EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000045691 (Gene tree)
Gene ID
550251
Gene Symbol
zcrb1
Alias
si:ch211-155a11.4|zgc:110711
Full Name
zinc finger CCHC-type and RNA binding motif 1
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
7582 bases
Position
chr4:13923927-13931508
Accession
ZDB-GENE-041210-114
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000067171zf-CCHCPF00098.234.8e-0511
ENSDARP00000067173zf-CCHCPF00098.234.8e-0511
ENSDARP00000067171RRM_1PF00076.221.2e-1611
ENSDARP00000067173RRM_1PF00076.221.2e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000067174-1100-ENSDARP00000067173218 (aa)-Q5SP50
ENSDART00000067172-2342-ENSDARP00000067171218 (aa)-Q5SP50
Gene Model
Click here to download ENSDARG00000045691's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000045691's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000045691zcrb110072.727ENSG00000139168ZCRB110080.451Homo_sapiens
ENSDARG00000045691zcrb110081.614ENSAPOG00000012709zcrb110081.166Acanthochromis_polyacanthus
ENSDARG00000045691zcrb110072.727ENSAMEG00000013837ZCRB110077.273Ailuropoda_melanoleuca
ENSDARG00000045691zcrb110083.636ENSACIG00000015990zcrb110084.091Amphilophus_citrinellus
ENSDARG00000045691zcrb110080.269ENSAOCG00000015798zcrb110079.821Amphiprion_ocellaris
ENSDARG00000045691zcrb110080.717ENSAPEG00000017955zcrb110080.269Amphiprion_percula
ENSDARG00000045691zcrb110071.233ENSATEG00000012544zcrb110070.776Anabas_testudineus
ENSDARG00000045691zcrb110076.444ENSAPLG00000004312ZCRB110073.333Anas_platyrhynchos
ENSDARG00000045691zcrb110074.545ENSACAG00000003172ZCRB110076.818Anolis_carolinensis
ENSDARG00000045691zcrb110072.727ENSANAG00000020058ZCRB110076.818Aotus_nancymaae
ENSDARG00000045691zcrb110079.186ENSACLG00000001060zcrb110080.995Astatotilapia_calliptera
ENSDARG00000045691zcrb110088.991ENSAMXG00000033790zcrb110088.991Astyanax_mexicanus
ENSDARG00000045691zcrb110071.818ENSBTAG00000018340-10075.909Bos_taurus
ENSDARG00000045691zcrb110072.273ENSBTAG00000019119ZCRB110076.818Bos_taurus
ENSDARG00000045691zcrb110072.727ENSCJAG00000017749ZCRB110076.818Callithrix_jacchus
ENSDARG00000045691zcrb110072.273ENSCAFG00000030751ZCRB110076.818Canis_familiaris
ENSDARG00000045691zcrb110072.273ENSCAFG00020010455ZCRB110076.818Canis_lupus_dingo
ENSDARG00000045691zcrb110066.364ENSCHIG00000012567-10070.455Capra_hircus
ENSDARG00000045691zcrb110072.273ENSCHIG00000010312-10076.818Capra_hircus
ENSDARG00000045691zcrb18166.298ENSTSYG00000025575-10071.823Carlito_syrichta
ENSDARG00000045691zcrb110072.727ENSTSYG00000010691-10077.273Carlito_syrichta
ENSDARG00000045691zcrb110055.455ENSTSYG00000026505-10055.046Carlito_syrichta
ENSDARG00000045691zcrb16665.035ENSCAPG00000011576-10055.245Cavia_aperea
ENSDARG00000045691zcrb110076.256ENSCPOG00000031127ZCRB110073.973Cavia_porcellus
ENSDARG00000045691zcrb17975.862ENSCCAG00000032546-8878.161Cebus_capucinus
