EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000045155 (Gene tree)
Gene ID: 286774
Gene Symbol: phf5a
Alias: chunp6910|un-named hi1373|unm hi1373
Full Name: PHD finger protein 5A
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5241 bases
Position: chr12:19138452-19143692
Accession: ZDB-GENE-021219-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000066396	PHF5	PF03660.14	2.8e-49	1	1
ENSDARP00000113996	PHF5	PF03660.14	1.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000066397	-	525	-	ENSDARP00000066396	110 (aa)	-	Q6YMR2
ENSDART00000141346	-	396	-	ENSDARP00000113996	102 (aa)	-	E9QHY3
ENSDART00000144771	-	769	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000045155's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000045155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000045155	phf5a	100	100.000	ENSG00000100410	PHF5A	100	100.000	Homo_sapiens
ENSDARG00000045155	phf5a	100	100.000	ENSAPOG00000017805	phf5a	100	100.000	Acanthochromis_polyacanthus
ENSDARG00000045155	phf5a	74	100.000	ENSAMEG00000015687	PHF5A	100	100.000	Ailuropoda_melanoleuca
ENSDARG00000045155	phf5a	100	100.000	ENSACIG00000021628	phf5a	100	100.000	Amphilophus_citrinellus
ENSDARG00000045155	phf5a	100	100.000	ENSAOCG00000020917	phf5a	100	100.000	Amphiprion_ocellaris
ENSDARG00000045155	phf5a	100	100.000	ENSAPEG00000020260	phf5a	100	100.000	Amphiprion_percula
ENSDARG00000045155	phf5a	100	100.000	ENSATEG00000006506	phf5a	100	100.000	Anabas_testudineus
ENSDARG00000045155	phf5a	100	100.000	ENSATEG00000007455	phf5a	100	100.000	Anabas_testudineus
ENSDARG00000045155	phf5a	100	100.000	ENSACAG00000004775	PHF5A	100	100.000	Anolis_carolinensis
ENSDARG00000045155	phf5a	100	100.000	ENSANAG00000028988	-	100	100.000	Aotus_nancymaae
ENSDARG00000045155	phf5a	100	82.727	ENSANAG00000036831	-	100	82.727	Aotus_nancymaae
ENSDARG00000045155	phf5a	100	81.818	ENSANAG00000022538	-	100	81.818	Aotus_nancymaae
ENSDARG00000045155	phf5a	99	94.059	ENSANAG00000020141	-	92	94.059	Aotus_nancymaae
ENSDARG00000045155	phf5a	100	100.000	ENSACLG00000019161	phf5a	100	100.000	Astatotilapia_calliptera
ENSDARG00000045155	phf5a	100	100.000	ENSAMXG00000035422	phf5a	100	100.000	Astyanax_mexicanus
ENSDARG00000045155	phf5a	100	100.000	ENSBTAG00000006423	PHF5A	100	100.000	Bos_taurus
ENSDARG00000045155	phf5a	99	90.826	WBGene00004016	phf-5	99	90.826	Caenorhabditis_elegans
ENSDARG00000045155	phf5a	100	100.000	ENSCJAG00000004999	PHF5A	100	100.000	Callithrix_jacchus
ENSDARG00000045155	phf5a	100	100.000	ENSCAFG00000001090	PHF5A	100	100.000	Canis_familiaris
ENSDARG00000045155	phf5a	100	100.000	ENSCAFG00020001984	PHF5A	100	100.000	Canis_lupus_dingo
ENSDARG00000045155	phf5a	100	95.327	ENSCHIG00000015826	PHF5A	100	95.327	Capra_hircus
ENSDARG00000045155	phf5a	100	100.000	ENSTSYG00000001082	PHF5A	100	100.000	Carlito_syrichta
ENSDARG00000045155	phf5a	82	100.000	ENSCAPG00000007769	PHF5A	87	100.000	Cavia_aperea
ENSDARG00000045155	phf5a	100	100.000	ENSCPOG00000033309	PHF5A	100	100.000	Cavia_porcellus
ENSDARG00000045155	phf5a	100	100.000	ENSCCAG00000037141	-	100	100.000	Cebus_capucinus
