EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000045696 (Gene tree)
Gene ID: 415142
Gene Symbol: mrpl23
Alias: zgc:86630
Full Name: mitochondrial ribosomal protein L23
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 38481 bases
Position: chr25:23777469-23815949
Accession: ZDB-GENE-040625-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000067178	Ribosomal_L23	PF00276.20	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000067179	-	1119	-	ENSDARP00000067178	153 (aa)	-	Q6IQS9

Gene Model

Click here to download ENSDARG00000045696's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000045696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000045696	mrpl23	100	61.438	ENSG00000214026	MRPL23	100	61.438	Homo_sapiens
ENSDARG00000045696	mrpl23	98	80.000	ENSAPOG00000013198	mrpl23	97	80.000	Acanthochromis_polyacanthus
ENSDARG00000045696	mrpl23	100	63.226	ENSAMEG00000002153	-	100	63.226	Ailuropoda_melanoleuca
ENSDARG00000045696	mrpl23	100	78.431	ENSACIG00000024327	mrpl23	100	78.431	Amphilophus_citrinellus
ENSDARG00000045696	mrpl23	98	80.000	ENSAOCG00000013679	mrpl23	97	80.000	Amphiprion_ocellaris
ENSDARG00000045696	mrpl23	98	80.000	ENSAPEG00000010298	mrpl23	97	80.000	Amphiprion_percula
ENSDARG00000045696	mrpl23	99	80.921	ENSATEG00000019314	mrpl23	99	80.921	Anabas_testudineus
ENSDARG00000045696	mrpl23	75	60.870	ENSAPLG00000012955	-	100	60.870	Anas_platyrhynchos
ENSDARG00000045696	mrpl23	61	64.894	ENSACAG00000009700	-	99	64.894	Anolis_carolinensis
ENSDARG00000045696	mrpl23	96	63.265	ENSANAG00000010507	-	97	63.265	Aotus_nancymaae
ENSDARG00000045696	mrpl23	98	79.333	ENSACLG00000002565	mrpl23	97	79.333	Astatotilapia_calliptera
ENSDARG00000045696	mrpl23	65	88.000	ENSAMXG00000016759	mrpl23	97	63.810	Astyanax_mexicanus
ENSDARG00000045696	mrpl23	86	50.746	ENSBTAG00000000103	MRPL23	100	57.547	Bos_taurus
ENSDARG00000045696	mrpl23	67	37.500	WBGene00020348	mrpl-23	70	37.500	Caenorhabditis_elegans
ENSDARG00000045696	mrpl23	100	63.399	ENSCAFG00000010086	-	100	63.399	Canis_familiaris
ENSDARG00000045696	mrpl23	100	63.399	ENSCAFG00020017439	-	100	63.399	Canis_lupus_dingo
ENSDARG00000045696	mrpl23	100	62.092	ENSCHIG00000019224	-	100	62.092	Capra_hircus
ENSDARG00000045696	mrpl23	98	63.333	ENSTSYG00000030664	-	99	63.333	Carlito_syrichta
ENSDARG00000045696	mrpl23	96	51.020	ENSCAPG00000012400	-	100	51.020	Cavia_aperea
ENSDARG00000045696	mrpl23	100	61.438	ENSCPOG00000035162	-	100	61.438	Cavia_porcellus
ENSDARG00000045696	mrpl23	100	62.987	ENSCCAG00000021662	-	100	62.987	Cebus_capucinus
ENSDARG00000045696	mrpl23	100	61.438	ENSCATG00000019817	-	95	61.438	Cercocebus_atys
