	ENSEEUG00000008573	NCBP3	56	52.897	Erinaceus_europaeus
ENSDARG00000044597	ncbp3	100	66.574	ENSELUG00000009182	ncbp3	98	66.150	Esox_lucius
ENSDARG00000044597	ncbp3	98	55.248	ENSFCAG00000007929	NCBP3	98	53.644	Felis_catus
ENSDARG00000044597	ncbp3	93	56.878	ENSFALG00000006704	NCBP3	96	55.189	Ficedula_albicollis
ENSDARG00000044597	ncbp3	98	54.506	ENSFDAG00000013355	NCBP3	98	52.915	Fukomys_damarensis
ENSDARG00000044597	ncbp3	98	57.102	ENSFHEG00000005607	ncbp3	98	56.734	Fundulus_heteroclitus
ENSDARG00000044597	ncbp3	67	76.724	ENSGMOG00000001007	ncbp3	75	76.724	Gadus_morhua
ENSDARG00000044597	ncbp3	100	55.000	ENSGALG00000002653	NCBP3	98	53.655	Gallus_gallus
ENSDARG00000044597	ncbp3	80	65.780	ENSGAFG00000008912	ncbp3	80	65.954	Gambusia_affinis
ENSDARG00000044597	ncbp3	99	58.689	ENSGACG00000020902	ncbp3	97	57.034	Gasterosteus_aculeatus
ENSDARG00000044597	ncbp3	100	56.178	ENSGAGG00000014490	NCBP3	98	54.386	Gopherus_agassizii
ENSDARG00000044597	ncbp3	98	55.072	ENSGGOG00000007496	NCBP3	98	53.478	Gorilla_gorilla
ENSDARG00000044597	ncbp3	99	47.429	ENSHBUG00000019541	ncbp3	98	46.454	Haplochromis_burtoni
ENSDARG00000044597	ncbp3	98	54.876	ENSHGLG00000015839	NCBP3	98	53.869	Heterocephalus_glaber_female
ENSDARG00000044597	ncbp3	98	54.876	ENSHGLG00100007256	NCBP3	98	53.869	Heterocephalus_glaber_male
ENSDARG00000044597	ncbp3	99	61.857	ENSHCOG00000004161	ncbp3	99	63.295	Hippocampus_comes
ENSDARG00000044597	ncbp3	98	73.913	ENSIPUG00000024397	ncbp3	98	74.170	Ictalurus_punctatus
ENSDARG00000044597	ncbp3	73	57.476	ENSSTOG00000002101	NCBP3	100	56.699	Ictidomys_tridecemlineatus
ENSDARG00000044597	ncbp3	98	49.491	ENSJJAG00000000634	Ncbp3	98	47.376	Jaculus_jaculus
ENSDARG00000044597	ncbp3	98	64.407	ENSKMAG00000001932	ncbp3	99	63.662	Kryptolebias_marmoratus
ENSDARG00000044597	ncbp3	98	62.465	ENSLBEG00000001558	-	99	63.362	Labrus_bergylta
ENSDARG00000044597	ncbp3	98	60.000	ENSLBEG00000006036	ncbp3	98	60.144	Labrus_bergylta
ENSDARG00000044597	ncbp3	98	47.429	ENSLACG00000018791	NCBP3	98	48.017	Latimeria_chalumnae
ENSDARG00000044597	ncbp3	98	64.162	ENSLOCG00000006706	ncbp3	98	64.338	Lepisosteus_oculatus
ENSDARG00000044597	ncbp3	98	54.136	ENSLAFG00000002067	NCBP3	98	52.395	Loxodonta_africana
ENSDARG00000044597	ncbp3	98	55.523	ENSMFAG00000024176	NCBP3	98	53.634	Macaca_fascicularis
ENSDARG00000044597	ncbp3	98	55.523	ENSMMUG00000008556	NCBP3	98	53.634	Macaca_mulatta
ENSDARG00000044597	ncbp3	97	54.678	ENSMNEG00000041374	NCBP3	95	52.786	Macaca_nemestrina
ENSDARG00000044597	ncbp3	89	55.183	ENSMLEG00000034703	NCBP3	98	54.213	Mandrillus_leucophaeus
ENSDARG00000044597	ncbp3	99	63.523	ENSMAMG00000022461	ncbp3	99	63.713	Mastacembelus_armatus
ENSDARG00000044597	ncbp3	99	62.742	ENSMZEG00005027802	ncbp3	99	63.904	Maylandia_zebra
ENSDARG00000044597	ncbp3	95	56.692	ENSMGAG00000004685	NCBP3	96	55.712	Meleagris_gallopavo
ENSDARG00000044597	ncbp3	98	52.174	ENSMICG00000015798	NCBP3	98	50.870	Microcebus_murinus
ENSDARG00000044597	ncbp3	98	55.750	ENSMOCG00000016446	Ncbp3	98	53.613	Microtus_ochrogaster
ENSDARG00000044597	ncbp3	98	61.760	ENSMMOG00000012577	ncbp3	98	61.905	Mola_mola
ENSDARG00000044597	ncbp3	98	63.584	ENSMALG00000009173	ncbp3	98	63.271	Monopterus_albus