ENSDARG00000045155	phf5a	100	85.294	ENSCCAG00000037275	-	100	85.294	Cebus_capucinus
ENSDARG00000045155	phf5a	100	67.273	ENSCCAG00000009204	-	100	67.273	Cebus_capucinus
ENSDARG00000045155	phf5a	100	100.000	ENSCATG00000012251	PHF5A	100	100.000	Cercocebus_atys
ENSDARG00000045155	phf5a	100	100.000	ENSCLAG00000016714	-	100	100.000	Chinchilla_lanigera
ENSDARG00000045155	phf5a	100	69.369	ENSCLAG00000014324	-	100	69.369	Chinchilla_lanigera
ENSDARG00000045155	phf5a	100	100.000	ENSCSAG00000005811	PHF5A	100	100.000	Chlorocebus_sabaeus
ENSDARG00000045155	phf5a	100	90.909	ENSCHOG00000003545	PHF5A	100	90.909	Choloepus_hoffmanni
ENSDARG00000045155	phf5a	100	100.000	ENSCPBG00000020547	PHF5A	100	100.000	Chrysemys_picta_bellii
ENSDARG00000045155	phf5a	100	97.273	ENSCSAVG00000007539	-	100	97.273	Ciona_savignyi
ENSDARG00000045155	phf5a	100	100.000	ENSCANG00000032125	PHF5A	100	100.000	Colobus_angolensis_palliatus
ENSDARG00000045155	phf5a	100	100.000	ENSCGRG00001017936	Phf5a	100	100.000	Cricetulus_griseus_chok1gshd
ENSDARG00000045155	phf5a	100	100.000	ENSCGRG00000012081	Phf5a	100	100.000	Cricetulus_griseus_crigri
ENSDARG00000045155	phf5a	100	100.000	ENSCSEG00000020499	phf5a	100	100.000	Cynoglossus_semilaevis
ENSDARG00000045155	phf5a	100	100.000	ENSCVAG00000006090	phf5a	100	100.000	Cyprinodon_variegatus
ENSDARG00000045155	phf5a	74	100.000	ENSDNOG00000034362	PHF5A	70	100.000	Dasypus_novemcinctus
ENSDARG00000045155	phf5a	100	100.000	ENSDORG00000002205	Phf5a	100	100.000	Dipodomys_ordii
ENSDARG00000045155	phf5a	99	96.330	FBgn0031822	Phf5a	98	96.330	Drosophila_melanogaster
ENSDARG00000045155	phf5a	100	100.000	ENSETEG00000010741	PHF5A	100	100.000	Echinops_telfairi
ENSDARG00000045155	phf5a	100	98.077	ENSEBUG00000009125	-	100	98.077	Eptatretus_burgeri
ENSDARG00000045155	phf5a	100	100.000	ENSEASG00005001560	PHF5A	100	100.000	Equus_asinus_asinus
ENSDARG00000045155	phf5a	100	100.000	ENSECAG00000023225	PHF5A	100	100.000	Equus_caballus
ENSDARG00000045155	phf5a	100	100.000	ENSELUG00000019796	phf5a	100	100.000	Esox_lucius
ENSDARG00000045155	phf5a	100	100.000	ENSFCAG00000003676	PHF5A	100	100.000	Felis_catus
ENSDARG00000045155	phf5a	85	100.000	ENSFALG00000011963	PHF5A	100	100.000	Ficedula_albicollis
ENSDARG00000045155	phf5a	100	100.000	ENSFDAG00000010822	PHF5A	100	100.000	Fukomys_damarensis
ENSDARG00000045155	phf5a	100	100.000	ENSFHEG00000012724	phf5a	100	100.000	Fundulus_heteroclitus
ENSDARG00000045155	phf5a	99	100.000	ENSGMOG00000013318	phf5a	98	100.000	Gadus_morhua
ENSDARG00000045155	phf5a	100	100.000	ENSGALG00000011953	PHF5A	100	100.000	Gallus_gallus
ENSDARG00000045155	phf5a	100	100.000	ENSGAFG00000008235	phf5a	100	100.000	Gambusia_affinis
ENSDARG00000045155	phf5a	100	100.000	ENSGACG00000004777	phf5a	100	100.000	Gasterosteus_aculeatus
ENSDARG00000045155	phf5a	100	100.000	ENSGAGG00000017494	PHF5A	100	100.000	Gopherus_agassizii
ENSDARG00000045155	phf5a	100	100.000	ENSGGOG00000001104	PHF5A	100	100.000	Gorilla_gorilla
ENSDARG00000045155	phf5a	100	100.000	ENSHBUG00000004040	phf5a	100	92.593	Haplochromis_burtoni
