EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000045680 (Gene tree)
Gene ID: 394062
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 18704 bases
Position: chr4:13586455-13605158
Accession: ZDB-GENE-040426-708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000156422	Xpo1	PF08389.12	1.5e-26	1	1
ENSDARP00000067160	Xpo1	PF08389.12	1.6e-26	1	1
ENSDARP00000120894	Xpo1	PF08389.12	1.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000067161	-	3794	-	ENSDARP00000067160	923 (aa)	-	Q7ZW13
ENSDART00000138201	-	3793	-	ENSDARP00000120894	922 (aa)	-	Q5RHV1
ENSDART00000144745	-	805	-	-	- (aa)	-	-
ENSDART00000187230	-	3130	-	ENSDARP00000156422	910 (aa)	-	A0A2R8QLV3

Gene Model

Click here to download ENSDARG00000045680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000045680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000045680	tnpo3	100	85.807	ENSG00000064419	TNPO3	100	86.083	Homo_sapiens
ENSDARG00000045680	tnpo3	100	92.633	ENSAPOG00000018347	tnpo3	100	92.633	Acanthochromis_polyacanthus
ENSDARG00000045680	tnpo3	99	82.773	ENSAMEG00000005135	TNPO3	98	82.773	Ailuropoda_melanoleuca
ENSDARG00000045680	tnpo3	96	90.600	ENSACIG00000005897	tnpo3	99	90.600	Amphilophus_citrinellus
ENSDARG00000045680	tnpo3	100	92.849	ENSAOCG00000008264	tnpo3	100	92.849	Amphiprion_ocellaris
ENSDARG00000045680	tnpo3	96	92.752	ENSAPEG00000024300	tnpo3	100	92.752	Amphiprion_percula
ENSDARG00000045680	tnpo3	100	91.224	ENSATEG00000003197	tnpo3	100	91.224	Anabas_testudineus
ENSDARG00000045680	tnpo3	73	82.459	ENSAPLG00000005946	TNPO3	91	82.459	Anas_platyrhynchos
ENSDARG00000045680	tnpo3	84	85.132	ENSACAG00000013470	TNPO3	95	85.132	Anolis_carolinensis
ENSDARG00000045680	tnpo3	100	85.807	ENSANAG00000037940	TNPO3	100	85.885	Aotus_nancymaae
ENSDARG00000045680	tnpo3	100	91.983	ENSACLG00000005561	tnpo3	100	91.983	Astatotilapia_calliptera
ENSDARG00000045680	tnpo3	100	91.874	ENSAMXG00000016236	tnpo3	100	91.874	Astyanax_mexicanus
ENSDARG00000045680	tnpo3	100	85.699	ENSBTAG00000004992	TNPO3	100	85.699	Bos_taurus
ENSDARG00000045680	tnpo3	100	85.915	ENSCJAG00000018085	TNPO3	100	86.083	Callithrix_jacchus
ENSDARG00000045680	tnpo3	100	85.807	ENSCAFG00000001543	TNPO3	100	85.807	Canis_familiaris
ENSDARG00000045680	tnpo3	100	85.807	ENSCAFG00020022462	TNPO3	99	85.405	Canis_lupus_dingo
ENSDARG00000045680	tnpo3	100	85.590	ENSCHIG00000011721	TNPO3	100	85.590	Capra_hircus
ENSDARG00000045680	tnpo3	100	85.699	ENSTSYG00000002989	TNPO3	100	86.083	Carlito_syrichta
ENSDARG00000045680	tnpo3	73	84.946	ENSCAPG00000005843	TNPO3	91	84.946	Cavia_aperea
ENSDARG00000045680	tnpo3	100	85.590	ENSCPOG00000039784	TNPO3	100	85.590	Cavia_porcellus
ENSDARG00000045680	tnpo3	100	85.915	ENSCCAG00000033826	TNPO3	100	86.083	Cebus_capucinus
ENSDARG00000045680	tnpo3	100	85.807	ENSCATG00000030018	TNPO3	100	86.083	Cercocebus_atys
ENSDARG00000045680	tnpo3	100	84.898	ENSCLAG00000016298	TNPO3	100	84.898	Chinchilla_lanigera