ENSDARG00000045696	mrpl23	100	63.871	ENSCATG00000037780	-	100	63.871	Cercocebus_atys
ENSDARG00000045696	mrpl23	100	60.131	ENSCLAG00000015446	-	100	60.131	Chinchilla_lanigera
ENSDARG00000045696	mrpl23	100	62.745	ENSCSAG00000009837	-	100	62.745	Chlorocebus_sabaeus
ENSDARG00000045696	mrpl23	96	63.514	ENSCSAG00000019043	-	96	63.514	Chlorocebus_sabaeus
ENSDARG00000045696	mrpl23	99	73.026	ENSCPBG00000007389	-	99	73.026	Chrysemys_picta_bellii
ENSDARG00000045696	mrpl23	69	36.036	ENSCING00000002791	-	77	32.847	Ciona_intestinalis
ENSDARG00000045696	mrpl23	96	63.946	ENSCANG00000032318	-	100	63.946	Colobus_angolensis_palliatus
ENSDARG00000045696	mrpl23	100	60.784	ENSCGRG00001000462	Mrpl23	100	60.784	Cricetulus_griseus_chok1gshd
ENSDARG00000045696	mrpl23	100	60.784	ENSCGRG00000002207	Mrpl23	100	60.784	Cricetulus_griseus_crigri
ENSDARG00000045696	mrpl23	98	76.667	ENSCSEG00000008738	mrpl23	100	77.027	Cynoglossus_semilaevis
ENSDARG00000045696	mrpl23	98	79.333	ENSCVAG00000002822	mrpl23	97	79.333	Cyprinodon_variegatus
ENSDARG00000045696	mrpl23	99	53.947	ENSDNOG00000047306	-	99	53.947	Dasypus_novemcinctus
ENSDARG00000045696	mrpl23	100	59.355	ENSDORG00000027504	Mrpl23	100	60.417	Dipodomys_ordii
ENSDARG00000045696	mrpl23	96	47.651	FBgn0035335	mRpL23	97	47.651	Drosophila_melanogaster
ENSDARG00000045696	mrpl23	97	65.789	ENSEASG00005000456	-	54	66.667	Equus_asinus_asinus
ENSDARG00000045696	mrpl23	100	65.385	ENSECAG00000024486	-	53	65.385	Equus_caballus
ENSDARG00000045696	mrpl23	100	85.621	ENSELUG00000022256	RM23	100	85.621	Esox_lucius
ENSDARG00000045696	mrpl23	100	63.871	ENSFCAG00000018795	-	100	63.871	Felis_catus
ENSDARG00000045696	mrpl23	95	69.655	ENSFALG00000011598	-	95	70.068	Ficedula_albicollis
ENSDARG00000045696	mrpl23	100	62.092	ENSFDAG00000013606	-	100	62.092	Fukomys_damarensis
ENSDARG00000045696	mrpl23	98	79.333	ENSFHEG00000010978	mrpl23	92	80.272	Fundulus_heteroclitus
ENSDARG00000045696	mrpl23	95	76.552	ENSGMOG00000004509	mrpl23	100	76.552	Gadus_morhua
ENSDARG00000045696	mrpl23	100	67.974	ENSGALG00000006561	-	71	67.974	Gallus_gallus
ENSDARG00000045696	mrpl23	99	81.579	ENSGAFG00000021827	mrpl23	99	81.579	Gambusia_affinis
ENSDARG00000045696	mrpl23	98	80.667	ENSGACG00000011130	mrpl23	97	80.667	Gasterosteus_aculeatus
ENSDARG00000045696	mrpl23	99	73.026	ENSGAGG00000023827	-	99	73.026	Gopherus_agassizii
ENSDARG00000045696	mrpl23	96	63.265	ENSGGOG00000000333	-	83	63.265	Gorilla_gorilla
ENSDARG00000045696	mrpl23	98	79.333	ENSHBUG00000023397	mrpl23	97	79.333	Haplochromis_burtoni
ENSDARG00000045696	mrpl23	100	61.438	ENSHGLG00000016722	-	100	61.438	Heterocephalus_glaber_female