ENSDARG00000045155	phf5a	99	90.826	ENSHGLG00000020143	-	100	90.826	Heterocephalus_glaber_female
ENSDARG00000045155	phf5a	100	100.000	ENSHGLG00000012537	PHF5A	100	100.000	Heterocephalus_glaber_female
ENSDARG00000045155	phf5a	74	95.062	ENSHGLG00100000188	-	86	95.062	Heterocephalus_glaber_male
ENSDARG00000045155	phf5a	100	80.292	ENSHCOG00000010129	phf5a	100	80.292	Hippocampus_comes
ENSDARG00000045155	phf5a	100	100.000	ENSIPUG00000001222	phf5a	100	100.000	Ictalurus_punctatus
ENSDARG00000045155	phf5a	100	100.000	ENSSTOG00000016207	PHF5A	100	100.000	Ictidomys_tridecemlineatus
ENSDARG00000045155	phf5a	100	100.000	ENSJJAG00000011261	Phf5a	100	100.000	Jaculus_jaculus
ENSDARG00000045155	phf5a	100	100.000	ENSKMAG00000006739	phf5a	100	100.000	Kryptolebias_marmoratus
ENSDARG00000045155	phf5a	100	100.000	ENSLBEG00000002141	phf5a	100	100.000	Labrus_bergylta
ENSDARG00000045155	phf5a	74	100.000	ENSLACG00000012094	PHF5A	87	100.000	Latimeria_chalumnae
ENSDARG00000045155	phf5a	100	100.000	ENSLAFG00000028840	PHF5A	100	100.000	Loxodonta_africana
ENSDARG00000045155	phf5a	100	100.000	ENSMFAG00000003129	PHF5A	100	100.000	Macaca_fascicularis
ENSDARG00000045155	phf5a	100	93.636	ENSMMUG00000011354	-	100	93.636	Macaca_mulatta
ENSDARG00000045155	phf5a	74	87.654	ENSMMUG00000019698	-	100	87.654	Macaca_mulatta
ENSDARG00000045155	phf5a	97	84.112	ENSMNEG00000010618	-	96	84.112	Macaca_nemestrina
ENSDARG00000045155	phf5a	100	100.000	ENSMNEG00000045104	PHF5A	100	100.000	Macaca_nemestrina
ENSDARG00000045155	phf5a	100	100.000	ENSMLEG00000037662	PHF5A	100	100.000	Mandrillus_leucophaeus
ENSDARG00000045155	phf5a	88	91.753	ENSMLEG00000038352	-	84	91.753	Mandrillus_leucophaeus
ENSDARG00000045155	phf5a	100	100.000	ENSMAMG00000003744	phf5a	100	100.000	Mastacembelus_armatus
ENSDARG00000045155	phf5a	100	100.000	ENSMZEG00005019188	phf5a	74	100.000	Maylandia_zebra
ENSDARG00000045155	phf5a	100	100.000	ENSMGAG00000012169	PHF5A	100	100.000	Meleagris_gallopavo
ENSDARG00000045155	phf5a	100	100.000	ENSMAUG00000017124	Phf5a	100	100.000	Mesocricetus_auratus
ENSDARG00000045155	phf5a	100	100.000	ENSMICG00000013520	PHF5A	100	100.000	Microcebus_murinus
ENSDARG00000045155	phf5a	100	100.000	ENSMOCG00000015149	Phf5a	100	100.000	Microtus_ochrogaster
ENSDARG00000045155	phf5a	100	100.000	ENSMMOG00000003636	phf5a	100	100.000	Mola_mola
ENSDARG00000045155	phf5a	100	100.000	ENSMODG00000016556	PHF5A	100	100.000	Monodelphis_domestica
ENSDARG00000045155	phf5a	100	100.000	ENSMALG00000008655	phf5a	100	100.000	Monopterus_albus
ENSDARG00000045155	phf5a	100	100.000	MGP_CAROLIEiJ_G0020061	Phf5a	100	100.000	Mus_caroli
ENSDARG00000045155	phf5a	100	100.000	ENSMUSG00000061360	Phf5a	100	100.000	Mus_musculus
ENSDARG00000045155	phf5a	100	100.000	MGP_PahariEiJ_G0020063	Phf5a	100	100.000	Mus_pahari
ENSDARG00000045155	phf5a	100	100.000	ENSMPUG00000016398	PHF5A	100	100.000	Mustela_putorius_furo
ENSDARG00000045155	phf5a	100	100.000	ENSMLUG00000002465	PHF5A	100	100.000	Myotis_lucifugus
ENSDARG00000045155	phf5a	100	100.000	ENSNGAG00000001430	Phf5a	100	100.000	Nannospalax_galili
ENSDARG00000045155	phf5a	100	100.000	ENSNBRG00000004747	phf5a	100	100.000	Neolamprologus_brichardi
