EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000045484 (Gene tree)
Gene ID: 568176
Gene Symbol: dcp1b
Alias: mitc1l|si:ch211-87p6none
Full Name: decapping mRNA 1B
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 11965 bases
Position: chr4:20302832-20314796
Accession: ZDB-GENE-040819-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000112637	DCP1	PF06058.13	4.2e-43	1	1
ENSDARP00000066893	DCP1	PF06058.13	4.3e-43	1	1
ENSDARP00000152443	DCP1	PF06058.13	4.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000066894	-	2447	XM_021475124	ENSDARP00000066893	499 (aa)	XP_021330799	F1RC83
ENSDART00000188123	-	2515	-	ENSDARP00000152443	522 (aa)	-	A0A2R8RTG2
ENSDART00000136350	-	1687	-	ENSDARP00000112637	496 (aa)	-	Q5RH08

Gene Model

Click here to download ENSDARG00000045484's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000045484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000045484	dcp1b	87	54.545	ENSG00000151065	DCP1B	89	71.698	Homo_sapiens
ENSDARG00000045484	dcp1b	77	60.638	ENSAPOG00000009617	dcp1b	99	44.796	Acanthochromis_polyacanthus
ENSDARG00000045484	dcp1b	98	41.899	ENSAMEG00000004141	DCP1B	98	41.708	Ailuropoda_melanoleuca
ENSDARG00000045484	dcp1b	77	61.702	ENSAOCG00000024199	dcp1b	99	43.025	Amphiprion_ocellaris
ENSDARG00000045484	dcp1b	77	61.702	ENSAPEG00000004530	dcp1b	99	43.255	Amphiprion_percula
ENSDARG00000045484	dcp1b	82	61.458	ENSATEG00000015045	dcp1b	99	43.822	Anabas_testudineus
ENSDARG00000045484	dcp1b	97	44.202	ENSAPLG00000004762	DCP1B	97	44.202	Anas_platyrhynchos
ENSDARG00000045484	dcp1b	98	42.314	ENSACAG00000005541	DCP1B	95	43.760	Anolis_carolinensis
ENSDARG00000045484	dcp1b	86	53.086	ENSANAG00000025391	DCP1B	69	71.429	Aotus_nancymaae
ENSDARG00000045484	dcp1b	97	54.492	ENSACLG00000026164	dcp1b	99	54.476	Astatotilapia_calliptera
ENSDARG00000045484	dcp1b	100	58.027	ENSAMXG00000007683	dcp1b	100	61.333	Astyanax_mexicanus
ENSDARG00000045484	dcp1b	99	43.051	ENSBTAG00000030285	DCP1B	99	42.736	Bos_taurus
ENSDARG00000045484	dcp1b	86	54.012	ENSCJAG00000039529	DCP1B	78	53.823	Callithrix_jacchus
ENSDARG00000045484	dcp1b	99	41.440	ENSCAFG00000015993	DCP1B	99	41.440	Canis_familiaris
ENSDARG00000045484	dcp1b	99	41.440	ENSCAFG00020012014	DCP1B	99	41.440	Canis_lupus_dingo
ENSDARG00000045484	dcp1b	97	43.229	ENSCHIG00000014193	DCP1B	99	42.593	Capra_hircus
ENSDARG00000045484	dcp1b	98	42.079	ENSTSYG00000008455	DCP1B	99	42.208	Carlito_syrichta
ENSDARG00000045484	dcp1b	89	36.398	ENSCAPG00000012066	DCP1B	99	36.538	Cavia_aperea
ENSDARG00000045484	dcp1b	99	42.409	ENSCPOG00000005279	DCP1B	99	42.623	Cavia_porcellus
ENSDARG00000045484	dcp1b	86	54.012	ENSCCAG00000026870	DCP1B	69	71.429	Cebus_capucinus
ENSDARG00000045484	dcp1b	87	53.799	ENSCATG00000031397	DCP1B	69	71.698	Cercocebus_atys
ENSDARG00000045484	dcp1b	87	54.462	ENSCSAG00000011349	DCP1B	80	54.462	Chlorocebus_sabaeus
ENSDARG00000045484	dcp1b	85	39.219	ENSCHOG00000003452	DCP1B	98	39.360	Choloepus_hoffmanni