ENSDARG00000045680	tnpo3	100	85.699	ENSCSAG00000009966	TNPO3	100	85.699	Chlorocebus_sabaeus
ENSDARG00000045680	tnpo3	99	60.673	ENSCHOG00000011547	TNPO3	99	60.673	Choloepus_hoffmanni
ENSDARG00000045680	tnpo3	93	84.831	ENSCPBG00000017497	TNPO3	100	84.831	Chrysemys_picta_bellii
ENSDARG00000045680	tnpo3	99	49.346	ENSCING00000005042	-	99	49.346	Ciona_intestinalis
ENSDARG00000045680	tnpo3	99	48.092	ENSCSAVG00000008623	-	94	54.545	Ciona_savignyi
ENSDARG00000045680	tnpo3	100	85.807	ENSCANG00000033070	TNPO3	100	86.083	Colobus_angolensis_palliatus
ENSDARG00000045680	tnpo3	100	85.699	ENSCGRG00001015925	Tnpo3	100	85.699	Cricetulus_griseus_chok1gshd
ENSDARG00000045680	tnpo3	100	85.699	ENSCGRG00000010379	Tnpo3	100	85.699	Cricetulus_griseus_crigri
ENSDARG00000045680	tnpo3	100	89.924	ENSCSEG00000005952	tnpo3	100	89.924	Cynoglossus_semilaevis
ENSDARG00000045680	tnpo3	100	91.224	ENSCVAG00000020285	tnpo3	100	91.224	Cyprinodon_variegatus
ENSDARG00000045680	tnpo3	100	85.699	ENSDNOG00000002556	TNPO3	100	85.699	Dasypus_novemcinctus
ENSDARG00000045680	tnpo3	63	84.801	ENSDORG00000002433	Tnpo3	95	84.801	Dipodomys_ordii
ENSDARG00000045680	tnpo3	99	43.969	FBgn0031456	Tnpo-SR	99	43.811	Drosophila_melanogaster
ENSDARG00000045680	tnpo3	95	86.374	ENSETEG00000002101	TNPO3	90	86.374	Echinops_telfairi
ENSDARG00000045680	tnpo3	99	69.565	ENSEBUG00000016931	tnpo3	99	69.565	Eptatretus_burgeri
ENSDARG00000045680	tnpo3	100	85.807	ENSEASG00005008677	TNPO3	100	85.807	Equus_asinus_asinus
ENSDARG00000045680	tnpo3	100	85.807	ENSECAG00000012815	TNPO3	100	85.807	Equus_caballus
ENSDARG00000045680	tnpo3	67	30.403	ENSEEUG00000011681	IPO13	78	30.403	Erinaceus_europaeus
ENSDARG00000045680	tnpo3	99	80.745	ENSEEUG00000005178	TNPO3	98	80.745	Erinaceus_europaeus
ENSDARG00000045680	tnpo3	99	92.927	ENSELUG00000012153	tnpo3	99	92.927	Esox_lucius
ENSDARG00000045680	tnpo3	100	85.807	ENSFCAG00000018186	TNPO3	100	86.083	Felis_catus
ENSDARG00000045680	tnpo3	96	80.936	ENSFALG00000010667	TNPO3	100	80.936	Ficedula_albicollis
ENSDARG00000045680	tnpo3	100	85.405	ENSFDAG00000019578	TNPO3	100	85.405	Fukomys_damarensis
ENSDARG00000045680	tnpo3	99	90.761	ENSFHEG00000012859	tnpo3	99	90.761	Fundulus_heteroclitus
ENSDARG00000045680	tnpo3	100	91.333	ENSGMOG00000007324	tnpo3	100	91.333	Gadus_morhua
ENSDARG00000045680	tnpo3	62	84.276	ENSGALG00000039420	TNPO3	99	84.276	Gallus_gallus
ENSDARG00000045680	tnpo3	100	91.116	ENSGACG00000000699	tnpo3	100	91.116	Gasterosteus_aculeatus
ENSDARG00000045680	tnpo3	93	84.714	ENSGAGG00000006777	TNPO3	100	84.714	Gopherus_agassizii
ENSDARG00000045680	tnpo3	100	85.807	ENSGGOG00000008339	TNPO3	100	86.083	Gorilla_gorilla
ENSDARG00000045680	tnpo3	100	91.983	ENSHBUG00000008351	tnpo3	100	91.983	Haplochromis_burtoni
ENSDARG00000045680	tnpo3	100	85.915	ENSHGLG00000004463	TNPO3	100	85.915	Heterocephalus_glaber_female