ENSDARG00000044597	ncbp3	98	54.294	MGP_CAROLIEiJ_G0016684	Ncbp3	98	52.693	Mus_caroli
ENSDARG00000044597	ncbp3	98	54.731	ENSMUSG00000020783	Ncbp3	98	52.518	Mus_musculus
ENSDARG00000044597	ncbp3	98	54.731	MGP_PahariEiJ_G0017817	Ncbp3	98	53.130	Mus_pahari
ENSDARG00000044597	ncbp3	98	54.731	MGP_SPRETEiJ_G0017521	Ncbp3	98	52.518	Mus_spretus
ENSDARG00000044597	ncbp3	97	55.213	ENSMPUG00000012357	NCBP3	95	54.197	Mustela_putorius_furo
ENSDARG00000044597	ncbp3	98	54.519	ENSMLUG00000017060	NCBP3	98	53.139	Myotis_lucifugus
ENSDARG00000044597	ncbp3	98	54.810	ENSNGAG00000020321	Ncbp3	98	53.061	Nannospalax_galili
ENSDARG00000044597	ncbp3	80	63.536	ENSNBRG00000017354	ncbp3	87	83.750	Neolamprologus_brichardi
ENSDARG00000044597	ncbp3	98	52.830	ENSNLEG00000017279	NCBP3	98	51.669	Nomascus_leucogenys
ENSDARG00000044597	ncbp3	67	65.574	ENSMEUG00000015701	-	77	65.574	Notamacropus_eugenii
ENSDARG00000044597	ncbp3	98	53.431	ENSOPRG00000016925	NCBP3	98	52.339	Ochotona_princeps
ENSDARG00000044597	ncbp3	98	54.294	ENSODEG00000016617	NCBP3	98	52.332	Octodon_degus
ENSDARG00000044597	ncbp3	99	65.143	ENSONIG00000007434	ncbp3	99	65.652	Oreochromis_niloticus
ENSDARG00000044597	ncbp3	100	54.728	ENSOANG00000010109	NCBP3	92	55.435	Ornithorhynchus_anatinus
ENSDARG00000044597	ncbp3	97	54.479	ENSOCUG00000008045	NCBP3	95	53.608	Oryctolagus_cuniculus
ENSDARG00000044597	ncbp3	98	63.755	ENSORLG00000013703	ncbp3	98	64.047	Oryzias_latipes
ENSDARG00000044597	ncbp3	98	62.754	ENSORLG00020011764	ncbp3	98	63.623	Oryzias_latipes_hni
ENSDARG00000044597	ncbp3	98	62.319	ENSORLG00015018733	ncbp3	98	63.242	Oryzias_latipes_hsok
ENSDARG00000044597	ncbp3	98	63.531	ENSOMEG00000017858	ncbp3	98	64.834	Oryzias_melastigma
ENSDARG00000044597	ncbp3	98	55.123	ENSOGAG00000008803	NCBP3	98	52.967	Otolemur_garnettii
ENSDARG00000044597	ncbp3	84	52.891	ENSOARG00000017750	NCBP3	98	51.478	Ovis_aries
ENSDARG00000044597	ncbp3	98	55.572	ENSPPAG00000030530	NCBP3	98	53.401	Pan_paniscus
ENSDARG00000044597	ncbp3	98	55.022	ENSPPRG00000022474	NCBP3	98	54.440	Panthera_pardus
ENSDARG00000044597	ncbp3	91	54.646	ENSPTIG00000009607	NCBP3	90	53.846	Panthera_tigris_altaica
ENSDARG00000044597	ncbp3	98	55.491	ENSPTRG00000008578	NCBP3	98	53.324	Pan_troglodytes
ENSDARG00000044597	ncbp3	98	55.362	ENSPANG00000024364	NCBP3	98	53.478	Papio_anubis
ENSDARG00000044597	ncbp3	54	60.757	ENSPKIG00000008466	ncbp3	98	59.759	Paramormyrops_kingsleyae
ENSDARG00000044597	ncbp3	84	55.897	ENSPSIG00000013732	NCBP3	97	54.991	Pelodiscus_sinensis
ENSDARG00000044597	ncbp3	99	56.188	ENSPMGG00000003344	ncbp3	98	54.820	Periophthalmus_magnuspinnatus
ENSDARG00000044597	ncbp3	98	55.750	ENSPEMG00000007746	Ncbp3	98	53.902	Peromyscus_maniculatus_bairdii
ENSDARG00000044597	ncbp3	100	55.462	ENSPCIG00000008605	NCBP3	98	53.143	Phascolarctos_cinereus
ENSDARG00000044597	ncbp3	89	61.224	ENSPFOG00000000721	ncbp3	97	60.911	Poecilia_formosa
ENSDARG00000044597	ncbp3	98	61.946	ENSPLAG00000015399	ncbp3	99	63.181	Poecilia_latipinna
ENSDARG00000044597	ncbp3	98	62.894	ENSPMEG00000000896	ncbp3	99	62.607	Poecilia_mexicana
ENSDARG00000044597	ncbp3	98	62.340	ENSPREG00000001681	ncbp3	99	61.966	Poecilia_reticulata