ENSDARG00000045484	dcp1b	95	47.518	ENSCPBG00000027442	DCP1B	98	47.059	Chrysemys_picta_bellii
ENSDARG00000045484	dcp1b	87	54.434	ENSCANG00000036019	DCP1B	69	71.698	Colobus_angolensis_palliatus
ENSDARG00000045484	dcp1b	61	51.385	ENSCGRG00001016549	Dcp1b	57	50.296	Cricetulus_griseus_chok1gshd
ENSDARG00000045484	dcp1b	52	50.538	ENSCGRG00000013122	Dcp1b	51	50.538	Cricetulus_griseus_crigri
ENSDARG00000045484	dcp1b	61	47.826	ENSCSEG00000009048	dcp1b	59	48.849	Cynoglossus_semilaevis
ENSDARG00000045484	dcp1b	97	43.082	ENSCVAG00000015026	dcp1b	99	43.390	Cyprinodon_variegatus
ENSDARG00000045484	dcp1b	87	54.740	ENSDNOG00000003156	DCP1B	80	54.878	Dasypus_novemcinctus
ENSDARG00000045484	dcp1b	73	71.698	ENSETEG00000005873	DCP1B	68	71.698	Echinops_telfairi
ENSDARG00000045484	dcp1b	93	53.659	ENSEASG00005008434	DCP1B	75	53.659	Equus_asinus_asinus
ENSDARG00000045484	dcp1b	93	53.659	ENSECAG00000018293	DCP1B	84	53.495	Equus_caballus
ENSDARG00000045484	dcp1b	90	36.918	ENSEEUG00000007906	DCP1B	99	36.918	Erinaceus_europaeus
ENSDARG00000045484	dcp1b	64	56.640	ENSELUG00000011344	dcp1b	100	43.664	Esox_lucius
ENSDARG00000045484	dcp1b	99	42.308	ENSFCAG00000004819	DCP1B	99	42.308	Felis_catus
ENSDARG00000045484	dcp1b	83	41.221	ENSFALG00000003240	DCP1B	99	40.748	Ficedula_albicollis
ENSDARG00000045484	dcp1b	83	54.030	ENSFDAG00000018093	DCP1B	81	54.142	Fukomys_damarensis
ENSDARG00000045484	dcp1b	75	59.375	ENSFHEG00000019846	dcp1b	98	44.778	Fundulus_heteroclitus
ENSDARG00000045484	dcp1b	95	44.822	ENSGALG00000050288	DCP1B	98	44.444	Gallus_gallus
ENSDARG00000045484	dcp1b	99	43.849	ENSGAFG00000016200	dcp1b	99	44.637	Gambusia_affinis
ENSDARG00000045484	dcp1b	86	56.287	ENSGACG00000019692	dcp1b	78	56.587	Gasterosteus_aculeatus
ENSDARG00000045484	dcp1b	98	45.108	ENSGAGG00000014114	DCP1B	98	45.108	Gopherus_agassizii
ENSDARG00000045484	dcp1b	87	54.217	ENSGGOG00000010659	DCP1B	89	71.698	Gorilla_gorilla
ENSDARG00000045484	dcp1b	80	58.333	ENSHBUG00000006101	dcp1b	99	45.310	Haplochromis_burtoni
ENSDARG00000045484	dcp1b	83	54.192	ENSHGLG00000019233	DCP1B	99	43.046	Heterocephalus_glaber_female
ENSDARG00000045484	dcp1b	83	54.192	ENSHGLG00100007645	DCP1B	99	43.046	Heterocephalus_glaber_male
ENSDARG00000045484	dcp1b	96	49.518	ENSHCOG00000014509	dcp1b	99	49.343	Hippocampus_comes
ENSDARG00000045484	dcp1b	98	41.374	ENSSTOG00000027287	DCP1B	99	42.283	Ictidomys_tridecemlineatus
ENSDARG00000045484	dcp1b	99	42.582	ENSKMAG00000014961	dcp1b	76	72.973	Kryptolebias_marmoratus
ENSDARG00000045484	dcp1b	97	43.367	ENSLACG00000017357	DCP1B	98	43.311	Latimeria_chalumnae
ENSDARG00000045484	dcp1b	99	50.173	ENSLOCG00000016629	dcp1b	99	51.384	Lepisosteus_oculatus
ENSDARG00000045484	dcp1b	87	53.799	ENSMFAG00000028687	DCP1B	69	71.698	Macaca_fascicularis
ENSDARG00000045484	dcp1b	87	53.963	ENSMMUG00000010992	DCP1B	75	71.698	Macaca_mulatta
ENSDARG00000045484	dcp1b	87	54.128	ENSMNEG00000045219	DCP1B	69	71.698	Macaca_nemestrina