ENSDARG00000045680	tnpo3	100	85.915	ENSHGLG00100005509	TNPO3	100	85.915	Heterocephalus_glaber_male
ENSDARG00000045680	tnpo3	100	89.599	ENSHCOG00000007221	tnpo3	100	89.599	Hippocampus_comes
ENSDARG00000045680	tnpo3	100	91.224	ENSIPUG00000014979	TNPO3	99	91.224	Ictalurus_punctatus
ENSDARG00000045680	tnpo3	100	85.699	ENSSTOG00000004885	TNPO3	100	85.699	Ictidomys_tridecemlineatus
ENSDARG00000045680	tnpo3	100	80.346	ENSJJAG00000013530	Tnpo3	100	80.346	Jaculus_jaculus
ENSDARG00000045680	tnpo3	100	90.791	ENSKMAG00000010497	tnpo3	100	90.791	Kryptolebias_marmoratus
ENSDARG00000045680	tnpo3	96	86.410	ENSLBEG00000011988	-	99	86.410	Labrus_bergylta
ENSDARG00000045680	tnpo3	96	88.788	ENSLBEG00000016595	tnpo3	100	88.788	Labrus_bergylta
ENSDARG00000045680	tnpo3	84	86.689	ENSLACG00000002351	TNPO3	99	86.689	Latimeria_chalumnae
ENSDARG00000045680	tnpo3	100	90.249	ENSLOCG00000015556	tnpo3	100	90.249	Lepisosteus_oculatus
ENSDARG00000045680	tnpo3	100	85.221	ENSLAFG00000002738	TNPO3	100	85.221	Loxodonta_africana
ENSDARG00000045680	tnpo3	100	85.807	ENSMFAG00000032385	TNPO3	100	86.083	Macaca_fascicularis
ENSDARG00000045680	tnpo3	100	85.807	ENSMMUG00000004311	TNPO3	100	86.083	Macaca_mulatta
ENSDARG00000045680	tnpo3	100	85.807	ENSMNEG00000045277	TNPO3	100	86.083	Macaca_nemestrina
ENSDARG00000045680	tnpo3	100	85.807	ENSMLEG00000037881	TNPO3	100	86.083	Mandrillus_leucophaeus
ENSDARG00000045680	tnpo3	100	91.983	ENSMAMG00000021096	tnpo3	100	91.983	Mastacembelus_armatus
ENSDARG00000045680	tnpo3	100	91.983	ENSMZEG00005015084	tnpo3	100	91.983	Maylandia_zebra
ENSDARG00000045680	tnpo3	80	81.103	ENSMGAG00000002839	TNPO3	99	81.103	Meleagris_gallopavo
ENSDARG00000045680	tnpo3	100	85.590	ENSMAUG00000013463	Tnpo3	100	85.590	Mesocricetus_auratus
ENSDARG00000045680	tnpo3	100	85.807	ENSMICG00000000140	TNPO3	100	86.083	Microcebus_murinus
ENSDARG00000045680	tnpo3	71	33.077	ENSMICG00000011003	IPO13	79	33.136	Microcebus_murinus
ENSDARG00000045680	tnpo3	100	85.699	ENSMOCG00000013264	Tnpo3	100	85.699	Microtus_ochrogaster
ENSDARG00000045680	tnpo3	100	91.224	ENSMMOG00000005887	tnpo3	100	91.224	Mola_mola
ENSDARG00000045680	tnpo3	100	86.024	ENSMODG00000014700	TNPO3	100	86.024	Monodelphis_domestica
ENSDARG00000045680	tnpo3	100	90.791	ENSMALG00000006675	tnpo3	100	90.791	Monopterus_albus
ENSDARG00000045680	tnpo3	100	85.590	MGP_CAROLIEiJ_G0028176	Tnpo3	100	85.590	Mus_caroli
ENSDARG00000045680	tnpo3	100	85.590	ENSMUSG00000012535	Tnpo3	100	85.590	Mus_musculus
ENSDARG00000045680	tnpo3	100	85.482	MGP_PahariEiJ_G0021934	Tnpo3	100	85.482	Mus_pahari
ENSDARG00000045680	tnpo3	100	85.482	MGP_SPRETEiJ_G0029176	Tnpo3	100	85.482	Mus_spretus
ENSDARG00000045680	tnpo3	100	85.807	ENSMPUG00000006021	TNPO3	100	85.807	Mustela_putorius_furo
ENSDARG00000045680	tnpo3	100	77.356	ENSMLUG00000000947	TNPO3	100	77.356	Myotis_lucifugus
ENSDARG00000045680	tnpo3	100	85.699	ENSNGAG00000008722	Tnpo3	100	85.699	Nannospalax_galili