ENSDARG00000045696	mrpl23	100	61.438	ENSHGLG00100003075	-	100	61.438	Heterocephalus_glaber_male
ENSDARG00000045696	mrpl23	98	79.333	ENSHCOG00000009092	mrpl23	97	79.333	Hippocampus_comes
ENSDARG00000045696	mrpl23	100	86.928	ENSIPUG00000005383	mrpl23	100	86.928	Ictalurus_punctatus
ENSDARG00000045696	mrpl23	100	60.131	ENSSTOG00000024573	-	100	60.131	Ictidomys_tridecemlineatus
ENSDARG00000045696	mrpl23	100	60.131	ENSJJAG00000003519	Mrpl23	100	60.131	Jaculus_jaculus
ENSDARG00000045696	mrpl23	99	75.658	ENSKMAG00000001599	mrpl23	99	75.658	Kryptolebias_marmoratus
ENSDARG00000045696	mrpl23	98	79.333	ENSLBEG00000002580	mrpl23	97	79.333	Labrus_bergylta
ENSDARG00000045696	mrpl23	100	74.510	ENSLACG00000011528	mrpl23	100	74.510	Latimeria_chalumnae
ENSDARG00000045696	mrpl23	100	86.275	ENSLOCG00000001825	mrpl23	100	86.275	Lepisosteus_oculatus
ENSDARG00000045696	mrpl23	100	64.052	ENSMFAG00000034529	-	100	64.052	Macaca_fascicularis
ENSDARG00000045696	mrpl23	71	62.963	ENSMFAG00000039715	-	100	62.963	Macaca_fascicularis
ENSDARG00000045696	mrpl23	100	63.399	ENSMMUG00000031268	MRPL23	100	63.399	Macaca_mulatta
ENSDARG00000045696	mrpl23	71	63.889	ENSMNEG00000033446	-	100	63.889	Macaca_nemestrina
ENSDARG00000045696	mrpl23	100	63.399	ENSMNEG00000036690	-	100	63.399	Macaca_nemestrina
ENSDARG00000045696	mrpl23	100	62.581	ENSMLEG00000015767	-	100	64.626	Mandrillus_leucophaeus
ENSDARG00000045696	mrpl23	99	79.605	ENSMAMG00000003609	mrpl23	99	79.605	Mastacembelus_armatus
ENSDARG00000045696	mrpl23	98	79.333	ENSMZEG00005017456	mrpl23	97	79.333	Maylandia_zebra
ENSDARG00000045696	mrpl23	99	66.447	ENSMGAG00000007978	-	100	66.447	Meleagris_gallopavo
ENSDARG00000045696	mrpl23	96	59.864	ENSMAUG00000018693	Mrpl23	100	59.864	Mesocricetus_auratus
ENSDARG00000045696	mrpl23	96	67.347	ENSMICG00000042091	-	94	67.347	Microcebus_murinus
ENSDARG00000045696	mrpl23	100	60.784	ENSMOCG00000018436	Mrpl23	100	60.784	Microtus_ochrogaster
ENSDARG00000045696	mrpl23	97	80.537	ENSMMOG00000018097	mrpl23	96	80.537	Mola_mola
ENSDARG00000045696	mrpl23	100	66.013	ENSMODG00000003437	-	100	66.013	Monodelphis_domestica
ENSDARG00000045696	mrpl23	97	78.378	ENSMALG00000014571	mrpl23	100	78.378	Monopterus_albus
ENSDARG00000045696	mrpl23	100	61.438	MGP_CAROLIEiJ_G0030727	Mrpl23	100	61.438	Mus_caroli
ENSDARG00000045696	mrpl23	100	60.784	ENSMUSG00000037772	Mrpl23	100	60.784	Mus_musculus
ENSDARG00000045696	mrpl23	100	59.477	MGP_PahariEiJ_G0013923	Mrpl23	100	59.477	Mus_pahari
ENSDARG00000045696	mrpl23	100	61.438	MGP_SPRETEiJ_G0031836	Mrpl23	100	61.438	Mus_spretus
