EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000044942 (Gene tree)
Gene ID: 393277
Gene Symbol: mrpl45
Alias: zgc:56480
Full Name: mitochondrial ribosomal protein L45
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8719
Position: chr11: 12096199-12104917
Accession: ZDB-GENE-040426-1041
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	preZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000136108	-	1041	-	ENSDARP00000121834	316 (aa)	-	E9QEK4
ENSDART00000133236	-	927	-	ENSDARP00000115414	91 (aa)	-	F1Q718

Gene Model

Click here to download ENSDARG00000044942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000044942's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000044942	mrpl45	69	36.486	WBGene00022493	mrpl-45	62	36.486	Caenorhabditis_elegans
ENSDARG00000044942	mrpl45	76	47.154	FBgn0263863	mRpL45	62	50.000	Drosophila_melanogaster
ENSDARG00000044942	mrpl45	93	55.782	ENSG00000278845	MRPL45	99	54.194	Homo_sapiens
ENSDARG00000044942	mrpl45	88	59.353	ENSMUSG00000018882	Mrpl45	91	59.353	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component