ENSDARG00000045484	dcp1b	87	53.799	ENSMLEG00000036414	DCP1B	69	71.698	Mandrillus_leucophaeus
ENSDARG00000045484	dcp1b	76	72.185	ENSMAMG00000010519	dcp1b	91	42.995	Mastacembelus_armatus
ENSDARG00000045484	dcp1b	97	54.492	ENSMZEG00005007893	dcp1b	99	54.476	Maylandia_zebra
ENSDARG00000045484	dcp1b	95	42.568	ENSMGAG00000013437	DCP1B	98	42.244	Meleagris_gallopavo
ENSDARG00000045484	dcp1b	61	49.848	ENSMAUG00000000763	Dcp1b	55	50.610	Mesocricetus_auratus
ENSDARG00000045484	dcp1b	99	41.818	ENSMICG00000005702	DCP1B	99	41.818	Microcebus_murinus
ENSDARG00000045484	dcp1b	61	48.788	ENSMOCG00000016799	Dcp1b	55	48.657	Microtus_ochrogaster
ENSDARG00000045484	dcp1b	86	54.407	ENSMODG00000018424	DCP1B	80	54.407	Monodelphis_domestica
ENSDARG00000045484	dcp1b	97	40.037	MGP_CAROLIEiJ_G0028789	Dcp1b	99	39.858	Mus_caroli
ENSDARG00000045484	dcp1b	96	40.367	ENSMUSG00000041477	Dcp1b	99	40.179	Mus_musculus
ENSDARG00000045484	dcp1b	97	38.420	MGP_PahariEiJ_G0022544	Dcp1b	99	38.462	Mus_pahari
ENSDARG00000045484	dcp1b	97	40.036	MGP_SPRETEiJ_G0029821	Dcp1b	99	39.859	Mus_spretus
ENSDARG00000045484	dcp1b	99	40.549	ENSMPUG00000018069	DCP1B	99	41.005	Mustela_putorius_furo
ENSDARG00000045484	dcp1b	71	53.704	ENSMLUG00000002252	DCP1B	78	53.704	Myotis_lucifugus
ENSDARG00000045484	dcp1b	63	50.298	ENSNGAG00000022519	Dcp1b	99	38.591	Nannospalax_galili
ENSDARG00000045484	dcp1b	97	53.965	ENSNBRG00000004185	dcp1b	89	81.720	Neolamprologus_brichardi
ENSDARG00000045484	dcp1b	87	54.740	ENSNLEG00000002698	DCP1B	89	71.698	Nomascus_leucogenys
ENSDARG00000045484	dcp1b	61	52.147	ENSMEUG00000003431	DCP1B	75	43.737	Notamacropus_eugenii
ENSDARG00000045484	dcp1b	88	69.430	ENSOPRG00000003721	DCP1B	87	69.430	Ochotona_princeps
ENSDARG00000045484	dcp1b	61	53.231	ENSOCUG00000011593	DCP1B	99	40.132	Oryctolagus_cuniculus
ENSDARG00000045484	dcp1b	77	56.250	ENSORLG00000014000	dcp1b	99	44.277	Oryzias_latipes
ENSDARG00000045484	dcp1b	77	57.292	ENSORLG00020016483	dcp1b	99	43.731	Oryzias_latipes_hni
ENSDARG00000045484	dcp1b	77	57.292	ENSORLG00015015461	dcp1b	85	74.775	Oryzias_latipes_hsok
ENSDARG00000045484	dcp1b	77	56.250	ENSOMEG00000009287	dcp1b	99	45.053	Oryzias_melastigma
ENSDARG00000045484	dcp1b	99	42.251	ENSOGAG00000031515	DCP1B	99	42.414	Otolemur_garnettii
ENSDARG00000045484	dcp1b	83	53.795	ENSOARG00000012960	DCP1B	99	42.301	Ovis_aries
ENSDARG00000045484	dcp1b	87	54.878	ENSPPAG00000031510	DCP1B	89	71.698	Pan_paniscus
ENSDARG00000045484	dcp1b	99	42.173	ENSPPRG00000023318	DCP1B	99	41.534	Panthera_pardus
ENSDARG00000045484	dcp1b	99	41.946	ENSPTIG00000021851	DCP1B	99	41.308	Panthera_tigris_altaica
ENSDARG00000045484	dcp1b	87	54.878	ENSPTRG00000004525	DCP1B	89	71.698	Pan_troglodytes
ENSDARG00000045484	dcp1b	87	52.836	ENSPANG00000008311	DCP1B	69	71.698	Papio_anubis
ENSDARG00000045484	dcp1b	100	50.814	ENSPKIG00000000520	dcp1b	100	52.260	Paramormyrops_kingsleyae