ENSDARG00000045696	mrpl23	100	58.710	ENSMPUG00000002923	-	99	58.710	Mustela_putorius_furo
ENSDARG00000045696	mrpl23	96	66.225	ENSMPUG00000005658	-	96	66.887	Mustela_putorius_furo
ENSDARG00000045696	mrpl23	80	62.295	ENSNGAG00000012877	-	89	62.295	Nannospalax_galili
ENSDARG00000045696	mrpl23	100	60.784	ENSNGAG00000023444	-	100	61.905	Nannospalax_galili
ENSDARG00000045696	mrpl23	98	80.000	ENSNBRG00000007183	mrpl23	97	80.000	Neolamprologus_brichardi
ENSDARG00000045696	mrpl23	100	62.092	ENSNLEG00000026950	-	100	62.092	Nomascus_leucogenys
ENSDARG00000045696	mrpl23	63	63.918	ENSOPRG00000018353	-	71	63.918	Ochotona_princeps
ENSDARG00000045696	mrpl23	99	54.902	ENSODEG00000012131	-	99	54.902	Octodon_degus
ENSDARG00000045696	mrpl23	96	64.189	ENSODEG00000017262	-	96	64.189	Octodon_degus
ENSDARG00000045696	mrpl23	100	78.431	ENSONIG00000014500	mrpl23	96	78.431	Oreochromis_niloticus
ENSDARG00000045696	mrpl23	97	79.195	ENSORLG00000025383	mrpl23	97	79.195	Oryzias_latipes
ENSDARG00000045696	mrpl23	99	77.483	ENSORLG00020008379	mrpl23	98	77.483	Oryzias_latipes_hni
ENSDARG00000045696	mrpl23	97	77.181	ENSOMEG00000019132	mrpl23	77	77.181	Oryzias_melastigma
ENSDARG00000045696	mrpl23	100	64.052	ENSOGAG00000029988	-	100	64.052	Otolemur_garnettii
ENSDARG00000045696	mrpl23	90	60.870	ENSOARG00000000706	-	86	60.870	Ovis_aries
ENSDARG00000045696	mrpl23	100	62.092	ENSPPAG00000034414	-	100	62.092	Pan_paniscus
ENSDARG00000045696	mrpl23	99	63.636	ENSPPRG00000013232	-	100	63.636	Panthera_pardus
ENSDARG00000045696	mrpl23	100	62.092	ENSPTRG00000033746	MRPL23	100	62.092	Pan_troglodytes
ENSDARG00000045696	mrpl23	100	64.052	ENSPANG00000018813	-	100	64.052	Papio_anubis
ENSDARG00000045696	mrpl23	100	81.699	ENSPKIG00000001102	mrpl23	100	81.699	Paramormyrops_kingsleyae
ENSDARG00000045696	mrpl23	84	74.219	ENSPSIG00000012834	-	100	74.219	Pelodiscus_sinensis
ENSDARG00000045696	mrpl23	93	76.761	ENSPMGG00000006407	mrpl23	96	76.761	Periophthalmus_magnuspinnatus
ENSDARG00000045696	mrpl23	100	56.863	ENSPEMG00000018572	Mrpl23	100	60.784	Peromyscus_maniculatus_bairdii
ENSDARG00000045696	mrpl23	100	64.286	ENSPMAG00000005259	mrpl23	100	64.286	Petromyzon_marinus
ENSDARG00000045696	mrpl23	68	68.269	ENSPCIG00000027047	-	65	68.269	Phascolarctos_cinereus
ENSDARG00000045696	mrpl23	98	83.333	ENSPFOG00000014159	mrpl23	97	83.333	Poecilia_formosa
ENSDARG00000045696	mrpl23	99	83.444	ENSPLAG00000023456	mrpl23	99	83.444	Poecilia_latipinna
ENSDARG00000045696	mrpl23	98	82.667	ENSPMEG00000012252	mrpl23	97	82.667	Poecilia_mexicana
ENSDARG00000045696	mrpl23	98	82.000	ENSPREG00000019951	mrpl23	97	82.000	Poecilia_reticulata