ENSDARG00000045680	tnpo3	100	90.358	ENSNBRG00000019001	tnpo3	100	91.770	Neolamprologus_brichardi
ENSDARG00000045680	tnpo3	100	82.654	ENSNLEG00000012491	TNPO3	100	86.083	Nomascus_leucogenys
ENSDARG00000045680	tnpo3	92	71.516	ENSMEUG00000002445	TNPO3	91	71.516	Notamacropus_eugenii
ENSDARG00000045680	tnpo3	52	30.769	ENSMEUG00000002835	IPO13	61	30.769	Notamacropus_eugenii
ENSDARG00000045680	tnpo3	91	86.413	ENSOPRG00000006163	TNPO3	90	86.413	Ochotona_princeps
ENSDARG00000045680	tnpo3	99	85.588	ENSODEG00000012826	TNPO3	100	85.588	Octodon_degus
ENSDARG00000045680	tnpo3	100	92.199	ENSONIG00000007604	tnpo3	100	92.199	Oreochromis_niloticus
ENSDARG00000045680	tnpo3	95	82.628	ENSOANG00000011451	TNPO3	100	82.628	Ornithorhynchus_anatinus
ENSDARG00000045680	tnpo3	99	82.773	ENSOCUG00000010105	TNPO3	99	82.773	Oryctolagus_cuniculus
ENSDARG00000045680	tnpo3	100	90.574	ENSORLG00000029369	tnpo3	100	90.574	Oryzias_latipes
ENSDARG00000045680	tnpo3	100	90.574	ENSORLG00020003464	tnpo3	100	90.574	Oryzias_latipes_hni
ENSDARG00000045680	tnpo3	100	90.683	ENSORLG00015002610	tnpo3	100	90.683	Oryzias_latipes_hsok
ENSDARG00000045680	tnpo3	63	30.556	ENSOMEG00000001924	ipo13	86	30.556	Oryzias_melastigma
ENSDARG00000045680	tnpo3	100	91.008	ENSOMEG00000021006	tnpo3	100	91.008	Oryzias_melastigma
ENSDARG00000045680	tnpo3	100	85.915	ENSOGAG00000015340	TNPO3	100	85.915	Otolemur_garnettii
ENSDARG00000045680	tnpo3	100	85.590	ENSOARG00000004026	TNPO3	100	85.590	Ovis_aries
ENSDARG00000045680	tnpo3	100	85.807	ENSPPAG00000034975	TNPO3	100	86.083	Pan_paniscus
ENSDARG00000045680	tnpo3	100	85.807	ENSPPRG00000002050	TNPO3	100	86.083	Panthera_pardus
ENSDARG00000045680	tnpo3	100	85.807	ENSPTIG00000016167	TNPO3	100	86.083	Panthera_tigris_altaica
ENSDARG00000045680	tnpo3	100	85.807	ENSPTRG00000019676	TNPO3	100	86.083	Pan_troglodytes
ENSDARG00000045680	tnpo3	99	85.825	ENSPANG00000022226	TNPO3	100	86.083	Papio_anubis
ENSDARG00000045680	tnpo3	100	87.649	ENSPKIG00000023234	tnpo3	100	87.649	Paramormyrops_kingsleyae
ENSDARG00000045680	tnpo3	100	84.341	ENSPKIG00000008628	-	100	84.341	Paramormyrops_kingsleyae
ENSDARG00000045680	tnpo3	62	83.803	ENSPMGG00000009763	tnpo3	99	83.803	Periophthalmus_magnuspinnatus
ENSDARG00000045680	tnpo3	100	85.590	ENSPEMG00000000422	Tnpo3	100	85.590	Peromyscus_maniculatus_bairdii
ENSDARG00000045680	tnpo3	95	72.593	ENSPMAG00000008621	tnpo3	100	72.593	Petromyzon_marinus
ENSDARG00000045680	tnpo3	100	85.807	ENSPCIG00000011366	TNPO3	100	85.807	Phascolarctos_cinereus
ENSDARG00000045680	tnpo3	100	90.791	ENSPFOG00000013592	tnpo3	99	90.791	Poecilia_formosa
ENSDARG00000045680	tnpo3	100	90.791	ENSPLAG00000010188	tnpo3	100	90.791	Poecilia_latipinna
ENSDARG00000045680	tnpo3	100	90.899	ENSPMEG00000022731	tnpo3	100	90.899	Poecilia_mexicana
ENSDARG00000045680	tnpo3	100	85.807	ENSPPYG00000017990	TNPO3	100	85.807	Pongo_abelii