ENSDARG00000045691zcrb16268.345ENSCCAG00000021693-7869.466Cebus_capucinus
ENSDARG00000045691zcrb15981.250ENSCCAG00000035450-8081.250Cebus_capucinus
ENSDARG00000045691zcrb110071.818ENSCATG00000028610ZCRB110075.909Cercocebus_atys
ENSDARG00000045691zcrb110075.342ENSCLAG00000002653ZCRB110074.886Chinchilla_lanigera
ENSDARG00000045691zcrb110072.727ENSCSAG00000007086ZCRB110077.273Chlorocebus_sabaeus
ENSDARG00000045691zcrb110059.545ENSCHOG00000004490ZCRB110064.545Choloepus_hoffmanni
ENSDARG00000045691zcrb19776.168ENSCPBG00000015507ZCRB19874.766Chrysemys_picta_bellii
ENSDARG00000045691zcrb19951.101ENSCING00000017297-9951.101Ciona_intestinalis
ENSDARG00000045691zcrb18446.875ENSCSAVG00000010693-9946.875Ciona_savignyi
ENSDARG00000045691zcrb110072.727ENSCANG00000042161ZCRB110076.818Colobus_angolensis_palliatus
ENSDARG00000045691zcrb110073.973ENSCGRG00001023392Zcrb110076.256Cricetulus_griseus_chok1gshd
ENSDARG00000045691zcrb110073.973ENSCGRG00000004778Zcrb110076.256Cricetulus_griseus_crigri
ENSDARG00000045691zcrb110078.995ENSCSEG00000010498zcrb110078.082Cynoglossus_semilaevis
ENSDARG00000045691zcrb110080.000ENSCVAG00000001057zcrb110083.636Cyprinodon_variegatus
ENSDARG00000045691zcrb16957.237ENSDNOG00000038480-9962.500Dasypus_novemcinctus
ENSDARG00000045691zcrb15977.519ENSDNOG00000049476-9176.712Dasypus_novemcinctus
ENSDARG00000045691zcrb110070.909ENSDNOG00000048722-10075.000Dasypus_novemcinctus
ENSDARG00000045691zcrb18170.225ENSDORG00000025789-10075.281Dipodomys_ordii
ENSDARG00000045691zcrb110048.165ENSDORG00000026623-10052.055Dipodomys_ordii
ENSDARG00000045691zcrb110068.468ENSETEG00000019302ZCRB110072.727Echinops_telfairi
ENSDARG00000045691zcrb19969.725ENSEBUG00000010289zcrb19968.807Eptatretus_burgeri
ENSDARG00000045691zcrb110076.818ENSEASG00005023491ZCRB19376.818Equus_asinus_asinus
ENSDARG00000045691zcrb110076.818ENSECAG00000012174ZCRB110076.818Equus_caballus
ENSDARG00000045691zcrb110067.580ENSEEUG00000000397ZCRB110070.776Erinaceus_europaeus
ENSDARG00000045691zcrb110083.710ENSELUG00000020877zcrb110083.710Esox_lucius
ENSDARG00000045691zcrb110072.273ENSFCAG00000014760-10076.818Felis_catus
ENSDARG00000045691zcrb15068.807ENSFCAG00000035062-7068.807Felis_catus
ENSDARG00000045691zcrb110075.342ENSFALG00000010262ZCRB110078.995Ficedula_albicollis
ENSDARG00000045691zcrb110075.799ENSFDAG00000013019-10074.429Fukomys_damarensis
ENSDARG00000045691zcrb110060.550ENSFDAG00000004074-10061.187Fukomys_damarensis
ENSDARG00000045691zcrb110053.425ENSFDAG00000003663-10051.142Fukomys_damarensis
ENSDARG00000045691zcrb110083.636ENSFHEG00000007426zcrb110084.091Fundulus_heteroclitus
ENSDARG00000045691zcrb110076.106ENSGMOG00000018788zcrb110075.221Gadus_morhua
ENSDARG00000045691zcrb110074.429ENSGALG00000009544ZCRB110078.539Gallus_gallus
ENSDARG00000045691zcrb110082.273ENSGAFG00000017414zcrb110083.182Gambusia_affinis