ENSDARG00000045155	phf5a	74	100.000	ENSNLEG00000015481	-	100	100.000	Nomascus_leucogenys
ENSDARG00000045155	phf5a	84	100.000	ENSMEUG00000002019	PHF5A	100	100.000	Notamacropus_eugenii
ENSDARG00000045155	phf5a	100	100.000	ENSOPRG00000000358	PHF5A	100	100.000	Ochotona_princeps
ENSDARG00000045155	phf5a	100	100.000	ENSODEG00000013125	-	100	100.000	Octodon_degus
ENSDARG00000045155	phf5a	100	85.455	ENSODEG00000012449	-	100	85.455	Octodon_degus
ENSDARG00000045155	phf5a	100	100.000	ENSONIG00000019693	phf5a	100	100.000	Oreochromis_niloticus
ENSDARG00000045155	phf5a	85	100.000	ENSOANG00000000616	-	100	100.000	Ornithorhynchus_anatinus
ENSDARG00000045155	phf5a	100	100.000	ENSOCUG00000012705	PHF5A	100	100.000	Oryctolagus_cuniculus
ENSDARG00000045155	phf5a	100	100.000	ENSORLG00000002591	phf5a	100	100.000	Oryzias_latipes
ENSDARG00000045155	phf5a	100	100.000	ENSORLG00020007407	phf5a	100	100.000	Oryzias_latipes_hni
ENSDARG00000045155	phf5a	100	100.000	ENSORLG00015006160	phf5a	100	100.000	Oryzias_latipes_hsok
ENSDARG00000045155	phf5a	100	100.000	ENSOMEG00000008564	phf5a	100	100.000	Oryzias_melastigma
ENSDARG00000045155	phf5a	100	100.000	ENSOGAG00000002839	-	100	100.000	Otolemur_garnettii
ENSDARG00000045155	phf5a	100	97.273	ENSOGAG00000025336	-	100	97.273	Otolemur_garnettii
ENSDARG00000045155	phf5a	100	88.182	ENSOGAG00000032258	-	100	88.182	Otolemur_garnettii
ENSDARG00000045155	phf5a	100	100.000	ENSOARG00000018246	PHF5A	99	100.000	Ovis_aries
ENSDARG00000045155	phf5a	100	100.000	ENSPPAG00000008422	PHF5A	100	100.000	Pan_paniscus
ENSDARG00000045155	phf5a	100	100.000	ENSPPRG00000006194	PHF5A	100	100.000	Panthera_pardus
ENSDARG00000045155	phf5a	100	100.000	ENSPTIG00000014228	PHF5A	100	100.000	Panthera_tigris_altaica
ENSDARG00000045155	phf5a	100	74.545	ENSPTRG00000050019	-	100	74.545	Pan_troglodytes
ENSDARG00000045155	phf5a	100	100.000	ENSPTRG00000014427	PHF5A	100	100.000	Pan_troglodytes
ENSDARG00000045155	phf5a	100	100.000	ENSPANG00000011337	PHF5A	100	100.000	Papio_anubis
ENSDARG00000045155	phf5a	100	98.182	ENSPKIG00000003100	phf5a	100	98.182	Paramormyrops_kingsleyae
ENSDARG00000045155	phf5a	100	100.000	ENSPSIG00000007014	PHF5A	100	100.000	Pelodiscus_sinensis
ENSDARG00000045155	phf5a	72	100.000	ENSPMGG00000003502	phf5a	59	100.000	Periophthalmus_magnuspinnatus
ENSDARG00000045155	phf5a	100	100.000	ENSPMAG00000002668	phf5a	100	100.000	Petromyzon_marinus
ENSDARG00000045155	phf5a	100	100.000	ENSPFOG00000016814	phf5a	100	100.000	Poecilia_formosa
ENSDARG00000045155	phf5a	100	100.000	ENSPLAG00000001292	phf5a	100	100.000	Poecilia_latipinna
ENSDARG00000045155	phf5a	100	100.000	ENSPMEG00000010165	phf5a	100	100.000	Poecilia_mexicana
ENSDARG00000045155	phf5a	100	100.000	ENSPREG00000020700	phf5a	100	100.000	Poecilia_reticulata
ENSDARG00000045155	phf5a	100	100.000	ENSPPYG00000011870	PHF5A	100	100.000	Pongo_abelii
ENSDARG00000045155	phf5a	100	100.000	ENSPCAG00000009709	PHF5A	100	100.000	Procavia_capensis
ENSDARG00000045155	phf5a	100	100.000	ENSPCOG00000014332	PHF5A	100	100.000	Propithecus_coquereli