ENSDARG00000045680	tnpo3	99	76.600	ENSPCAG00000010158	TNPO3	98	76.600	Procavia_capensis
ENSDARG00000045680	tnpo3	87	85.855	ENSPCOG00000023901	TNPO3	96	85.855	Propithecus_coquereli
ENSDARG00000045680	tnpo3	99	80.042	ENSPVAG00000015757	TNPO3	98	80.042	Pteropus_vampyrus
ENSDARG00000045680	tnpo3	100	91.983	ENSPNYG00000002349	tnpo3	100	91.983	Pundamilia_nyererei
ENSDARG00000045680	tnpo3	100	92.958	ENSPNAG00000001142	tnpo3	100	92.958	Pygocentrus_nattereri
ENSDARG00000045680	tnpo3	100	85.699	ENSRNOG00000021758	Tnpo3	100	85.699	Rattus_norvegicus
ENSDARG00000045680	tnpo3	100	85.699	ENSRBIG00000042549	TNPO3	100	85.885	Rhinopithecus_bieti
ENSDARG00000045680	tnpo3	100	85.699	ENSRROG00000039264	TNPO3	100	85.885	Rhinopithecus_roxellana
ENSDARG00000045680	tnpo3	93	78.529	ENSSBOG00000029642	TNPO3	100	78.529	Saimiri_boliviensis_boliviensis
ENSDARG00000045680	tnpo3	96	86.070	ENSSHAG00000006837	TNPO3	100	86.070	Sarcophilus_harrisii
ENSDARG00000045680	tnpo3	99	86.062	ENSSFOG00015004256	tnpo3	100	84.829	Scleropages_formosus
ENSDARG00000045680	tnpo3	100	88.841	ENSSFOG00015001474	tnpo3	100	88.841	Scleropages_formosus
ENSDARG00000045680	tnpo3	100	91.766	ENSSMAG00000010422	tnpo3	97	91.766	Scophthalmus_maximus
ENSDARG00000045680	tnpo3	100	92.199	ENSSDUG00000004850	tnpo3	100	92.199	Seriola_dumerili
ENSDARG00000045680	tnpo3	100	92.199	ENSSLDG00000016927	tnpo3	100	92.199	Seriola_lalandi_dorsalis
ENSDARG00000045680	tnpo3	95	74.367	ENSSARG00000013893	TNPO3	98	74.367	Sorex_araneus
ENSDARG00000045680	tnpo3	99	80.239	ENSSPUG00000007457	TNPO3	99	80.282	Sphenodon_punctatus
ENSDARG00000045680	tnpo3	80	92.700	ENSSPAG00000014209	tnpo3	99	92.700	Stegastes_partitus
ENSDARG00000045680	tnpo3	100	85.807	ENSSSCG00000016572	TNPO3	100	85.807	Sus_scrofa
ENSDARG00000045680	tnpo3	100	89.309	ENSTNIG00000003347	tnpo3	100	89.309	Tetraodon_nigroviridis
ENSDARG00000045680	tnpo3	89	85.113	ENSTBEG00000007220	TNPO3	90	85.113	Tupaia_belangeri
ENSDARG00000045680	tnpo3	99	73.319	ENSTTRG00000014618	TNPO3	98	73.319	Tursiops_truncatus
ENSDARG00000045680	tnpo3	100	85.807	ENSUAMG00000021281	TNPO3	100	85.807	Ursus_americanus
ENSDARG00000045680	tnpo3	100	85.807	ENSUMAG00000006882	TNPO3	100	85.807	Ursus_maritimus
ENSDARG00000045680	tnpo3	85	72.615	ENSVPAG00000006166	TNPO3	88	72.615	Vicugna_pacos
ENSDARG00000045680	tnpo3	100	85.807	ENSVVUG00000011004	TNPO3	100	85.521	Vulpes_vulpes
ENSDARG00000045680	tnpo3	99	76.815	ENSXETG00000015009	tnpo3	99	76.815	Xenopus_tropicalis
ENSDARG00000045680	tnpo3	100	90.466	ENSXMAG00000013062	tnpo3	100	90.466	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006397	mRNA processing	27880902.	IMP	Process
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0008380	RNA splicing	27880902.	IMP	Process
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0030217	T cell differentiation	27880902.	IGI	Process
GO:0030217	T cell differentiation	27880902.	IMP	Process