ENSDARG00000045691zcrb110077.027ENSGACG00000018860zcrb110078.829Gasterosteus_aculeatus
ENSDARG00000045691zcrb110077.727ENSGAGG00000008782ZCRB110076.364Gopherus_agassizii
ENSDARG00000045691zcrb110072.727ENSGGOG00000015647ZCRB110076.818Gorilla_gorilla
ENSDARG00000045691zcrb110057.658ENSGGOG00000043362-10062.011Gorilla_gorilla
ENSDARG00000045691zcrb110078.733ENSHBUG00000006367zcrb110080.543Haplochromis_burtoni
ENSDARG00000045691zcrb110062.844ENSHGLG00000006280-10065.138Heterocephalus_glaber_female
ENSDARG00000045691zcrb110075.799ENSHGLG00000001325-10075.342Heterocephalus_glaber_female
ENSDARG00000045691zcrb110063.014ENSHGLG00000008186-10063.014Heterocephalus_glaber_female
ENSDARG00000045691zcrb110065.753ENSHGLG00000006122-10065.297Heterocephalus_glaber_female
ENSDARG00000045691zcrb110070.776ENSHGLG00000007867-10070.320Heterocephalus_glaber_female
ENSDARG00000045691zcrb18166.854ENSHGLG00100015818-10065.730Heterocephalus_glaber_male
ENSDARG00000045691zcrb110062.844ENSHGLG00100012202-10065.138Heterocephalus_glaber_male
ENSDARG00000045691zcrb110071.689ENSHGLG00100019510-10071.233Heterocephalus_glaber_male
ENSDARG00000045691zcrb18160.452ENSHGLG00100012132-10059.322Heterocephalus_glaber_male
ENSDARG00000045691zcrb110065.297ENSHGLG00100009473-10065.297Heterocephalus_glaber_male
ENSDARG00000045691zcrb19752.995ENSHGLG00100017475-10052.336Heterocephalus_glaber_male
ENSDARG00000045691zcrb110074.661ENSHCOG00000009098zcrb110076.923Hippocampus_comes
ENSDARG00000045691zcrb15987.500ENSIPUG00000017007zcrb19087.500Ictalurus_punctatus
ENSDARG00000045691zcrb110072.273ENSSTOG00000023833-10076.364Ictidomys_tridecemlineatus
ENSDARG00000045691zcrb17975.287ENSSTOG00000034477-10078.161Ictidomys_tridecemlineatus
ENSDARG00000045691zcrb18159.322ENSJJAG00000020804-10055.932Jaculus_jaculus
ENSDARG00000045691zcrb110066.055ENSJJAG00000023083-10065.596Jaculus_jaculus
ENSDARG00000045691zcrb110072.273ENSJJAG00000021636-10076.818Jaculus_jaculus
ENSDARG00000045691zcrb18067.232ENSJJAG00000012365-9868.927Jaculus_jaculus
ENSDARG00000045691zcrb110081.818ENSKMAG00000012448zcrb110081.364Kryptolebias_marmoratus
ENSDARG00000045691zcrb110076.786ENSLBEG00000004257zcrb110079.464Labrus_bergylta
ENSDARG00000045691zcrb110056.109ENSLACG00000007970ZCRB110054.751Latimeria_chalumnae
ENSDARG00000045691zcrb110083.028ENSLOCG00000001409zcrb110083.028Lepisosteus_oculatus
ENSDARG00000045691zcrb110072.273ENSLAFG00000008847ZCRB110077.273Loxodonta_africana
ENSDARG00000045691zcrb110071.818ENSMFAG00000005490-10075.909Macaca_fascicularis
ENSDARG00000045691zcrb18771.354ENSMFAG00000039789ZCRB110076.042Macaca_fascicularis
ENSDARG00000045691zcrb15964.122ENSMFAG00000030462-7764.122Macaca_fascicularis
ENSDARG00000045691zcrb18170.391ENSMMUG00000017319ZCRB110075.419Macaca_mulatta
ENSDARG00000045691zcrb19959.174ENSMMUG00000041598-9955.505Macaca_mulatta