ENSDARG00000045484	dcp1b	95	44.839	ENSPSIG00000009160	DCP1B	98	44.371	Pelodiscus_sinensis
ENSDARG00000045484	dcp1b	99	38.693	ENSPEMG00000019470	Dcp1b	99	38.758	Peromyscus_maniculatus_bairdii
ENSDARG00000045484	dcp1b	99	42.652	ENSPCIG00000019743	DCP1B	99	43.087	Phascolarctos_cinereus
ENSDARG00000045484	dcp1b	84	56.250	ENSPFOG00000005090	dcp1b	98	45.366	Poecilia_formosa
ENSDARG00000045484	dcp1b	97	42.766	ENSPLAG00000005883	dcp1b	94	45.008	Poecilia_latipinna
ENSDARG00000045484	dcp1b	97	42.410	ENSPMEG00000001391	dcp1b	98	43.906	Poecilia_mexicana
ENSDARG00000045484	dcp1b	97	43.631	ENSPREG00000004280	dcp1b	98	44.937	Poecilia_reticulata
ENSDARG00000045484	dcp1b	72	51.587	ENSPPYG00000004145	DCP1B	78	51.587	Pongo_abelii
ENSDARG00000045484	dcp1b	88	61.538	ENSPCOG00000026128	DCP1B	98	61.538	Propithecus_coquereli
ENSDARG00000045484	dcp1b	61	53.918	ENSPVAG00000001978	DCP1B	52	54.037	Pteropus_vampyrus
ENSDARG00000045484	dcp1b	80	58.333	ENSPNYG00000020418	dcp1b	99	44.885	Pundamilia_nyererei
ENSDARG00000045484	dcp1b	89	52.743	ENSPNAG00000003792	dcp1b	93	52.743	Pygocentrus_nattereri
ENSDARG00000045484	dcp1b	60	49.538	ENSRNOG00000007340	Dcp1b	99	38.370	Rattus_norvegicus
ENSDARG00000045484	dcp1b	87	53.846	ENSRBIG00000032794	DCP1B	69	71.698	Rhinopithecus_bieti
ENSDARG00000045484	dcp1b	87	54.154	ENSRROG00000041000	DCP1B	69	71.698	Rhinopithecus_roxellana
ENSDARG00000045484	dcp1b	86	54.012	ENSSBOG00000033086	DCP1B	69	71.429	Saimiri_boliviensis_boliviensis
ENSDARG00000045484	dcp1b	87	40.325	ENSSHAG00000012569	DCP1B	99	40.506	Sarcophilus_harrisii
ENSDARG00000045484	dcp1b	64	59.064	ENSSFOG00015023556	dcp1b	100	52.120	Scleropages_formosus
ENSDARG00000045484	dcp1b	85	72.185	ENSSMAG00000000547	dcp1b	92	72.185	Scophthalmus_maximus
ENSDARG00000045484	dcp1b	77	72.848	ENSSDUG00000004916	dcp1b	92	72.848	Seriola_dumerili
ENSDARG00000045484	dcp1b	99	49.822	ENSSLDG00000008782	dcp1b	88	75.229	Seriola_lalandi_dorsalis
ENSDARG00000045484	dcp1b	97	43.772	ENSSSCG00000023976	-	92	71.963	Sus_scrofa
ENSDARG00000045484	dcp1b	86	58.170	ENSTGUG00000012575	DCP1B	80	58.170	Taeniopygia_guttata
ENSDARG00000045484	dcp1b	97	43.222	ENSTRUG00000016408	dcp1b	99	43.222	Takifugu_rubripes
ENSDARG00000045484	dcp1b	97	45.026	ENSTNIG00000007579	dcp1b	98	45.375	Tetraodon_nigroviridis
ENSDARG00000045484	dcp1b	72	50.403	ENSUMAG00000011668	DCP1B	77	50.806	Ursus_maritimus
ENSDARG00000045484	dcp1b	97	41.148	ENSVVUG00000020529	DCP1B	99	41.063	Vulpes_vulpes
ENSDARG00000045484	dcp1b	97	45.833	ENSXETG00000000899	dcp1b	98	45.648	Xenopus_tropicalis
ENSDARG00000045484	dcp1b	99	42.702	ENSXMAG00000011153	dcp1b	99	43.318	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	-	IEA	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0008047	enzyme activator activity	-	IEA	Function
GO:0031087	deadenylation-independent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0043085	positive regulation of catalytic activity	-	IEA	Process