ENSDARG00000045696	mrpl23	100	60.784	ENSPPYG00000002918	-	100	60.784	Pongo_abelii
ENSDARG00000045696	mrpl23	96	64.626	ENSPCOG00000026555	-	100	64.626	Propithecus_coquereli
ENSDARG00000045696	mrpl23	61	67.742	ENSPVAG00000000331	-	61	67.742	Pteropus_vampyrus
ENSDARG00000045696	mrpl23	98	80.000	ENSPNYG00000015541	mrpl23	97	80.000	Pundamilia_nyererei
ENSDARG00000045696	mrpl23	100	92.157	ENSPNAG00000010548	mrpl23	100	92.157	Pygocentrus_nattereri
ENSDARG00000045696	mrpl23	100	60.131	ENSRNOG00000020354	Mrpl23	100	60.131	Rattus_norvegicus
ENSDARG00000045696	mrpl23	100	63.399	ENSRBIG00000041638	-	100	63.399	Rhinopithecus_bieti
ENSDARG00000045696	mrpl23	100	62.581	ENSRROG00000004661	-	100	64.626	Rhinopithecus_roxellana
ENSDARG00000045696	mrpl23	96	63.514	ENSSBOG00000025338	-	81	63.514	Saimiri_boliviensis_boliviensis
ENSDARG00000045696	mrpl23	96	65.986	ENSSHAG00000002716	-	100	65.986	Sarcophilus_harrisii
ENSDARG00000045696	mrpl23	100	83.660	ENSSFOG00015002519	mrpl23	100	83.660	Scleropages_formosus
ENSDARG00000045696	mrpl23	100	77.419	ENSSMAG00000009264	mrpl23	100	77.419	Scophthalmus_maximus
ENSDARG00000045696	mrpl23	97	81.757	ENSSDUG00000019634	mrpl23	100	81.757	Seriola_dumerili
ENSDARG00000045696	mrpl23	98	80.667	ENSSLDG00000012055	mrpl23	97	80.667	Seriola_lalandi_dorsalis
ENSDARG00000045696	mrpl23	100	63.399	ENSSPUG00000002656	-	100	63.399	Sphenodon_punctatus
ENSDARG00000045696	mrpl23	96	84.354	ENSSPAG00000001601	mrpl23	99	84.354	Stegastes_partitus
ENSDARG00000045696	mrpl23	100	63.636	ENSSSCG00000038364	-	100	63.636	Sus_scrofa
ENSDARG00000045696	mrpl23	96	67.347	ENSTGUG00000009338	MRPL23	100	67.347	Taeniopygia_guttata
ENSDARG00000045696	mrpl23	98	79.333	ENSTRUG00000009637	mrpl23	97	79.333	Takifugu_rubripes
ENSDARG00000045696	mrpl23	61	79.570	ENSTNIG00000010463	mrpl23	100	79.570	Tetraodon_nigroviridis
ENSDARG00000045696	mrpl23	61	68.817	ENSTTRG00000009281	-	56	68.817	Tursiops_truncatus
ENSDARG00000045696	mrpl23	96	65.101	ENSUAMG00000020867	-	96	65.101	Ursus_americanus
ENSDARG00000045696	mrpl23	96	65.101	ENSUMAG00000006227	-	82	65.101	Ursus_maritimus
ENSDARG00000045696	mrpl23	96	63.265	ENSVVUG00000002581	-	75	63.265	Vulpes_vulpes
ENSDARG00000045696	mrpl23	100	74.510	ENSXETG00000014017	mrpl23	100	74.510	Xenopus_tropicalis
ENSDARG00000045696	mrpl23	98	71.523	ENSXCOG00000020628	mrpl23	99	71.523	Xiphophorus_couchianus
ENSDARG00000045696	mrpl23	98	81.333	ENSXMAG00000015496	mrpl23	97	81.333	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISS	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0032543	mitochondrial translation	21873635.	IBA	Process