ENSDARG00000045691zcrb16082.443ENSMNEG00000041890-8782.031Macaca_nemestrina
ENSDARG00000045691zcrb19959.633ENSMNEG00000032137-9959.633Macaca_nemestrina
ENSDARG00000045691zcrb110071.364ENSMNEG00000001077-10075.455Macaca_nemestrina
ENSDARG00000045691zcrb19958.716ENSMLEG00000034590-9958.716Mandrillus_leucophaeus
ENSDARG00000045691zcrb110072.727ENSMLEG00000042951ZCRB110076.818Mandrillus_leucophaeus
ENSDARG00000045691zcrb110084.091ENSMAMG00000009034zcrb110084.091Mastacembelus_armatus
ENSDARG00000045691zcrb110079.186ENSMZEG00005010889zcrb110080.995Maylandia_zebra
ENSDARG00000045691zcrb110072.727ENSMGAG00000009450ZCRB110075.455Meleagris_gallopavo
ENSDARG00000045691zcrb110073.973ENSMAUG00000009266Zcrb110076.256Mesocricetus_auratus
ENSDARG00000045691zcrb110064.091ENSMICG00000026774-10065.909Microcebus_murinus
ENSDARG00000045691zcrb110072.273ENSMICG00000017422-10074.545Microcebus_murinus
ENSDARG00000045691zcrb110072.273ENSMOCG00000011009Zcrb110073.636Microtus_ochrogaster
ENSDARG00000045691zcrb110075.342ENSMMOG00000002395zcrb110072.936Mola_mola
ENSDARG00000045691zcrb110076.364ENSMODG00000006493-10076.364Monodelphis_domestica
ENSDARG00000045691zcrb19266.337ENSMODG00000008893-9470.297Monodelphis_domestica
ENSDARG00000045691zcrb110081.193ENSMALG00000016907zcrb18581.651Monopterus_albus
ENSDARG00000045691zcrb110071.818MGP_CAROLIEiJ_G0020191Zcrb110076.364Mus_caroli
ENSDARG00000045691zcrb110071.818ENSMUSG00000022635Zcrb110076.364Mus_musculus
ENSDARG00000045691zcrb110072.727MGP_PahariEiJ_G0020195Zcrb110077.273Mus_pahari
ENSDARG00000045691zcrb110071.818MGP_SPRETEiJ_G0021087Zcrb110076.364Mus_spretus
ENSDARG00000045691zcrb110072.273ENSMPUG00000000327-10076.818Mustela_putorius_furo
ENSDARG00000045691zcrb110067.265ENSMPUG00000000901-10069.507Mustela_putorius_furo
ENSDARG00000045691zcrb110055.895ENSMPUG00000005129-10055.217Mustela_putorius_furo
ENSDARG00000045691zcrb110071.818ENSMLUG00000001332-10076.364Myotis_lucifugus
ENSDARG00000045691zcrb110069.545ENSMLUG00000029416-10074.091Myotis_lucifugus
ENSDARG00000045691zcrb110072.477ENSMLUG00000026012-10074.312Myotis_lucifugus
ENSDARG00000045691zcrb110071.818ENSNGAG00000020193Zcrb110074.091Nannospalax_galili
ENSDARG00000045691zcrb110083.562ENSNBRG00000001430zcrb110082.192Neolamprologus_brichardi
ENSDARG00000045691zcrb110072.727ENSNLEG00000017944ZCRB110076.818Nomascus_leucogenys
ENSDARG00000045691zcrb18371.429ENSMEUG00000003563ZCRB110075.824Notamacropus_eugenii
ENSDARG00000045691zcrb18772.396ENSOPRG00000011095ZCRB110075.000Ochotona_princeps
ENSDARG00000045691zcrb110071.689ENSODEG00000003051-10071.233Octodon_degus
ENSDARG00000045691zcrb19972.350ENSODEG00000018576-9371.889Octodon_degus
ENSDARG00000045691zcrb110072.146ENSODEG00000019971-10071.233Octodon_degus
ENSDARG00000045691zcrb18156.180ENSODEG00000000147-10056.180Octodon_degus