ENSDARG00000045155	phf5a	100	100.000	ENSPVAG00000001162	PHF5A	100	100.000	Pteropus_vampyrus
ENSDARG00000045155	phf5a	100	100.000	ENSPNYG00000004375	phf5a	100	100.000	Pundamilia_nyererei
ENSDARG00000045155	phf5a	100	100.000	ENSPNAG00000011460	phf5a	100	100.000	Pygocentrus_nattereri
ENSDARG00000045155	phf5a	100	100.000	ENSRNOG00000024170	Phf5a	100	100.000	Rattus_norvegicus
ENSDARG00000045155	phf5a	74	100.000	ENSRBIG00000030586	-	92	100.000	Rhinopithecus_bieti
ENSDARG00000045155	phf5a	100	71.845	ENSRBIG00000044640	-	100	71.845	Rhinopithecus_bieti
ENSDARG00000045155	phf5a	100	100.000	ENSRROG00000038952	PHF5A	100	100.000	Rhinopithecus_roxellana
ENSDARG00000045155	phf5a	95	56.190	YPR094W	-	98	56.190	Saccharomyces_cerevisiae
ENSDARG00000045155	phf5a	87	83.516	ENSSBOG00000019049	-	100	83.516	Saimiri_boliviensis_boliviensis
ENSDARG00000045155	phf5a	74	100.000	ENSSBOG00000025096	-	76	100.000	Saimiri_boliviensis_boliviensis
ENSDARG00000045155	phf5a	100	88.235	ENSSHAG00000009937	PHF5A	100	88.235	Sarcophilus_harrisii
ENSDARG00000045155	phf5a	100	100.000	ENSSFOG00015013765	phf5a	100	100.000	Scleropages_formosus
ENSDARG00000045155	phf5a	100	100.000	ENSSMAG00000007054	phf5a	100	100.000	Scophthalmus_maximus
ENSDARG00000045155	phf5a	100	100.000	ENSSDUG00000008019	phf5a	100	100.000	Seriola_dumerili
ENSDARG00000045155	phf5a	100	100.000	ENSSLDG00000009619	phf5a	100	100.000	Seriola_lalandi_dorsalis
ENSDARG00000045155	phf5a	83	87.912	ENSSLDG00000011535	-	100	87.912	Seriola_lalandi_dorsalis
ENSDARG00000045155	phf5a	100	99.091	ENSSARG00000003769	PHF5A	100	99.091	Sorex_araneus
ENSDARG00000045155	phf5a	100	99.091	ENSSPUG00000011593	PHF5A	100	99.091	Sphenodon_punctatus
ENSDARG00000045155	phf5a	100	100.000	ENSSPAG00000022955	phf5a	100	100.000	Stegastes_partitus
ENSDARG00000045155	phf5a	100	100.000	ENSSSCG00000035082	PHF5A	100	100.000	Sus_scrofa
ENSDARG00000045155	phf5a	85	100.000	ENSTGUG00000009936	PHF5A	100	100.000	Taeniopygia_guttata
ENSDARG00000045155	phf5a	100	100.000	ENSTRUG00000023867	phf5a	100	100.000	Takifugu_rubripes
ENSDARG00000045155	phf5a	100	100.000	ENSTNIG00000012939	phf5a	100	100.000	Tetraodon_nigroviridis
ENSDARG00000045155	phf5a	100	90.909	ENSTBEG00000010945	PHF5A	100	90.909	Tupaia_belangeri
ENSDARG00000045155	phf5a	100	100.000	ENSTTRG00000003369	PHF5A	100	100.000	Tursiops_truncatus
ENSDARG00000045155	phf5a	74	100.000	ENSUAMG00000022580	PHF5A	95	100.000	Ursus_americanus
ENSDARG00000045155	phf5a	100	95.327	ENSUMAG00000021030	PHF5A	100	95.327	Ursus_maritimus
ENSDARG00000045155	phf5a	84	100.000	ENSVPAG00000002614	PHF5A	100	100.000	Vicugna_pacos
ENSDARG00000045155	phf5a	100	100.000	ENSVVUG00000003634	PHF5A	100	100.000	Vulpes_vulpes
ENSDARG00000045155	phf5a	100	100.000	ENSXETG00000006893	phf5a	100	100.000	Xenopus_tropicalis
ENSDARG00000045155	phf5a	100	100.000	ENSXCOG00000000364	phf5a	100	100.000	Xiphophorus_couchianus
ENSDARG00000045155	phf5a	74	100.000	ENSXMAG00000000679	phf5a	92	100.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0005686	U2 snRNP	21873635.	IBA	Component
GO:0005689	U12-type spliceosomal complex	21873635.	IBA	Component