ENSDARG00000044597	ncbp3	97	54.294	ENSPPYG00000007823	NCBP3	95	52.701	Pongo_abelii
ENSDARG00000044597	ncbp3	100	50.787	ENSPCAG00000012614	NCBP3	98	49.708	Procavia_capensis
ENSDARG00000044597	ncbp3	98	55.507	ENSPCOG00000016793	NCBP3	98	54.203	Propithecus_coquereli
ENSDARG00000044597	ncbp3	95	51.667	ENSPVAG00000012746	NCBP3	91	51.020	Pteropus_vampyrus
ENSDARG00000044597	ncbp3	99	61.790	ENSPNYG00000022677	ncbp3	98	60.750	Pundamilia_nyererei
ENSDARG00000044597	ncbp3	98	74.240	ENSPNAG00000003219	ncbp3	98	75.360	Pygocentrus_nattereri
ENSDARG00000044597	ncbp3	98	54.876	ENSRNOG00000018550	Ncbp3	98	52.838	Rattus_norvegicus
ENSDARG00000044597	ncbp3	98	55.362	ENSRBIG00000033247	NCBP3	98	53.478	Rhinopithecus_bieti
ENSDARG00000044597	ncbp3	98	55.362	ENSRROG00000043833	NCBP3	99	52.717	Rhinopithecus_roxellana
ENSDARG00000044597	ncbp3	98	54.978	ENSSBOG00000023178	NCBP3	98	53.391	Saimiri_boliviensis_boliviensis
ENSDARG00000044597	ncbp3	83	55.385	ENSSHAG00000003466	NCBP3	97	53.054	Sarcophilus_harrisii
ENSDARG00000044597	ncbp3	100	63.866	ENSSFOG00015005808	ncbp3	98	63.885	Scleropages_formosus
ENSDARG00000044597	ncbp3	98	60.306	ENSSMAG00000010917	ncbp3	99	63.010	Scophthalmus_maximus
ENSDARG00000044597	ncbp3	99	62.661	ENSSDUG00000023402	ncbp3	99	63.916	Seriola_dumerili
ENSDARG00000044597	ncbp3	88	62.441	ENSSLDG00000000742	ncbp3	98	54.191	Seriola_lalandi_dorsalis
ENSDARG00000044597	ncbp3	56	54.271	ENSSARG00000006634	NCBP3	98	48.281	Sorex_araneus
ENSDARG00000044597	ncbp3	100	55.350	ENSSPUG00000002240	NCBP3	98	52.830	Sphenodon_punctatus
ENSDARG00000044597	ncbp3	99	63.586	ENSSPAG00000011223	ncbp3	99	64.056	Stegastes_partitus
ENSDARG00000044597	ncbp3	98	55.102	ENSSSCG00000017870	NCBP3	98	52.478	Sus_scrofa
ENSDARG00000044597	ncbp3	98	55.994	ENSTGUG00000005396	NCBP3	98	54.971	Taeniopygia_guttata
ENSDARG00000044597	ncbp3	99	62.622	ENSTRUG00000003769	ncbp3	98	63.453	Takifugu_rubripes
ENSDARG00000044597	ncbp3	99	60.455	ENSTNIG00000004776	ncbp3	98	60.658	Tetraodon_nigroviridis
ENSDARG00000044597	ncbp3	98	51.017	ENSTBEG00000006308	NCBP3	98	49.564	Tupaia_belangeri
ENSDARG00000044597	ncbp3	98	50.583	ENSTTRG00000005845	NCBP3	98	48.261	Tursiops_truncatus
ENSDARG00000044597	ncbp3	98	54.208	ENSUAMG00000014043	NCBP3	98	53.352	Ursus_americanus
ENSDARG00000044597	ncbp3	89	55.412	ENSUMAG00000007519	NCBP3	96	54.487	Ursus_maritimus
ENSDARG00000044597	ncbp3	97	50.585	ENSVVUG00000026079	NCBP3	95	50.147	Vulpes_vulpes
ENSDARG00000044597	ncbp3	100	51.937	ENSXETG00000012965	ncbp3	98	50.146	Xenopus_tropicalis
ENSDARG00000044597	ncbp3	90	76.190	ENSXCOG00000018393	ncbp3	99	76.190	Xiphophorus_couchianus
ENSDARG00000044597	ncbp3	98	62.894	ENSXMAG00000006849	ncbp3	98	63.016	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000340	RNA 7-methylguanosine cap binding	-	IEA	Function
GO:0000340	RNA 7-methylguanosine cap binding	-	ISS	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	-	IEA	Function
GO:0003729	mRNA binding	-	ISS	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0006370	7-methylguanosine mRNA capping	-	IEA	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0051028	mRNA transport	-	IEA	Process