ENSDARG00000045691zcrb110068.349ENSODEG00000007573-10067.431Octodon_degus
ENSDARG00000045691zcrb110081.982ENSONIG00000016844zcrb110080.631Oreochromis_niloticus
ENSDARG00000045691zcrb110072.273ENSOANG00000009891ZCRB110074.091Ornithorhynchus_anatinus
ENSDARG00000045691zcrb110067.890ENSOCUG00000026539-10067.890Oryctolagus_cuniculus
ENSDARG00000045691zcrb18365.934ENSOCUG00000013664-10067.582Oryctolagus_cuniculus
ENSDARG00000045691zcrb19978.802ENSORLG00000013088zcrb19882.488Oryzias_latipes
ENSDARG00000045691zcrb19978.802ENSORLG00020019676zcrb19882.488Oryzias_latipes_hni
ENSDARG00000045691zcrb19978.802ENSORLG00015017998zcrb18380.645Oryzias_latipes_hsok
ENSDARG00000045691zcrb110078.182ENSOMEG00000011896zcrb110081.818Oryzias_melastigma
ENSDARG00000045691zcrb110069.091ENSOGAG00000026881-10072.727Otolemur_garnettii
ENSDARG00000045691zcrb110063.761ENSOGAG00000031462-10065.138Otolemur_garnettii
ENSDARG00000045691zcrb110076.364ENSOGAG00000013178-10076.364Otolemur_garnettii
ENSDARG00000045691zcrb110072.273ENSOARG00000004530-10076.818Ovis_aries
ENSDARG00000045691zcrb110072.273ENSOARG00000019797-10076.818Ovis_aries
ENSDARG00000045691zcrb110071.818ENSOARG00000000782-10074.545Ovis_aries
ENSDARG00000045691zcrb110058.182ENSPPAG00000041848-10061.364Pan_paniscus
ENSDARG00000045691zcrb110072.727ENSPPAG00000030593ZCRB110076.818Pan_paniscus
ENSDARG00000045691zcrb110072.273ENSPPRG00000003066-10076.818Panthera_pardus
ENSDARG00000045691zcrb110072.273ENSPTIG00000018037ZCRB110076.818Panthera_tigris_altaica
ENSDARG00000045691zcrb110072.727ENSPTRG00000004838ZCRB110076.818Pan_troglodytes
ENSDARG00000045691zcrb110056.306ENSPTRG00000045111-10059.459Pan_troglodytes
ENSDARG00000045691zcrb19959.817ENSPANG00000031708-9960.274Papio_anubis
ENSDARG00000045691zcrb110072.727ENSPANG00000010274ZCRB110076.818Papio_anubis
ENSDARG00000045691zcrb110086.239ENSPKIG00000006587zcrb110086.239Paramormyrops_kingsleyae
ENSDARG00000045691zcrb110077.727ENSPSIG00000014606ZCRB110076.364Pelodiscus_sinensis
ENSDARG00000045691zcrb110077.376ENSPMGG00000007605zcrb110076.923Periophthalmus_magnuspinnatus
ENSDARG00000045691zcrb110072.727ENSPEMG00000005293Zcrb110075.000Peromyscus_maniculatus_bairdii
ENSDARG00000045691zcrb18965.816ENSPMAG00000001258zcrb19966.495Petromyzon_marinus
ENSDARG00000045691zcrb110072.727ENSPCIG00000029300-10076.364Phascolarctos_cinereus
ENSDARG00000045691zcrb110082.727ENSPFOG00000015564zcrb110084.091Poecilia_formosa
ENSDARG00000045691zcrb110082.273ENSPLAG00000004685zcrb110083.636Poecilia_latipinna
ENSDARG00000045691zcrb110082.727ENSPMEG00000005524zcrb110084.091Poecilia_mexicana
ENSDARG00000045691zcrb110078.082ENSPREG00000011402zcrb110078.995Poecilia_reticulata
ENSDARG00000045691zcrb110072.727ENSPPYG00000004422ZCRB110076.818Pongo_abelii
ENSDARG00000045691zcrb110069.091ENSPCAG00000011749ZCRB110076.364Procavia_capensis
ENSDARG00000045691zcrb110072.727ENSPCOG00000022958ZCRB110077.273Propithecus_coquereli
ENSDARG00000045691zcrb18370.109ENSPVAG00000006651ZCRB110074.457Pteropus_vampyrus
ENSDARG00000045691zcrb110083.105ENSPNYG00000008344zcrb110081.735Pundamilia_nyererei
ENSDARG00000045691zcrb110086.239ENSPNAG00000023955zcrb110086.239Pygocentrus_nattereri
ENSDARG00000045691zcrb110072.727ENSRNOG00000004996Zcrb110077.273Rattus_norvegicus
ENSDARG00000045691zcrb110072.273ENSRBIG00000042559ZCRB110076.364Rhinopithecus_bieti
ENSDARG00000045691zcrb110072.727ENSRROG00000033546ZCRB110076.818Rhinopithecus_roxellana
ENSDARG00000045691zcrb15969.531ENSSBOG00000022234-7869.355Saimiri_boliviensis_boliviensis
ENSDARG00000045691zcrb110072.727ENSSBOG00000019523ZCRB110076.818Saimiri_boliviensis_boliviensis
ENSDARG00000045691zcrb110073.182ENSSHAG00000006273ZCRB110076.818Sarcophilus_harrisii
ENSDARG00000045691zcrb110080.365ENSSFOG00015005150zcrb110079.909Scleropages_formosus
ENSDARG00000045691zcrb110080.455ENSSMAG00000020477zcrb110080.000Scophthalmus_maximus
ENSDARG00000045691zcrb110081.696ENSSDUG00000007140zcrb110079.911Seriola_dumerili
ENSDARG00000045691zcrb110078.182ENSSLDG00000012143zcrb110076.364Seriola_lalandi_dorsalis
ENSDARG00000045691zcrb18763.542ENSSARG00000000492ZCRB110068.750Sorex_araneus
ENSDARG00000045691zcrb18175.978ENSSPUG00000009960ZCRB110077.095Sphenodon_punctatus
ENSDARG00000045691zcrb110083.482ENSSPAG00000013412zcrb110081.696Stegastes_partitus
ENSDARG00000045691zcrb110055.505ENSSSCG00000033618-10055.505Sus_scrofa
ENSDARG00000045691zcrb110071.818ENSSSCG00000034066-10075.909Sus_scrofa
ENSDARG00000045691zcrb110075.799ENSTGUG00000005829ZCRB110078.995Taeniopygia_guttata
ENSDARG00000045691zcrb110079.091ENSTRUG00000016764zcrb110079.091Takifugu_rubripes
ENSDARG00000045691zcrb110074.439ENSTNIG00000018504zcrb110072.851Tetraodon_nigroviridis
ENSDARG00000045691zcrb110062.727ENSTBEG00000008097ZCRB110061.818Tupaia_belangeri
ENSDARG00000045691zcrb110071.818ENSTTRG00000001378ZCRB110075.909Tursiops_truncatus
ENSDARG00000045691zcrb110072.727ENSUMAG00000024199ZCRB110077.273Ursus_maritimus
ENSDARG00000045691zcrb110071.818ENSVPAG00000012040ZCRB110075.909Vicugna_pacos
ENSDARG00000045691zcrb110072.273ENSVVUG00000016801ZCRB110076.818Vulpes_vulpes
ENSDARG00000045691zcrb110076.364ENSXETG00000006796zcrb110076.364Xenopus_tropicalis
ENSDARG00000045691zcrb16883.784ENSXCOG00000014895zcrb19884.828Xiphophorus_couchianus
ENSDARG00000045691zcrb110081.818ENSXMAG00000009359zcrb110082.192Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome21873635.IBAProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0005689U12-type spliceosomal complex21873635.IBAComponent
GO:0006397mRNA processing-IEAProcess
GO:0008270zinc ion binding-IEAFunction
GO:0008380RNA splicing-IEAProcess
GO:0046872metal ion binding-IEAFunction

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